Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: PVM


Organism: Rhodopirellula sp. SWK7. Bacteria; Planctomycetes; Planctomycetia; Planctomycetales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       RRSWK_05718 (fasta)
        RRSWK_05719 (fasta)
                     RRSWK_05720 (fasta)
                         RRSWK_05721 (fasta)
                          RRSWK_05722 (fasta)
                           RRSWK_05723 (fasta)
                                                        RRSWK_05724 (fasta)
                                                          RRSWK_05725 (fasta)
                                                                 RRSWK_05726 (fasta) HMM02866_1_pvmeut PVM (details)
                                                                        RRSWK_05727 (fasta) HMMaldol_2_pvm1 PVM (details)
                                                                          RRSWK_05728 (fasta) P_adobe PVM (details)
                                                                               RRSWK_05729 (fasta) HMM02441_01 PVM (details)
                                                                                 RRSWK_05730 (fasta) P_slate PVM (details)
                                                                                            RRSWK_05731 (fasta) HMMalddh_1_eutpdugrm PVM (details)
                                                                                              RRSWK_05732 (fasta) P_dirtyPink PVM (details)
                                                                                                        RRSWK_05733 (fasta) HMMacetkin_1 PVM (details)
                                                                                                          RRSWK_05734 (fasta) H_purplishGrey PVM (details)
                                                                                                            RRSWK_05735 (fasta) H_vividBlue PVM (details)
                                                                                                                  RRSWK_05736 (fasta) HMMptac_2_mix PVM (details)
                                                                                                                         RRSWK_05737 (fasta) HMMreg08220_2_PVM PVM (details)
                                                                                                                          RRSWK_05738 (fasta)
                                                                                                                                  RRSWK_05739 (fasta)
                                                                                                                                        RRSWK_05740 (fasta)
                                                                                                                                            RRSWK_05741 (fasta)
                                                                                                                                                      RRSWK_05742 (fasta)
                                                                                                                                                           RRSWK_05743 (fasta)
                                                                                                                                                              RRSWK_05744 (fasta)
                                                                                                                                                                RRSWK_05745 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_purplishGrey
       H_vividBlue

BMC-P(map on tree)

       P_dirtyPink
       P_adobe
       P_slate

(complete list of loci)

Protein sequences:

>RRSWK_05718
MHIREVRASCGCTTPILSSNYIPAGGEGYLLARFNTPTFRGKKGATLTVVIDQPFYSEVQLKVDGYIRSDMVFHPGSVEFGTINQGEAKTGGTKIYYAGRSDWQVVDIRANQSWLIPQFKQIERGPGKATYELTIAVREDAPAGTFQDEVIVQTNDRSMPRVPLRVSGNVVTSLNISPKSIAFGTVKPDQELVQRLVITGREPFAIASIKCPGWNVEFDNNGAEKKIHVLSIKMTPDSARGAQRSALTIETAGEKSITAKAILTADVISEQVVVAR

>RRSWK_05719
MHVSTGCVTNRELEFRLRRYGNRAKAVAFHREHCVGPIRMSNCCR

>RRSWK_05720
MNPVTFSILAIVGVAVGGLLLGGVRVRKIGLGSAGVMFVGILAGHWGATLDHEVAEFAKEFGLVLFVFTIGLQLGPGIVQLWKDQGLVLNGLAVAVVVMGVLLVLMFHSIIDLPALAAGGLFSGATTNTPSLGAAQQAAATVAEEGTDFGMLASAYAVAYPGGILGIIATMLIMKSIFKIDVEAEAKSAASLTGEQFEPIIRRCIEVDNEHLSERRFGEIPGIEETGVRISRIKRGDSLTVDPATDQTVLHPGDIIQVVGTEAGLNRFEPLIGRPSDFDLMEYTSNACHRRIVVTDPGVINKTLRDLSLDLIYNATITRIIRSGVEMPGRGSSRLQYGDVLHVVSDEESLDRVAKLLGNSLKAINETQFAPVFLGIFVGVVVGMIPISIPGVPFPVKLGLAGGPLIAAIVFSLLGKVGKFVWHIPFSANLALRELGIIMFLASAGLSAGKTFFSVALTSQGLLWMLAGLVVTMVPLLIVGLVGRLVFKVNYLTLCGVIAGSMTDPPALAFANTLSDSSACATGYAAVYPLTMVMRIVAAQTIIYMLFA

>RRSWK_05721
MVRFCAVISRHAEARQWALQRLTQRWGATAEISLPSSFTAGGFYDDEMGTGLTKELVAIEQFADPAGLADWKTTTNDWEREYAEAAEHEETRPLNLDPGYVTQAKLVLATIKDRDHRLYLKDGIFAEVTLNFMGGRWVHHRWTYPDYRTDSVAEFAMRCRDRLRSHLLETGGFRRV

