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BMC type: PVM


Organism: Verrucomicrobia bacterium. Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

    LBMAG57_19190 (fasta)
          LBMAG57_19200 (fasta)
                   LBMAG57_19210 (fasta) HMM00202amintr_1_rmm RMM1 (details)
                     LBMAG57_19220 (fasta)
                            LBMAG57_19230 (fasta)
                                        LBMAG57_19240 (fasta)
                                                  LBMAG57_19250 (fasta)
                                                    LBMAG57_19260 (fasta)
                                                          LBMAG57_19270 (fasta)
                                                                  LBMAG57_19280 (fasta)
                                                                         LBMAG57_19290 (fasta)
                                                                               LBMAG57_19300 (fasta) HMMreg00455_2_PVM PVM (details)
                                                                                   LBMAG57_19310 (fasta) HMMptac_2_mix PVM (details)
                                                                                    LBMAG57_19320 (fasta) H_purplishGrey PVM (details)
                                                                                      LBMAG57_19330 (fasta) H_vividBlue PVM (details)
                                                                                              LBMAG57_19340 (fasta) HMMacetkin_1 PVM (details)
                                                                                               LBMAG57_19350 (fasta) H_blurple PVM (details)
                                                                                                 LBMAG57_19360 (fasta) P_dirtyPink PVM (details)
                                                                                                           LBMAG57_19370 (fasta) HMMalddh_1_eutpdugrm PVM (details)
                                                                                                            LBMAG57_19380 (fasta) P_slate PVM (details)
                                                                                                              LBMAG57_19390 (fasta) P_adobe PVM (details)
                                                                                                                     LBMAG57_19400 (fasta) HMMaldol_4_pvm2 PVM (details)
                                                                                                                      LBMAG57_19410 (fasta)
                                                                                                                              LBMAG57_19420 (fasta)
                                                                                                                               LBMAG57_19430 (fasta)
                                                                                                                                 LBMAG57_19440 (fasta)
                                                                                                                                    LBMAG57_19450 (fasta)
                                                                                                                                         LBMAG57_19460 (fasta)
                                                                                                                                            LBMAG57_19470 (fasta)
                                                                                                                                               LBMAG57_19480 (fasta)
                                                                                                                                                   LBMAG57_19490 (fasta)
                                                                                                                                                     LBMAG57_19500 (fasta)
                                                                                                                                                         LBMAG57_19510 (fasta)
                                                                                                                                                          LBMAG57_19520 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_purplishGrey
       H_vividBlue
       H_blurple

BMC-P(map on tree)

       P_dirtyPink
       P_adobe
       P_slate

(complete list of loci)

Protein sequences:

>LBMAG57_19190
MKLRRRAEPLVMGFQIAPMVDVLLVLLCFFILTWNFARKEMELSVKVPTAEHGGEPKLEVNQSVLNLKEDGTMVMNTKPINFDELAVKMKALADLKPDYAIILRGDENVPYKYVARVLGVCNGAGIWNVALPVNAPKP

>LBMAG57_19200
MFAAARVSLVASGGEVATLRTQFSMKSLVSVLAVIWLGLSQLVAQTPASPRPPASAPAAAGAVERLPAGEAAKPPKPGTAYVPAAQPVKDETTVLKMIQDGGWTMVPLGVMSVLAVMLVLVFLATLRRSAILTTHYMNTADVLLKKRDYLGLLAISSRHSEAVARVVQRTLDFATKNPGANFEVVKSIAESEASAQAASFQHRVTYLADIGTLSPMVGLFGTVWGIIESFGELARASGANRDWGLAGGVSKALIATGGGLIIGIVSFAFYALFRNKVQRLISDLEVAGAHVVGLIALNYKRREASRASLDEEI

>LBMAG57_19210
MHDSQTSTRELYDRHVIPTYGRFDLRLARGRGCEVWDEEGKRYLDFGAGIAVTSIGHAHPRVVRVLQEQVATLVHTSNLYYTRPQALLAERLTRLVGAGGKVFFCNSGAEANEALYKLARKYGNDGAPPPPKHSVGEVVQSDTHRFGIVTMLGSFHGRTLAGISATGQEKVKKGFEPMVEGFRHVPFNDIAALQSAVDVPGTVAVLIEPVQGESGVHPASAEFLRAARELCDERDLLLMFDEVQCGLGRTGEWCGWTSIAPDVMPDAVSWAKGIAGGFPLGAIWVNERAVKLKDGTVKKLCDLLGPGTHGTTFGGTPLVCAGANEVLAVIEEEGMLANATALGAHALTVLRAISSPLIAEVRGLGLMIGIELAADFAQRAKLSEGKSPALFLVEKLHDAGLLTIPSGTHAIRWLPALNVKREEIEEAAAILARVLGAV

