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BMC type: PVM


Organism: Verrucomicrobiales bacterium. Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

            DCY13_20165 (fasta)
                              DCY13_20170 (fasta)
                                     DCY13_20175 (fasta)
                                          DCY13_20180 (fasta)
                                             DCY13_20185 (fasta)
                                                         DCY13_20190 (fasta)
                                                                     DCY13_20200 (fasta)
                                                                             DCY13_20205 (fasta)
                                                                                   DCY13_20210 (fasta) HMMreg00455_2_PVM PVM (details)
                                                                                        DCY13_20215 (fasta) HMMptac_2_mix PVM (details)
                                                                                          DCY13_20220 (fasta) H_purplishGrey PVM (details)
                                                                                            DCY13_20225 (fasta) H_vividBlue PVM (details)
                                                                                                     DCY13_20230 (fasta) HMMacetkin_1 PVM (details)
                                                                                                        DCY13_20235 (fasta)
                                                                                                          DCY13_20240 (fasta) H_blurple PVM (details)
                                                                                                           DCY13_20245 (fasta) P_dirtyPink PVM (details)
                                                                                                                      DCY13_20250 (fasta) HMMalddh_1_eutpdugrm PVM (details)
                                                                                                                              DCY13_20255 (fasta)
                                                                                                                                 DCY13_20260 (fasta)
                                                                                                                                   DCY13_20265 (fasta)
                                                                                                                                     DCY13_20270 (fasta)
                                                                                                                                       DCY13_20275 (fasta)
                                                                                                                                              DCY13_20280 (fasta)
                                                                                                                                                      DCY13_20285 (fasta)
                                                                                                                                                              DCY13_20290 (fasta)
                                                                                                                                                                 DCY13_20295 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_purplishGrey
       H_vividBlue
       H_blurple

BMC-P(map on tree)

       P_dirtyPink

(complete list of loci)

Protein sequences:

>DCY13_20165
MPKTRDNHLNGEAIAIHGAREHNLKNISLGIPRGKFVVVTGVSGSGKSTLAFDLLFAEGQRRFLDSMNTYARQFVEQMSRPDVDLIAGLPPTVSIEQRTSRGGGKSTVATVTEIYQFIRLLYARLGTQHCPDCDQPVREQSADELSWQLVDETRKRGDLLLLAPVVRNRKGFHTDVAEWAAKHGYAEVRADGKMYSTGERLRLDRFKEHDVEVVIGVLERSAGRGSRRAQTARSPDPSPFQLINQALRVGNGVLFAIDNSGKETVHSTHRVCPSCSRSFEPLDPKNFSYNSSQGWCPKCRGFGELFYLPDVERGADADSIEESWWRWANEREPCPECQGRRLNPLARAVRLDVGRASSLSRGASAGSQKVTRSTQAKAQRDRQDAGPTIDFFSDATVTEAGEWFGKLKLAGRASEVARDIVPEINTRLHFLQEVGLGYLQLGRSVTTLSGGEAQRIRLAAQLGSNLSGVLYILDEP

>DCY13_20170
MDTAAWRKAIKYCADPDRARLALERLSRCGIEAELESASPTIAGFAAALFAASEAGTDLLVAHPDCWAAIFDEERLEFPRHEQGLRRDVGEWLEPALKALDYAGALRRLREFKQRDQLRIAVRDLARKGDAAEITRELSNLADICLATVFQICWRQLTERLGTPYHQDVEGDWTATPFTVIGLGKLGGQELNYSSDVDVMFLYGEEGTVFREPPGRKSDPDRSMTNHTFFKRLAETIVAEVARPAAEGQLFRIDVRLRPEGDAGPLVRSLASYENYYAQWGQVWERMMLIKARGVAGDVELAHEFLEMINPFRYPRSLNEGVVREIAAMKERIEVEVVKAGELERNVKLGRGGIREIEFIAQMHQLLHAGRLPFLQGTQTLPTLRNLVRYYLLPGAEAEALAAAYLFLRDTEHRIQMDQHRQSHTLPASKAARERIARLMGCPALAQFDKRLKAHTSFVHRTYKRFFRGESRAGEGQLPADFQEARSAWEQLLGEHGFREPTQAVRLLQGFVHGPGFVHVSPHTERLARGLIGRFLALCPSTALLGRIGKPDVRVLSDPDRVITRIDAFVTAYGTRAGLFETWTRNPKLFELLLLLFDRSEFLAETAIRHPDLVDDLVLSGWLRRRKDAGIILEELRRGMTDKDQHRWLRRYHRSEQMRIGLREILGLMNHDEVMEVLSALGEACLQYGLETVTRRHRLKSAPFAVIGLGKLGGRELNYGSDLDVLFVAPAKSRRLPRLQKIAADLI