>RRSWK_05722
MLLIADEFVHARGVSDVSRHQSKAKTIGSTFFAATVARRWTNFC

>RRSWK_05723
MPDGGPISVEPGPAIVFAALLTARMRERNGPATDLPVRYEGTGKGSLQRVSRRFGRVV

>RRSWK_05724
MNRSRFEDAICVDRNLACGWNVCFRNVARDGLLSLGQPRKKPCFLYPFLAEVAFLATADSRNELLTRSDPKKNWVRARLFAAPATQQKSIRVLLVIVLGLCTGVGVSRGEAPPKTAERPTRIAATPVDDVLSVRGQTVYRWQREQPSSSSSSYALPMSLDCTLLTGNCVLEHQGKRFEAESIFFVVDGIGSSIDVHLLMDKVQIGSNKKTREPIVAHLRLTAPPEIRAQQYRGSTDVPSVWWTKCGLSAPTNEPAIETAPLALPTESDSSGIVPVQYIQPVPNSTPNAAPNSQGMPPTGLVWDESGVVTDPNQLNGYPGQANGSAGASSGFAGPQNLASPYSASQNPASPYPESPYAAPAYPEPGSFDPVMPLPEPPILTGDGGTTGGWSYSIGGGSKTVEILSRGASRPAEFETITRVADNETIVIARGGITVLVRDLTAQTPTGLRVPLGTVSLSANRIVAWTPPLGDIITGAASAAASEGELYLEGDIVVRQGEQIIYADAMYYNAAREIGVVLDAEAIATIPQYQGTVRVKAEVMRQVARGNYIANNAAVTSSRMGVPRYWLQSNELSLTQKPTARVDEATGQVVPDSEPYVSSGGNFVYLGGIPVLYWPRFSTPLRKPTFYLTGADIKNDDIFGSQVLLEWDLFQLLGMNAPDGVESILLTDYLSDRGPAIGGRTTYTRSSMFGIAGPVTGTYDSYTIKDDGLDVLGRGRRELTPEEDLRGRTTLKHRHYLPGGWEFVAELGYLSDRNFLEQYFEQEWDQDPDRTTGMRLRKYAGSQLFDANFNIQINDFYQETERVPSFNHYALGGSLLGDRLTWSMHNEAGYEKLNPAETPLDPVIAANTSVLPGEFDREGVVTRTRQELSMPIQAGVAKIAPFAIGEAAYYGEGVDGDSVTRLWGGGGIRANLPFSRVDSTIQSSLLNVRGLAHKVDLSAEYFYADSDTDYQDLPLYDPLDDNAQEEFRRVFINDTFGGTLADQYDPRNYALRQGIQRNVTSPSDTVADDLQQLRLGMKHRFQTKRGLPGRERIVDLFRLDIETILFPKQDRDNFGETLGPTIYDAQYNLGDRVTLLSDGYIDWFDEGLRSFSGGVRTSRPGVGDFYVGLLSLEGPISSTVLRTKLDHRLNEKWIVSAGNTYDFGETGNVGQSFGLTRIGESFLVQIGANVDAGRDNTSFGFMVEPRFLPSSRLGRLGGQLIPPPGVEGIE

>RRSWK_05725
MLRAWSNKFRVAFSGLFWAVRDQNSFYVHLGVTAVVLVLAGALRLPQWQWVALFFAIGGVLTAELLNTAVELLVCVVHPEQDPRIGRALDVAAAAVLMASITAIGTGLLIFVPAIYEQLWAN

>RRSWK_05726
MKVSIIGGGGLVGSCAAYALQCGGLANEIALLDVNEELAVGHALDLRHGSPSVANQKFAGGGYEHIPSSDVICITAGLRRKPDESRLDLINRNTDLFMQILRDVKAAGPKPSAIVLVVSNPVDILTYVAAQTLDLPVGQVIGLGTQLDTIRFCSLIAEQLDAPPAQTKALILGEHGESMVPIWSSATIAGLPLEKYPGWNPSLASELFTRTRGSGAEVISRKGGAGFAVGIAIRDCIDAIILDNDVVLPISSVQNGCYGVRDVALSVPTVLGRTGVQATMEIDLWPKEVQGIRASGTALRKTLDTVLQRIR

>RRSWK_05727
MENLHKIKQDICDIGKRIYNRQFAAANDGNITVRVSENEVLCTPTLHCKGFLKPDDISLVDMTGKQLSGRKKRSSEALLHLEIYKQRDDIRSVVHCHPPHATAFAIAREPIPQCVLPEVEVFLGDVPITKYETPGGQAFADTIIPYVNKTNVMILANHGTVSYGESVEQAYWWTEILDSYCRMLLLAKQLGNVSFLDEEKSRELLDLKEKWGYADPRNTPDFKDCDICANDIFRESWADTGVDRRAFPAPPPIKTSPAATNGAASAPAGVDEAALVKAITDEVMRQMAKK