>LBMAG57_19220
MKLSLLSAILLGATCLVHAADPAPPEGMVLIKGGKFSMGSKDGSSDEQPVHEVTLRPFFMDKTSVTNAQFEVFVEATKYVTTAERVTRGGSWMCADNYCRGYRPATRMKVAPDTEFQNTGFRCVKDLP

>LBMAG57_19230
MSEASDTARAVRRAGIIFGVIVVAAITMVLAWLVPEAKRIMRDRETQSRDQRAGSDMVRVAGGSFEMGANDGARDEQPKHNVSVNPFWLDRAEVTNAEFARFVKATGYLTTAEIKRQGQAQAGSWCFKRGPDAKAANRRTWIAFVEGASWRRPRGEGSDIGGKERFPVVHVSHDDALAYCKWARKRLPTEAEWECAARGGVLLTRYPWGGEIAEGGKWHANSWQGDFPLKDDALDGFAGLAQVAHFPVNGSGLHDLAGNAAEWCADWYQHDYYAQLRPDPNFAAHKNPRGPETGSDPTEPGVSKRVVRGGSFLSAAEECRVSVRGKEAPEFSAEWIGFRCVKDAQ

>LBMAG57_19240
MSINAGVNPIWKKWTGRLVLLLLLVLTFAARCHNRPQIFHDGGVFFVDGDCYSRMTRAKMVHEGHWIIRHHDFENWPQGVTPHTTALLDWMIVGLKPAVDLAFKITDPQWKNTFHAQTLDVAGALISPLLGVLTAAWLWWWAGAMQLRFRSAMVLLFALSPIAVHGAVLGRPDHQSLLMFLLAVALGCELWLIRPEDDAKKSHRAWGIAAGSAWGLALWVSLYEPLVLLVPVITARLLRERKTLLGVGSRGEWIALFGFFLLGLLVDGWRIDVPGAELRENFGRWSSTILELRPLKPTEPLLWQWLGLLVLATPVLLCLAGREDRCAFVLLGGFVILFALTAWQRRWGYFLLVTFAVSLPWQLRAFRDVRIAWLAFAVGLWPMLSSWWPEVKERLRGGANEAIFDQAKEDQAWHQLGQTRLRTIALKMKGGERSGFISPWWYSPQIAYWSGQPGVAGTSHQSLPGIVDTARFFLSADAEKAAEILQRRRVGWVIVDPSADVEQRDRLHGVTNSEKVLGVAAPKEPLCEILNYHPRKAPPFLREMKPQELGLVTQLAPKDESDPQSQGIQIVFTQMQRLFYVEREKP

>LBMAG57_19250
MSADFDFLIIGGGSAGYAAARTATALGLKTGVVDGAEDLGGLCILRGCMPSKTLLESASRFSTLRRAEEFGLRASGLEVRGPEILERKRRLIGEFAAYRQEQLQGGKFELVRGWARFLDANTIEVTLRDGGTRRITAKTFLLATGSVVSEAPLVALKEIGCWSTDDALDSAEVPASVIILGGGATAVEFATYYSGLGREVTLIQRGGQLLKGTDPDLAAALAHGLRNRGVRVFTGTRLVGAENADGKKRIIFEHDGKTVIAEASRVLQALGRSPNTRGLALDAADIRVENGRPSTGATQQTGQPHIFAAGDVSGPYEIVHIAIQQGELAARNAARLISGGTEAMEQSDYRLKLSVVFSDPEIAVVGRGEAELREAGVAFRAASYPFNDHGKSLCMGETDGFVKLIAAADGGEILGGACVGPHAAELIHEIVVAMRFRATARQLAETPHYHPTLSEIWMYPAEELAG

>LBMAG57_19260
MADITTNQKNLLSSDVEIKGSIKFLNELTVDGKIEGEINSAGILTVGENSEIKGEIKTKSVTVYGKVHGNITVEDRCELKGRASLYGDLKATRLVIEDGATFVGKSEVTPNKVAMKQPEIVRGGAARSGS