>DCY13_20175
RIDFSLLAGYGSYDQLFGGAELDQYNLWGIGHTARLRGMLSTKTVNAAYTYGIPEFLARNLGLYATIDALLREELTFERQELATSIGLRKSFPVSRMQLGLRYSYQFLKAQDESDTTLTVEDFTRVSAVILDGQIERRDNPLAPRRGYRAFGNIEVANPALASEAQYELLQAGFSGHLPLRRGLILHGALQHGVIFSPEPAVDLPFNKRFIPGGENSVRGYRRGGASPYNAAGEQIGAETFLQWNLELEQYLTERWSIVAFLDGVGIAADLENYPFDEVLWSVGGGIRWNSIIGPVRVEYGYNLTPRTFDPEGTLHVSIGYPF

>DCY13_20180
MLTRLLAGALVWIALVSNTDAADTSAPGVLRLATFDVDATPPIGSQMAYDAVTNTWDLGLRARGIVLQGAGEPIVLCAIDWIGLANGAHDAFREGLARAAGTTRERVAVHALHQHDAPLADFTAEKILRDEGLEPLVFESSFQRATLANLEQAVRESLPLARPVSHVGRGVARVEKVASNRRIPGPDGKIRAVRYTATADPALRAEPEGLIDPEVSVVSLWEGDTPLAVLSYYATHPQS

>DCY13_20185
MTFKTKQNQQPASTEAELQILVDAAIHKRERFTFEKAPGHSLAAAEYGDDGIILELHRGKKWDGWISSPREAQSARDFFIQYFREPLSASGQIEKAGEWHEVGVFPPIVWLVALGSLLAVVIWYLII

>DCY13_20190
MNSQIEQLSKALHFLFWIRFVPSVHLWPSVSTCGSRSLSRSQSMPDAIPQFAIVGHPNEGKSSVVATLAEDDQVRISEVPGETIAARAYPVQVDGREILRFIDTPGFQHPRQLLDWMKPRAGSAKNLAGDFLAAHRDQPELGQELELLTPLADGSGVIYVVDGSRPVRAHDLAEMEILRLCGNPRLALINPKERETAFMEEWKAAAARCFNSIRTFNAVQATYAERIALLESLKSIHQDWEPALARAIDAFRADWTRRNQRVAGVICDLLRRALTHVESRNVFQPREEDPAKVELVTQYQRAISRLERRAQADIRQLYRHNIFQLELPEQSVLREDLFTEKTWQLLGLNKKQIITAAAILGAGAGVKLDLIFAHMTFGLFTLSGAALGAAAAWFKGENMARARVKHLKLGGVQVSVGPNQNPQFPFVLIDRLLLYYQSVINWAHARRDQPAVIEISHETKAGYTARWTNDQRKVCLNFIKSLARDNPAKQDEAERELQKMIESLLPQLGEDARGKA

>DCY13_20200
MHDSPSLDPLPHPRASVRGWQLADVIDFEFLLEQDGERPLADLETRDREFVQQAAASEAGLPRDRRRLFRAWLEKRRSTLAGQPLPGAIAVAAWRLLAKAIALSALLLGGLTAYNLLRYDGAQPVNVATYLGWLVLVQMGLATLAFVLLAVRRAGWLSLETSLLAGLVRWSWSRFSLRINRHLLDRIPAGQRQSIAAFLGGSSNFRQLYGGATWWPVVGVLQWFGVCFNVAAIATTIALVVFSDRAFGWQSAVNFSPEQIHQLTRTLAAPWSSLVPAAAAPTLEQIAGSRIILKDGIRQLATENLVAWWPFLIAAVSVYGLLPRLLLWAATLFLSASALARLRFEHIACDRLHERLTAAHLRSQAIAPEPAGDLSGTPATPSQDGGSTSGRSGAPTAAVILVSGELLQQLDREACGGRLEARFRLRAEVWLGWAESQAEQGPIIDQVKADCALSVSGVVVLLEEAWQPPIAEKLAGIRRLREAIGSKRKLLVVLVGRPKAGDLLTPVRPADLRVWQQRLATLADPFLRVESLNQ

>DCY13_20205
MLGPKRFQLVFAAGMAGGCLLHADTVLKVELGGSTGKVVTSSTEAVGTSTNTAHGSHAGTAGFGRVGAGSRVTIASTGNDPGLNAVSTFIDNFTVTSPSYASFVRGTFIATVSFNGGLTLAPSGLSPGDGARGGTTYRLNVFHSENINPNSSGFPVISQTGRLDFDRLFSEEVTTTGIVPPATQFQVEIPFKFGIPTQIKMELLVASFAAITDLEPAGATLDANAHFAMGARWEGIADVRHISGTPVTEYLIDTESGINWLEPQPVEYVTAIHAALSPPNGASERFLEMVVTRRKPDGSFQYQIDASSMLSGWMQLEPGTGNPLAQILSTNSIDQFTEQIVVRRTTPYSPTGNSYLRIQALPME

