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BMC type: PVM


Organism: Verrucomicrobiales bacterium. Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

      DDW77_03760 (fasta)
                 DDW77_03765 (fasta)
                      DDW77_03770 (fasta)
                               DDW77_03775 (fasta) HMM00107alcdh_2_mic1mix MIC1 (details)
                                         DDW77_03780 (fasta)
                                          DDW77_03785 (fasta)
                                               DDW77_03790 (fasta)
                                                           DDW77_03795 (fasta)
                                                                 DDW77_03800 (fasta) HMMreg08220_2_PVM PVM (details)
                                                                      DDW77_03805 (fasta) HMMptac_2_mix PVM (details)
                                                                        DDW77_03810 (fasta) H_purplishGrey PVM (details)
                                                                          DDW77_03815 (fasta) H_vividBlue PVM (details)
                                                                                    DDW77_03820 (fasta) HMMacetkin_1 PVM (details)
                                                                                      DDW77_03825 (fasta) H_blurple PVM (details)
                                                                                        DDW77_03830 (fasta) P_dirtyPink PVM (details)
                                                                                                    DDW77_03835 (fasta) HMMalddh_1_eutpdugrm PVM (details)
                                                                                                      DDW77_03840 (fasta) P_slate PVM (details)
                                                                                                        DDW77_03845 (fasta) P_adobe PVM (details)
                                                                                                                DDW77_03850 (fasta) HMMaldol_4_pvm2 PVM (details)
                                                                                                                       DDW77_03855 (fasta) HMM02866_1_pvmeut PVM (details)
                                                                                                                                  DDW77_03860 (fasta) HMMnopfamclust22_1_pvm PVM (details)
                                                                                                                                   DDW77_03865 (fasta)
                                                                                                                                    DDW77_03870 (fasta)
                                                                                                                                           DDW77_03875 (fasta)
                                                                                                                                               DDW77_03885 (fasta)
                                                                                                                                                   DDW77_03890 (fasta)
                                                                                                                                                    DDW77_03895 (fasta)
                                                                                                                                                            DDW77_03900 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_purplishGrey
       H_vividBlue
       H_blurple

BMC-P(map on tree)

       P_dirtyPink
       P_adobe
       P_slate

(complete list of loci)

Protein sequences:

>DDW77_03760
MTGLLTVLGILLVLVILVALWVMGIYNRLVTLRNRFKNAFAQIDVQLKRRYDLIPNLVETAKGYLKHERETLEAVIQARNQAAQAASTAASDPGNPGAVQALAGAETALTGTLGRFFALSEAYPDLKANSNMMQLNEELTSTENKVSFARQAFNDAVTTFNTQREVFPNNIFAGMFGFKEADLFEVKDEAVKEAPKVSFD

>DDW77_03765
MDFFEHQEQAKGSSTRLVILFGLAVVALTAILYLSIAATLVYVTREEGEAALSLWNPELLFWVVLGNSLVIGCGSLLKILELRGDGGKIAQMLGGRLVHPETKDPAEQRLMNVVEEMAIASGVTMPEVYVLKDRSINAFAAGSNPSEAVIGVTTGCMHLLSRDELQAVMAHEFSHILNGDMRLNIRLMGLLNGILGLAIIGRILLEFTSREEKNPLPLLGVLLLILGGAGLFFGKWIKSAVSRQREYLADASAVQFTRNPEAMTGALKKIGGLASGGRIQHAHAEEASHLFFENGLTSRLGSIMSTHPPLADRIRRIDPQFDGNFPQITFEPTVSVVDQEPQLDLTQESHSPDFMQSAVMAGMMMGGSRMAWNPDQAVQTAGKPGQVQLQYAEALIQKLDLDLHAATHDPSGAQALVFAMLLSKETDLQTEQLETLEQQSSPELVREINLLHPKV

>DDW77_03770
ELVREIKLLHPKVTAMDPRAKLPAVDLAIPSLKQLSPSQFNTFSSNLRWLVESDQQIDLFEYALQKVLERHLKSHFEGTSSAADAYHSLIPLLPHCRLLISGFAHIGHTDPAAIDHAFQQGTAGLGEHGKKLQLLDNADCGLGDMDQAIDHLNQATLTLRKKVVDCLAHTVGADGEVTLQEAELLRAFADALGCPIPPFVNGPQRPGNT