>LBMAG57_19270
MSAYAVRATLAEHPAVAKNERKNSDKMSAVCPHCGFTQEESVIAKSTVCRKCQEYYSLERALAGEKSIVKAPSLFSKLTRMVLGEKKREVCCFSCAHKQVLSTSAQSTMCPGCGAYMDLRDFKITSPFGRSVQTAGEVHVAAKGDVTSTRLMCGSALIEGSLRGCIVCTGTARLKFKSRLTGMLDAPHMLVEKGGDVEFARLVRTKTFEVNGKARARVVADKVIVGKTGWLEGTVYARAITVEKGGVFTGDLNISQDEFDVAEEPMDPDRNIARFDDDSVAFGPM

>LBMAG57_19280
MRIFSPTETESSERRVAIVPASVTKLTALGAQVAVEAGIGASVNFSDPEYRDAGAQIVADRRPTLASADIVLRLRKPPLADIAALKRACIHVSFLDPFTDVETVRALAAAGVSAICMEMIPRSTIAQKMDALSSQASLAGYVAVLLGANRLDRIFPMMMTPAGTIPPAKVFIIGVGVAGLQAIATAKRLGAVVEAFDTRPGVEEQVKSLGGKFVKVDLGEIGQTAQGYAKELTPEQLAKQREVMEQRCAQADLVITTAQVFGRKAPVIITKAMLEKMKPGTIVVDMAVESGGNVECSIPDEDIVVNGVKIIGWRNLAGRVPRAASAMYSSNLTNLVDHFWDRTAKTFRLDPANEILRDCLVTHDGAIVNERIRTLAL

>LBMAG57_19290
MRRAFTKSFLLVLAILVIVEIAMRAFWSRGLSGRFDYGYHPTAGFVEKSGGALDLVRAGGRRFHPQRFAQQKPAGTFRIMVVGDSVPRGPSLAEAYPTRVAEFVSARGIPAEGWNLCLPGYGAHRCHVVLTHALKYQPDFVIRHVNNSNEYEDEREWRRSQDFQGWHPKNLLMKSLLVRRLHEMKTEGVFWSLLPEKIRAQQGVNDAGAKIIAMTDETQIRAWQERVRRFLKEDLDLCRKAGVPVLLITQVRMRGTGKSATLDDSGLDDLARSFAGPGVDVLTMKEVLSATDFAPLFMDTAHLNGRGHEILARAIAEKITPIAKPPAR

>LBMAG57_19300
MKVPFHVVQARRDRLADLLGQHRYLPVKELCRRLGVSEATARRDLAALVGEKKIKRTHGGALSEFNDRFPSFRDRQGRGGRAKAKIARATLAYMEPGGTYFMDSGTTICAMAEAFRDHPITPVTIVTSNLPVGEMLAAIPDVQVFMVAGQLLHLQSTLLGEMAQRSLEFWKFDTAFLSAEAMNPAGIWNSQAAIVDQQRVVLERSARTVFCIDGSKLNREAPHFLVPWDRVDALVTDVSDERLATAGISLRKGQRAASGSRHAVPQALQEQEEAKASEADTEEMPIHIL

>LBMAG57_19310
MSAITAPNRPVIEALVRSTLAKQLGQQVPAGVAPTLVVNSSARHMHISPENLETLFGKGAKLTVHKMLYQEGQFASEQTVTLIGPRRRVIPSMRILGPCRNLTQIELALTDAVQLGMDIPVRMSGDIEGTPGGYVMGPKGMLEMKNGIIRAARHVHMSPSDAKFYGVKHLDRITMKVTSPMCNTRFDEMIVRVDPSFKLEVHMDTDEANACDLERATKVELIKS