>DCY13_20210
MTAEERQFRLEEHLKKVEFASLAELSELVDVSESTVRRDLQILEGKGTLQRTHGGARSINLRSDEYIFSKRDTLQADEKDAIGKACADLIGPGQTVILDAGTTVFHVAKHLASKKPHIVTNSLPVANLYASNHELEVVVSGGVIYPRLGVLVGPIAVETFSKIHADVAILSGAGITEEGISNSHGLLIDIQKAMLANAQKIIFCLDHTKFGRKSFSPLCDLNVIDTVVTDAQTPEPMLEMLRGRDIRVVVGS

>DCY13_20215
MTSAPHRAVVEHLVRQAVYQRLGKPMPSASSGPSPLVVNVSARHCHLTQDAVEALFGKGHQLTVHKWLYQEGQFAAKETVTLVGPRSRVISNLRILGPCRTLNQVELSYTDGIALGFNLPHRSSGDIKGTLGCMLMGPAGFFEMPDGVIRAMRHVHMHPTDADHYRVKAGDWMKLKIGGDCGLTLDRMLVRVDKSFKLEVHIDTDEGNACNLQPDTPVELVK

>DCY13_20220
MSEALGMIETKGYVGSVEASDAMVKAANVSLVKTISIGGGMITVLCRGDVGSVKAAVDAGSKAASKIGELVASHIIARPHEDLTTAFVGGSAKK

>DCY13_20225
MALQAIGMIETKGLCALLEASDAALKAANVTMSGWEKVGSGYVTAFFKGDVAAVKAATDAGASAAAQVGQVVSVQVIPRPHEDLVGLGKWLS

>DCY13_20230
MKILVANIGSTSLKWRLFDFSDNAERLLHKGGFERVTDYPKAIEDCLAQLKEAGAIASESDLAAVGFKTVLAKDVTGCVRLDDRVLGAMEAYNGLAPAHNPPYITGIRLFAKRMPGVPLVGLFETAFYQFAPPAMMRYAVPRGWYEIGVRRFGFHGASHKFIAERSAEMLDREDVAERARNLYRDGAKDGVSGGDLRVISCHLGGSSSITGIRNGVAIGNSLGMSPQSGLPHNNRVGDLDAEAIPYAVKTLGISIEEAQRQLTKESGLKGVSGVSNDIRDIATAAEQGNADAQLGLDLLVSEARRWIGGYFFQLNGADAIVFTAGIGENRASIRAGICANLDQLGIELDDELNNAAQGREAVISKPGSKVKVLVIPTNEELVVARETRRLLERN

>DCY13_20235
MKRQPKLLGSAPVLLVKDVVKAADYYRDQLGFTYERFWGEPPGFCMVQRDGFVVMLAQVHPGTPLKPHWKVVGNMWNAYFWCDDVEALHDEFVKRGARIDYGLGVKDYGVKEFGIQDLDDHDIAFGQRL

>DCY13_20240
MAQQAIGMIETRGLVALVEATDAMLKAANVQLAGPMTQVGNALVTSVVVGDVAAVKAAVDAGAQAVKSMKGEVVSVHVIARPHNETDAVLPKKK

>DCY13_20245
MFLAKVEGSVVATKKDEGMSGRKLLLLRPMLVDDKDPSKFKPGSNT

>DCY13_20250
MSTAINENLVRDIVAEVLGRLGGAPAPKLPSPAPASGGKTDCGCHGKKGGGTGQHGVFADADSACDAAQQAFLQLQKAGVETRAKICAIVKNLCETNAVEWGRIELEETKIGRLDHKIGKLQIIKLVPGVEWMKPNGFSGDHGITMEEFTPFGVVGAVTPSTHSIPTLAGNIVNIIAAGNAVVFNAHPAAARCAALAVREFNKAIERETGIRNVACIIEQPTMESFAAMCANENVKLLLVTGGPGVVKAAMKTGKRAICAGPGNPPVLVDGTSCLKSAAKKIIEGAAFDNNLLCIGEKQVFVLEQFADKLMSSLEDAGAAKLNSGQVDSLTKAAFTFKEGQGGGCAHASVNKDFIGKDAPVLAKAAGVNVKPGTELLFGETDDQHAFVQEEQMMPFLPIVRVKSVEEGIEKSRQSEHGYKHTSIIHSHDVNHMTAMARALDTTLFIKNGPCMAGLGLGGEGYLSYSIATPTGEGVTNPKTFTRVRRCVMVDNLRIY