>RRSWK_05728
MKIARVLGSATLSRMHPAMHASSLRCVEVVERIDDLQKKVPGNDLIIAWDLCGCGEGDLVALAEGPEAAAPFKPDVKPIDASIVAILDHLEVDPSN

>RRSWK_05729
MSRIVAPSNVASSTGAAIDIESIVRRVLSELKVMGNQDAAAKPTGTLVIAKRVIALTDVEAIATTVKQIELPSRAVVTPAARDELRHRGITITKTNTDQTATATPTTTPAVEPGTRAIDLQTDGDVSATMLSSVKKQLTLRGIRLCNRASVTVILSSRPATTAHHSCGGDRCVVSINRLDDVRRFLAELSPNVFVLDVMHLHLVAITGAITTIAKPSIATQSRPQVTVAGGLS

>RRSWK_05730
MQTARVLGHARATVKHDSLVGRRLVIAQPLLLSGDADGPPLLVLDKLGCRSGDLVVLTSDGTAVRDITGSDVCPARWSVCGLVD

>RRSWK_05731
MQLDESIIRNVVAAVLSEVGPMPTGSNAPLNSHVPAGAGRNGVFTDVNEAVAAAKAAHQQLRSRSMEERKQVIDIIRRISIDQCEELGLMEMRETGIGRPEHKIEKLRTLGMLAPGTEFLQTKAFSGDHGLAVIERSPFGVIAAITPVTHSLPTITGNAVSMIAGGNSVVVNPHPSGKKVAAEGVRRFNEAIAAEVGIDNLICVIAEPTLETADTLFAHRDIALICVTGGPAVGRAALRSGKRAIVAGPGNPPVVVDETADFDNAARCIIQGAGYDNNLLCIAEKEVFVVDSVFDEMMAAMRRAGAVQLDASQIAKLTSQAITKVGDDQHDAAAKDFIGKDAAVLARAAGVNAPESCEVVFGETDEHHPFVTVEQMMPFLPFVRARNVEHAIAMAKEYEHGFRHTAIIHSRNVRNMTVMGRELDTTLYVKNGPSMAALGLGGEGYLSFSIAGPTGEGVTSPETFTRERRCSMVDELRVV

>RRSWK_05732
MFLARVTGSIVSTQKVESMKGHKLLIVEPYRLDTDSRERLLTTGRTFIAVDTLGAGEGDLVLVCQGSSARLTPETKTLPIDAVITGIIDSVHVEKKSVYCRKDGD

>RRSWK_05733
MLILVANLGSTSFKYKLLDVSGDLQSPDVRPDDRVLARGAVERIGDASTSRCEVTIGDYHNESEMAVPDHGVAVQACLDQLTDPQNGCLKDASEVSAIGFKAVHGGRKSGTFLVDDDVLDAMAEMNAAAPAHNPPYIAAMKLLRERFPNLPLVAAFETEFHDTIPKARRAYAIPSKWRDEYQVQKWGFHGSSHRFIAERAAELLGRDDARIISCHLGGSSSLTAIQNGQSVMTTMGMTPQTGLPQNNRVGDFDPFALPLLIERTGQSLEELLKQLASEGGLKGLSEKSGDLRDIEAAADEGDEKSKLALSVFVEEIRRHMGGMIVAMGGLDAIVFTGGIGENSDVIRQAVCAGLDGLGIQLDTTKNQNHRTESKNAGGEGSLHDGSSNVQIWVIPTNEEWIVAKRAKKAIGC

>RRSWK_05734
MNDAIGLIETKGLLPLVEATDAMAKAANVEIVKRIDLGGGLVTTVVSGDVGSVRAAVEAGAAAAAQIGELVSSHIIPRPADGLVAAYFS

>RRSWK_05735
MAKISEALGMIETKGFVALVEASDAMMKAANVQFLGWDKVGAGLAAVFVTGDVAAVKAATDAGAAAAGRIGEVVSVQVIPRPHADLEKIMKLPAATAAKK

>RRSWK_05736
MSMTVDRAQIEALVRSAIQQTRSNTTAAPAQSGAPVHSGATNGTPLGWVDGKPNLRVSISARHCHLTDEHVEILFGRGSVLEPDKDLYQDGFYAAKQTVMVVGPRRRMLPNVRVLGPTRPFSQLELAFTDSISLGIDAPVRHSGKIEGTPGCVLVGPAGSVQLDQGVIRAARHVHMNDHDAAYYGVSNGDMMQLHIKSNDCGVIFDDVLVREDKAAKLEVHIDTDEGNACNLDAATEVTLQPMPKPCACGH