>LBMAG57_19320
MSEAIGLIETRGYVGLVEASDAMVKAANVQLVKSIPIGGALITTIVRGDVGSVKAAVEAGKEAAKRVGNLVASHVIARPTPELLKFFTS

>LBMAG57_19330
MIETKGLVAQFEATDAMTKAANVELIGWEKVGSGYVTVFVKGDVAAVKAAVEAGATAATAIGEVVAVHVIPRPHDDLHFLGKFLGGKFAAAVK

>LBMAG57_19340
MTPNKILVANIGSTSFKFRLIEMPSERVLAKGGVERIGSAASPWKAQIGSEPEQSGTTALPDHGAAIALVEKLLGGFGELAAVGFKPVMARGISGTQVLAEPVLRAMEEINTLLPAHNPPYVAAVRSFHKSHPKLPCIGTFETAFYDDVPAENVRYPVPREWETKYGIRRYGFHGASHRFVSQRCAELRGTDKLRIISCHLGGSSSIAAVRDGKAIDSSWGMTPQSGLPQNNRVGDFDCFALIYLARDLGLGIDAVEKALTLQSGLKGLSGLATGDVRDLLDAAAKGNADAQTALDVFVAAIRKYIGQFLVEMNGADVLIFTAGIAENNPILREKICANLDFCGLELDREANGRVRAEEAVISTPRSKIEVRVIPTNEEIIIARNAWAKLSTAN

>LBMAG57_19350
MIETRGLVALVEATDAMLKSANVELVGPITQVGNAMVTVCVTGDVAAVKAATEAGKIAAQGLGEIVSISVIARPHGDLAAVLPKAK

>LBMAG57_19360
MILARVEGSVVATKKNAKMTGNKFLLVRPLVIDSPTAKEWKPGTSTLVVTDSLGAGEGEIVLIVQGSSARLAADDKDSPVDAVVIGIVDTVDVGKHILFKAQ

>LBMAG57_19370
MAMIDEKLVSKVVSEVLARLASQTKSAPSAATSYGVYEKMEDACAAANRSFEKLRELGVSARRKAINVIRKMCVAKAKEWGEIEMAETKIGRLDHKIEKLKICGDLVPGVEFLERMAFSGDFGLTVIDYAPWGVIGAVTPSTHSVPTLTGNAINMIAAGNAVVYNTHPAACKVAAIAIKAYNEAIFQETGISDLLTTVVKPTLETFDVLCKHPAVKLLCVTGGPAVVAAAMKTGKRAVCAGPGNPPVVVDETADLDNAAKCIIQGASYDNNLLCIGEKEVFVVEAVADKLIAALKRAGAVQLDAKQVEALADKAFIFPQGKGAGCPHPVVNRDLVGRDAAVLAQAIGLSVPANTQLLFGETKADHIFVDEEQMMPFIPVVRVANVDVAIEEAIKAEHGYKHTAIMHSQNIRNLTKMAQVVDTTLFIKNGPCMTGLGLGGEGFLSFSVATPTGEGVTTPMTFTRSRRCVMVENLNLF

>LBMAG57_19380
MRLATIKGHVTSTVKHKSLEGWRLLIAIPESPDLAPQIVLDSLGAGIGQKVMISSDGSEARKMVGDKLSPARWSVMGIIDPERSLAL

>LBMAG57_19390
MRMGTVIGRVTLSVRSPKYVGERLLLTLPWKTDTFGGVEKHDPAIVVYDQFGAGVGQQIAISEGREAACPFEKPTPVDAYCAALVDEIFYKE

>LBMAG57_19400
MKLIAQKEAADFVKTGAKEFRQNSEIRLTPGAKDVFTEAGVKVVFDAGAAAIATGSAGSAPVAAPAPYSAADIALFASKEATTIKEQICDIGRRIWAREYCDGNGGNISARLGPDRFICTPTGVSKGFMTPDMMCMVDGKGKQLGGTWKRSSEITTHMAIFHSTPEAVSVCHAHPVHAGAFAIKGMQPPPRLIPELEVFVGTVAYTPYKTPGSPEIAAEIFPLAPKHQSILMGNHGVICWGKSVEDAYFKMEITDAYCRTVILAQSIPGSASIPCDKLPELLNIKKSLGLPDDRYDLKPAGLCEVDPWVQMCGSHGCSSPVTPWNPMTNDAPSSNAEIEALVQKLTDEIVANLKK