>DCY13_20255
TITGGTNHGVVSCDVFDTGDGGVSLAGGDRQSLTPGGHFVENCHFQRQGRWSKCYVPAISLTGVGLKASHNLIHDHPHAAVLFWGNDHLIEFNDIHRIALETGDVGAIYTGRDFSFRGNRIRHNYIHETGGVGMGSMGVYMDDCVSGTEVFGNVFYKVHWAMFIGGGRDHLVENNLFVDCDPAVRADGRGLDQAPVWRSMVEDYMRRQLAAVPATLYRERYPALRSLDAHYGAPGSAAITGTAFTGIPPEHNVIVRNVAVGHWFDAGWHAKPDLFDVRDNFVTTDFGQVSGAAEGFQLPADSPAWKLGFKVIPFREIGLRNDQDRRGLARYD

>DCY13_20260
MSRLDPDRRLVATAPPYGHYGFRKGQRFHFLNVLEELDQPGEWFLDRARGILYFWPPGPLASDNVVLSLLDQPLIRLGDASHVVIQGLELTATRGNGVEISGGTNVRIQGCRLRNLGNGGVTITG

>DCY13_20265
AGITNFGSLESRGFSRPTTPAHSELFHDNRPMTLARWPDEGAWEKIAGFPAASGQGDGHGGQIGELAGGFHYQGDRPRRWRDTGDLWVHG

>DCY13_20270
FASLERARDAVRELIRGGQLPEDGVTIWLHAGDYVRKRALELTPADSGTADGPVIWRAYRDDRVRLLGGRVLTGFQPVTEPEVLARFDEGVRGQ

>DCY13_20275
RRLVERGVRFVQLFVNGQIWDNHENIRKGLADCCRKTDQPAAALVIDLKARGLLDTTLVHWGGEIGRLPVTENHGSAEKAGRDHNGQGFSTWLAGGGIRGGTIYGATDEFGHKAV

>DCY13_20280
MNRRTFLRTASVTTAAFAAVPYIRAASSGRKLRTALIGSGWWGKNILREAMASGRCQVVALADVDANILEISAEQVNDLSGDTPKLYRDYRELLTREKPDVVIIATPDHWHALNTIDALKAGAHVFVEKPTGHSVNESRAMLKAARETGRIVQVGLHRRIGPHHVSAMNFLKSGAVGDVGMVRLFAHGGGAEESPSPNEEAPESMDWDFWCGPAPLRPFNKKLHPGGWRNFLDYGNGTLGDWGVHWLDQVLWWNGEQYPRRVFCSGGRPVRGEAVNDGRGQTSDAPDHQVA

>DCY13_20285
MHQLPSILRFVRCALTVAAAVGFALPAASADWPHFRGPNRNGISPETVPANPWPGGEPKILWKADVGLGHSSFAVADGRAFTAGHADGTDTFFAFDARTGKLIWKHAYAAELGDKYYEGGTTGAPTVDGGRVYWSSKWGDVFCFNAADGKIIWSKQVQKETGAPVPTWGFTGGPLAHENLLILNIGEAGLALDKMTGAIVWKSDTKDAGYSSPLPVKLGDTSQVLLANTEHYLGLDPKTGRELWRHKWLTQYGVNAADPIVSGDRVFISSGYGKGGVMLDLSSGQPKEAWKTKDLRTQFNTAVLFEGHLYGTDGDTTSKAALKCLDFATGRVKWAQPNFGSGGIIIADGKLIALSGG

>DCY13_20290
SCLLTGIELFPGNIQGGSHTPAGWASGISIDQEIRNYLQSRPDTRTRFGSLEFGVGVSDRADPWTRMSYAGPNKPIAPISDPYQIYGKLYGELKDKESLQSILDDVQEDLRKVRRKISAEDRRLLEEHEALVRQMELDLENADEQQLVATPPSLEEGVADQNDNVPKLSRMQIDILINSFVNDMTRVATLQYTKSVGNARMRWLDINEGHHTLSHEPDKNEEAATHLTKINHWFAGELAYLAQRLAGTPEPGGEGSLLDNTLIVWTNELGKGNSHTLNDIPFVLLGNGFNFKMGRSLKLKGVPHNRLHMALAHAVGHRIESFGKASLCEGGPLDLA

>DCY13_20295
MLVIGLVVVGGKRDEGPVFEGRTLGEWLGGIDLSHWEDRRSPQFLEISNAVTQIGTNGFPSLLRWIEYEPSAAAIRFWTAFDQIDDHLPSTQFEDRIRIFARRDFDRAEATVVAFRVLGEQAKPCIPQLVSTATTSTNTTIAR

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021