>RRSWK_05737
MEEYFHALKENYHGSGKKTLSTESRREKLRDHVRAQGFAALGELTSILGVSESTVRRDLEALEDAGQTRRTHGGVYWTGETDTISTFRSHRDDGWARKQSIGRMAATLIEDGDTILLDGGSTVYELARLIVNRPLQVVTNSLPVAHLLSTSDSIDLIMIGGCVRRRTSVTIGPMADAMLADINVAKTFLSVAGVTERGFFNSDMMLVESEKAMLAAADQTIVLADSTKFGKVSLSQICRLEDVGQVLTDSELDKRWKSIFESAGTELLLAASASSSAPTPTASQGAPVASDSSIHSNSLSPSSHHADSANSL

>RRSWK_05738
MTDSPQRRTVFPGRLATAFSSPMKKLAAPARAVGLLASGAAAFGAS

>RRSWK_05739
MTNASEIDDCDDLVPGDGCANSQQGDVTASATQTHARHAGSFTGDFVNVFRGFCMGAADTVPGVSGGTVALILGHYDRLIAAISNIDSEAVGMLRARRWGSLIEKLDLRFTIALGVGIVAGIGSLAGLMHHLLLHQMNETMAVFFGLVLASVWVVRRNVARWTLGPILGTVAGIAIALAVSKIPASHGDINLVYLFLSASIAICAMILPGISGAFVLLLLGVYEPVIGMIKQFFKLNIDLAIVSHLTVFAIGCGFGLLAFSRLLNYLLRHHHDFTMATLIGLMIGSIGRLWPLQAVTADTADLELKFQEHVFISASQYDGSVVILAVLAVVAAVVVLVADRVTRHANIEG

>RRSWK_05740
MPELIRVLILAVVQGIAEFLPISSSGHLVILDNLLGDLGESATLVIILHAGTLGSILVVYWRRILNLLTSDRRVIGLLVVGTLPAVVVGLTIKRGFPWLTESPVLAAAMLIVTGVLLVVLGKIKPTVGQYTQMGWLGAFIVGCFQAVAILPGISRSGSTILGGRLMGLSNEDSVTFSFLLAIPAILGATTLAVKDLLDGTEAASDLPVATLLIGATCAFVVGIFALKWLIRWSREARLHWFAYWCIPFGISMLIFYVSR

>RRSWK_05741
MAKPQLTDRQKKVYELIRSLIQERGYGPTVREIGEHFGIKSPNGVMCHLRALERKGLISRKANKSRAIELTGENARSTTGLPLMGVVSNHPVALDTNPTDAIDLGKTLATGERFVVQVSGNSFSEHGVLDGDFLIIEQDRECADNSLVVVKMSDGRVVLRTWDASLNASKTADEIAAPGVVEVLGVAVSMVRESMAAV

>RRSWK_05742
MSDRSPFDDFAASLDQMSSLGRRRRLVVQSVSGPYLVTAQSVRLLNFGGNDYLGVVADGLAHRSSGPTALSVPDSAEEESQGDEGLVACGATASALVCGWTPHHEQLAAAIARAEGTEAAVVFPSGYAACSGAIATLCRQGDLILSDQLNHASLIDGCRASKADREIYPHRDVECVDRILSERRGEFRRVWIVTDGVFSMDGDTAPLHDLVRVARKHDAQILVDEAHGTGVLGPRGGGLCEAMGVQQEIAVRIGTLSKAVGHQGGFVAGPRVVIDYLIQFCRTLIFSTALSPRTAVGAHRVITSMADWTDRREHVANLAVHLRRQIADCLPDEFTAIEPVSELDEGIPIVPIIVGDDARAVEISERLRERGFFVPAIRPPTVPEGTARLRVSLSAAHRLEHVDDLIDAIKSIS

>RRSWK_05743
MRSQTISNRNILLLFFITGLTSIGCGPERLKPDDLPRREREEVIVSSPAPAADAPATAASPNTSTTPNSDPDSTRDDAFREAAMQGDLQTVKQLATDGTEIDAAGPGGRTALQLAAFDGHLDTVEWLIDQHADVDHRDEFGRTALMYAATGANASTVKALLSAGADLQLVDGDEHFNALMFAAAEGQAEVVELLLEKGADRSAKDIDGETAMDFAKANGHDAVVKLLD

>RRSWK_05744
MLQHSLEIRVAYQETDGQRRVHHANYLNYFERGRVEMLRSFGHDYKGIEDRGMMFVVTEMNVRYFAPADFDDVLTITTEVVELRKVRMRHRYTIRRGDTVLVEADSVIACVDRNGKPARLPDLTPVHQPDKELAS

>RRSWK_05745
MALAEDKVREALKEVIDPELYVNIVDLGLVYVVEVGDEKEDGRHDVNVEMTLTSPMCPAGPQLVAGTKAAAESLEEVDACEVKVVMEPAWSPERMTDEARDHLGIY

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021