>LBMAG57_19410
MALGGKAFFTLTGNVSSAPRIEIAWRRGWMEISNGEMHSAAVDSMRLGISPGWQPNQSVSGTNVVCRRARARLFAMGSE

>LBMAG57_19420
MKRVLIFTAGYGEGHNAAARGLAAALTEAGAEAEVRDLFRETYGRRQKMAERLYIECINRAAPLWAAAYRLVDRTPLMRWMMPAMGAVRRKLAEVLAERQPCAVASVYPAYGWLLDRIFPGKNPPFASHTIVTDSITVNSVWWKFRSDSWIVPNEATAAVMRGAVSAERVHALGFPVQMKFTDSTAVRTPPGNGEPLRIFYMVNHGYSVAARLVRRLLEIPGIALTVAYGKEKAVGRAIAEAAQSAGRKIELHGWTPLVPELLLRNHILIGKAGGAATQEAIAAKTPMIITKALPGQEEGNARLIVENGCGALCESDDAIVDAVANAAEDHAELWHRWHAAIVKLSKPDASREIARFILAQPASAVVSCVDGGCVRSPGG

>LBMAG57_19430
MTRELIIITALSLLLMAAAFVAVACLYGFLLAICVYVTAGSLTACVVAIIKLSTMDPKE

>LBMAG57_19440
MKTVFTEKSDVEIAELLLNDEVNNNAIFNAALGREALSRLLLCKAREVNLLHHETLERTNHGTDWCLGREFLHKGKREWVGFSWTQDSSYTQLDKLMQARAALPELIQKFIEEHP

>LBMAG57_19450
MTGLKIAQRMIRLLPGVTAGVGTCDWYEPRIRHVHLSPRTARGEDMRALACAAHEAAHAVQHVRLHGISFRVWQSWPVQSPLVPLGLFSATLAAVAMKWHPWPVAIFAACVALGRVAAVMLMEWEASTIALGWLKLHGFEHPDSAHYLRRLWRSYLWIAIGL

>LBMAG57_19460
MSGRPRSRQREEDEFANVEPPPEAPGQSWIDDMVQKTREPEPMEAEPLMPGEVDEEVELHPVAEPKEPRSKSAALLRRLPPEIMKYLGALRACPAPAMARKAAGLTGGQLGYWRRVPGFSDLEREATSDAKDTLLASAYNRAVHGVVKPVFQLGNLVGYEREYSDKLMEVLLKGMREEFKPELPKETAGTTNIVITDPAAIADVVRRLSPTSQPKQAQAIEIEAPKPAPLPQPPPGSDF

>LBMAG57_19470
MSEPAPTPETDAKLAAATEDSSATASPPSDWPAFARAEQDELNRQLSVALKGKRPYSSKFADETIASQVKRITELEEKLNGWFSERNAARDEQDIAFSLGEHAMFCAHHTDAERVANTVGGNCPICNKAQIRQLRAERDALAKERDALLTELDEAAKGNA

>LBMAG57_19480
MPEPKPEPQIVKVPLIADHVQRAREWRAKGGKSHSKAHMSEMGKKGWEARKKKMHRGVPFNQIWRYRKCFQGTPKGLDKGTLPVVPPSPTNPEIKCPTERCNYSMIASDRVARVMHEYRAFRFECPRCGKKAIVRRGKKSTIGAFFACRVEAVKE

>LBMAG57_19490
MSKHADTFFRREPIYRAMADMPALTHWRDRTVPWTPEQSDVIAWVIERFPELSMEEARKICSSTKGKGVVEFTAGKLWRGTEDTRRLDQICERVDRQRRKKTRTPKQRAAKPAQRSTAPALPPVPHVRTNDRMAAALVVFHRWKAASKIPAWTFADLVRSFVIHSGGGKPDTMRRYIRALHAAGWLHKDADGMLSASPTAPPTP

>LBMAG57_19500
MKKKKQPAKKMINYRDLSPDEQAKMEKDMGFGVDHGPRPDPAPFAHKLKAERLRAGLTQTECARLLDVSLHTICKWEKGASALSLTQEAALGRLRAAKPATPSLQQQLSAMPRAKLERLAASLVKKKGARDEQAR

>LBMAG57_19510
MTNTTTTTNAPVATLTETHEVIQVKGGKFHRPKQTTHARMEWLKPMPTECGYTVTALNVFNDIAHALEYTGGHREHLCAKCFPPATQTAHTPGPWVIDGDTIQGAPELNGEQPHAVEATCVAVVLSRERGSYRHYPKERAAANARLIAAAPELLAALEKMLARWDALSVEDLGPGCRAIADNARAAIAKATGGAK

>LBMAG57_19520
MKPNLFCFATGGTDPHEIKLTVPEKDLAAFAALPHRSRKSILVTNITGTTYRVRRHSCSLGCYCAALAEPVANSN

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021