>DDW77_03775
MTGSPSSTYAGKLVLFHGPGKALECRSAQWKAPQGAEILVKITHTAICRSDLHTHCGHRSVPTPTVLGHEIMGRVVAFGPSASRMDLRGEPLEPGDRITWSIYAHCGDCFHCHSGWPQKCTDLFKYGHEPVSSDGSDSSGGMASYIQLRPGTSVLKLDPKIPDHHAVTLNCAMATAEAVVRRAALSKEPAPLVVVMGGGYAGLSTAAMCKAQGARAVMVVETQTALHSRCLDFGADAVFQPEEDALKTWVMNQSAGRGADHVMEMAGSSAAAELGLELLATGGGLMLAGTVFPSPSIPVDPERMVRGCQTIAGMHNYAPQDLLAATRFLEEEGRNLPWDALHGGTMCLDQSQEAFDEAQRSPGKRWILTP

>DDW77_03780
MVAAFGAYFCMYGLRKPFTSTSYESLQAYGMDLKSAMILFQVIGYTLSKILGVKVISETRPDHRARRILLLTSIAWLALLGFAALPLPHGVWLLFLNGLMLGMVFGLVLGFLEGRRMTECMAAGLCASFILADGFTKSVGAWLVLHGVTSTWMPFCAGALFMIPLWIFVWMLGQIPPPDPADEKERQKRAPMAAADRKRYFLKHAPILLAICLAYVLITLVRSLRADFAPELWRALGMEATPEVFSLSEMWVALGIMLCSGLFSAYRDNRRALRHGLLAATAGLGILLISLMGLRWQWLGAFPFMVLTGLGLYLPYVLVHTTLFERLMAVTRDGGNLGFLMYLADSAGYLGYVGLMLAKKFLPVPDEPLVFFTLLCGWVGVLGMLCFVLAQGSLRRMLGSEPTTPQSS

>DDW77_03785
QGYESFKVSVEREQARAAEGETPLSELNRLKESLLSTEQGWISAIRNYQLSRDRFKMDLGLSMDTLMIL

>DDW77_03790
MILDETELKDLEIHHPELSVDQAVEVALKMRLDLDNTRDRLIDSERRIRIAADGLQADLDLRLSGQLSSRPGEGFQFPDFRQRSWTAALGVDLPINRKAERNSYRSALIAFDRARRQQELFLDQVKLDIQDGWRNLEQRKREFEISQVRVELSQNRRDEEILKRELGLGLALDLVDAQNDLINSQNQLTSALISHTIARLGFWRDMGILFIKEGGQWEEKDYELLQ

>DDW77_03795
MNYFNEFSKYPCWLALLLSVATGVLSASKAAEAATRPALDRPNVILVFLDDAGYGDFAHHGNPTIETPTISRLAWEGAQFTQFYTSSPACSASRYSLLTGRVPGRSGLGSWVIGPGAARHMHPKERTLAEGFKASGYATALFGKWHLGNPNEKNQRTPEALPLAHGFDQWLGTNVSHDYDNAKLLQSDVNGDQPVRGYVELGRDLPSHPGISASLTQRYTDAALSFIEQNASQPFFVYLAHNQPHLGLYASDAFVGRSRRGLLGDVMAEIDHSMERILKRLSKLELTNHTLIVFSSDNGPWLRFKETASHPKYGEARMHVGNAYPFRDGKGSTWEGGHRVPGIFYWPGVIKGQTRILEPASTLDVFPTLMHLAGQPLPDDRSVDGRDLLPWLAPAHFSGEVSPFRFLYSYHDNQASALREGPWKCHIRIGSQLGDDYGFTVSEAAPLLFQVEEDLGERFNRAAEYPERAEKLVENLRAYRQQILQEGTYWD

>DDW77_03800
MASFSKLFLFMQAEERQKRITDHLQKVEFSTLDELSELVDASISTVRRDLTLLEATGLVKRTHGGARLLQPQSQEFIFTERETRENDEKDLIGKACARLIPPNQSVIIDAGTTAFHAAKHLGGGAPQIITNSLPVANHYASNGNVEVILSGGVIYPRLGVMVGPIANETFSRMHADYAIMGSGGITEEGITNSHNLLIDIQKEMLRAAQKVIFCLDHTKFGRRSVSFLCDLGQVDSIITDTKAPPALLEHFSSKGIEIVLAH

>DDW77_03805
MMSSQSSLPHRAVVEHWVRQAVYQRMGQPVPQAAQAPNPLVVNVSARHCHLTQEAVEALFGPGHQLSVHKWLYQEGQFAAKETVTLVGPRSRVISNLRILGPCRTLNQVELAYTDAVALGFDIPLKSSGDIVGTPGAMLMGPNGFFEMDQGVIRALRHVHMHPDDARFYQVSQGDFMSMRVGGACGMTFEQMLVRVDPSFKLEVHIDTDEGNACNLLPNTSCELIR

>DDW77_03810
MSEALGMIETKGYVGAVEASDAMVKAANVRLVKTIPIGGGMITVLAQGDVGSVKAAVDAGSNAAARVGELISSHLLARPHEDLLKAFVPDGKAKKG

>DDW77_03815
MANQAIGMIETRGLCAMLEACDAALKAANVTMVGWEKIGSGYVTGFFRGDVAAVKAATDAGAAAASQVGEVISVQVIPRPHEDLSGLGSWLKQS

>DDW77_03820
MKILVANLGSTSLKWRLFAFTSEEVALLHRGGLERVKDYPSAIQECLEQLKEAGAIEEESELSAIGFKTVLAQSVTGCVALSEEVLKDMEAGNQIAPAHNPPYLTGIRLFAERMPYTPLVGLFETAFYQWIPETSKRYGVPQSWFEAGVRRWGFHGASHKFIAERSSELLGREDVAERARQLYVNQGQSLVKGPSLRVVSAHLGGSSSVTGIRDGVAIGNSMGLSPQSGLPHNNRVGDLDAMAIPYMIQKQGWTMEQVLHDLCSSGGLSGLSGGFNDLRDVQSRAEEGHADAQLALDFLVAEVRRWMGAYYLELGGLDALVFTAGIGENRPQLRKAICRELEPLGIQLDESLNEGCLGQEGFISDANSPVKVLVIPTNEELVVAREVKRFLENKS

>DDW77_03825
MSNQAIGMIETRGLIALVEGTDAMLKAANVTLAGPMKQVGNALVSAVVVGDVAAVKAATDAGAEAIKSVGGELVSVHVIARPHSDIGAVLPG

>DDW77_03830
MFLAKVEGAVVATKKDPSMSGRKLLLLRPQLVDDQDPTQFRGGKNTIVAVDSVGAGVGEMVLFCQGSSARLAPNLKQAPVDAVVIGIVDTVDVKGTKIFNAQSE

>DDW77_03835
MSSQMNETLIREVIQEVLGKLGGGSSQAPAAPSTPPVVASSPSYAPPSCGVSSSSKGRHGVFETAAQACEAAQQGFLQLQKKGIEARRQVERIVKTMCEDRANEWGKIELEESKIGRLDHKIGKLQIIGLVPGVDWIRPDGRSGDHGITLEEYTPFGVVGAITPSTHSIPTLAGNIVNIVAAGNAVVFNAHPAASRCAAMAVREFNKAIEHETGIQNLVCIIEEPTLESFKELCSHEAVRLLCVTGGPGVVKAAMQTGKRAICAGPGNPPVLVDDTACMKRAAESIIQGAAFDNNLLCIGEKEVFALENIADELMGAMEKAGAVRLNAAQLDQLTQAAFTFKEGQGAGCPHAVVNKDLIGKDVSVLAQAAGLRVPDGTELLFAETDASHPFVDEEQMMPFIPIVRVPSIEAGIEESLKAEHQYKHTSIIHSHDVNHMTAMARALDTTLFIKNGPCMAGLGLGGEGYLSFSIATPTGEGVTNPRTFTRVRRCVMVDNLRIY

>DDW77_03840
MLLARVEGSMIATRKHPSLQGWRMLICQPLDARGLAEGTPVIAIDPLGAGMHQKVIISSDGSAARLAVMDDKSPVRQIIIAIIDEPEKEAAA

>DDW77_03845
MRLGTVIGRVTLSQSVPQLKGARWLLISPFNRKHFQQGHQPLNQITDEPSLVIYDNLGGGVGDTVGFVEGREAASPFDPPIPIDAINAALVDETFYTPKEDA

>DDW77_03850
MKKIISAKDVESLLKQGASIESITADAILTPSARDLIRNQQEPHSSSLTPAAGAAVEAAVTAGISAQSSQRELDTFFRTPQMEALKVEICDVGQRLWQRAYVDGNGGNIAIRVADDLALCTPTLVSKGFMKPADLCLVDLDGQQKAGEKKRTSEILMHLEIMKRQPRAKATVHCHPPHATAYAVAGVEPPTCMIPEIEVFIGKVPIAPYRTPGTPEMGQLVADLVDKHNTVLMGNHGAVAWSHLTVEDAYFKMEILEAYCRTIWVASQLGTPLNTMNPEQLKDLLNIKQNLGIPDPRFGLKECELCDNEQWRPGVTCATTPSASSGGGASQDPATEQAVQAITDQIMSQLGNK

>DDW77_03855
MKVSIIGGGGRVGSCAAFALQCGGIVSEIQLIDANQAMAEGEALDLLHGSAFTADQRITAGSYEQASDSDIFLITAGLRRKPDESRLDLINRNVALFVQILESIQKAGMRQDAIVFVVSNPVDILTHLAGERLGLPWQQVIGLGTMLDSTRFSSLIAEALDLAPTQVKALTLGEHGDSMVPIWSASSVNGLPLTEYPGCGPGFQGQIFTRTRGSGAEVIKRKGGAGWAVGIAIRDVIHAIALDQRRLLPVSSRVQGTYQIRDICLSVPTVVGRGGVHQQVELKLWPKEQTGLQQSARALKETMSKVQL

>DDW77_03860
MIKSLDQKLEAIRANPASKAFIIADAKDADMAFGVRATGGRHYLSAQGERPARFSPEIWSRDEFGFRNLPEFLDIIREVVHQGQVDIVLMSAYVNELLSIKEGLFDSSPITPAARANDATDVWAIRHGCYTAEPAQPFRSASIDHIQCGQIECDRSVDVFPGANLGLYSVTFVNDLTRDKHTLESFKAFREEAEAKRFRYFLEVFNPNVPSGVAPEKMGEFINDHILRSLAGVTDAGRPVFLKIPYHGPRAMEELVQYDPNMIVGVLGGSAGTTYDAFKLIHDAQKYGARVALYGRKINQAEHQLAFIEMLRLITEGVIGPKEAVHAYHGVLQQKGIKAHRSLDRDLAITEQAMSYDESSSGKSRVMMGESPIRGSEKAERQSELPAGKVSDASGQGEAPCAVDWPMLSDGRPDFKTMTAQQRRAYDQDRLKRIFG

>DDW77_03865
MADLENKQPESVDGKFYVDDQCIDCDLCRETAPENFKRQEDGGYSYVYKQPENDDEATQCQEAMEGCPVEAIGEDG

>DDW77_03870
AMLGALVGLGFSFLLVELIEIASPAQNSPIITVYPMVIAVGFSALVGVVAGLFPAFKAAGFHPIQALRYE

>DDW77_03875
MVSPCSRNLLAGWIGCLGLLLFSGCQREADIRVYGVPKQVPYSLPDGWERVENTSAMRLATFRIQGEDSQSAEVAILPMPDLQVGDHEIVNLWRQQLQLDPISEKDVATQSQPVQIGDLQGRQFDLVAPEAAPGEMAGMRIITAFVHAPNGTWFFKLSGENAFLEGQKKTFTDFLSSVDLNSLKESISMVETAASPPPVRPAVASVNESEDLPRWDLPSHWVPTGARSMILASFAADGDEGKVDITVSRLGGGAGGLLPNINRWCQQIGLDAISEEDLPMKTTSINVDGSPATMVFLAGKEKGIAATICPRN

>DDW77_03885
MNKIGIYPGSFDPLTYGHVDVIRRATHLFDSVIVAIATNEAKKALFSKEERAELVRASTEEMDRVSVDIFDGLLVDYAAEQTAKAIIRGLRAISDYEFEFQMALMNRHLNHEIETIFMMPKDKYTFLSSGMVKEVASLGGDISSFVPEPVLHAMNQRFPATNFKSDS

>DDW77_03890
MRFTIHLRDLEKESLRFDGDVEPDEVDWNLNDELIQAKGGLGYSLEIEKHEQNLLIQGQLSQSFVCECVRCLQSFTLPILLDAWSGFAALEGEESLEVVNDLIDLTEILREDVLLALPQHPHCGPQCPGLADPANAKSAPRHSAPDELSSAANSAWDALDHLNLDNDKD

>DDW77_03895
MGVPKRKPSRSAQRKRRASNSVLHLPQLSVCPECAAPYVPHRVCPSCGQYKGKQVVNIESYS

>DDW77_03900
MRIAVDVMGGDHGCGVIVDGVLQALEEFQALQSAILVGRESEIEGALAGRSTSSGRVSVCHAQEVLSMQDKAMDAVRRKKDCSISVGVDLLKHGKADAFLSPGNTGGVVTAATVKLRRLTGLERAGIATVLPAPKNDFVLLDAGANVDSKPLHLAHYAVMGNVYAREVLRITQPRVGLLSVGTEDVKGNDLTLEAFELCKKLDCNFIGNVEGHDLFANRVDVVVCDGFVGNVVLKSCENLAQTMFGWLKEELTATPIRQLGALLAKGAFRTIKGRMDPDAYGGAPLLGLNNNVFIAHGSASAKAVKNAIGMTLRAFEHQINEHMHEAIARANESLKIT

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021