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BMC type: PVM


Organism: Planctomycetaceae bacterium. Bacteria; Planctomycetes; Planctomycetia; Planctomycetales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

                 DCM07_24765 (fasta)
                     DCM07_24770 (fasta)
                                 DCM07_24775 (fasta) HMMnopfamclust22_1_pvm PVM (details)
                                          DCM07_24780 (fasta) HMM02866_1_pvmeut PVM (details)
                                                  DCM07_24785 (fasta) HMMaldol_2_pvm1 PVM (details)
                                                    DCM07_24790 (fasta) P_adobe PVM (details)
                                                          DCM07_24795 (fasta) HMM02441_01 PVM (details)
                                                            DCM07_24800 (fasta) P_slate PVM (details)
                                                                   DCM07_24805 (fasta) HMMalddh_1_eutpdugrm PVM (details)
                                                                         DCM07_24810 (fasta) HMMalddh_1_eutpdugrm PVM (details)
                                                                              DCM07_24815 (fasta)
                                                                                 DCM07_24820 (fasta) P_dirtyPink PVM (details)
                                                                                            DCM07_24825 (fasta) HMMacetkin_1 PVM (details)
                                                                                              DCM07_24830 (fasta) H_purplishGrey PVM (details)
                                                                                                DCM07_24835 (fasta) H_vividBlue PVM (details)
                                                                                                       DCM07_24840 (fasta) HMMptac_2_mix PVM (details)
                                                                                                              DCM07_24845 (fasta) HMMreg00455_2_PVM PVM (details)
                                                                                                                DCM07_24850 (fasta)
                                                                                                                      DCM07_24860 (fasta)
                                                                                                                        DCM07_24865 (fasta)
                                                                                                                               DCM07_24870 (fasta)
                                                                                                                                  DCM07_24875 (fasta)
                                                                                                                                               DCM07_24880 (fasta)
                                                                                                                                                     DCM07_24885 (fasta)
                                                                                                                                                      DCM07_24890 (fasta)
                                                                                                                                                        DCM07_24895 (fasta)
                                                                                                                                                             DCM07_24900 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_purplishGrey
       H_vividBlue

BMC-P(map on tree)

       P_dirtyPink
       P_adobe
       P_slate

(complete list of loci)

Protein sequences:

>DCM07_24765
FPSRICLEWAIIGGAWLPLTLWCVESFFQTRYWRYAILLCFALTMQILPGHFNLAFITQLMLVVYIPARIWFSRDETTDALKPYRRRTIILLLFAFISTYALSAVQLAPTWELKQLSQRAEVGERSHQPGYGHIPAWYLSQVVAPWAWYPYEVNLDAGLAPGDDATNQVEAHLYFGIVSILLLIYGTWSGAWTRDRRLILLAVIGFLALLYTPGWFLPLTRHLPGFSFFTGPGRYGILTTFAVAVIAGVCLERLTTNWHRHLRLLAVAVICLITTADFWVVSRYVTYAAIIPNPPINNVDQSALKKIVTEYGKPVRLFAPGANLPTLLGVSSTPVYLGIGPEQYFNPELTMPQPLPFKEPATPEQIDWLRKAGVTHILSQHRLDLNHWPVKPVWSDFDAVINPAWGRFDEPLYFYELQDSRGRLAWLHPEANQSATITEYRANEIKIEAETPTENTLILTDLMYPGWKVYVDGQPAEAELIEGMYRGVKLEAGKHEVVWAYQSGWFLIGAIISCVTLLLIFTIAHFRFWHPILLQMKQRTVEVQPDVPVDKITKKRK

>DCM07_24770
MSRSSKQKTRSTQPETASPAGTPVFAGTILAIAIGLTWIFWYGLWAGGGLIGGDLYTYFFPQKTFFAERLQAGEFPLWNSNIGHGVPLVAESQTGAFYPFNYFAYRFLPVNTAYNFVQILHYILAFVFTGLYVKRLGYSLVAALF

>DCM07_24775
MEKSLDRKLQSIHKDPSGSKEFIIADAKDADMAFGIGAPGLSPERHDQELKYKTLAEYREQIREVIKQEVVDIVLMSASTSEKLTIDERLFDNSPITPAARANDTTDVHVPRGGKIHLSPAKPFRSASLDHIQCGHLDCAPEERAYGADLGLYSVTFNNNLEEDLATLERYKEFREEAERKKFRHFLEIFDPNISTAIAADLAPGFINDLIARTLAGVATAGRPTFLKMVYHGPRAMEELVAYDPHLIVGILGGSAGTTLDAFQLIYDAKKYGGRVALFGRKINQAEHQLAFIQFLRYLVEDKIQPVEAVKAYHGVLQELGIKPTRELDVDLTYQTAVMSYGGEDGKTFSFPATKTASKPAAGSAKTTSAKPATTNGKGTPDFAAMSSAEKLAYHQDRLNRMFGE

>DCM07_24780
MNVSIIGGGGLVGSCAAFALQAGGIVREIALVDVNQDLVEGQALDLLHGSSLTADQKIYAGGTELVKDSDVIVITAGLRRKPDESRLDLINRNVALFKNILEDVKRVGTKPGAIVFVVSNPVDVLTYLAMKELGLPPQQGIGLGTVLDTTRLRSMLAARLDVPPTQVSTLILGEHGDSMVPIWSAAQIGGLPLEKFPGCNPSLIAEVEKKTRGSGAEVIKKKGGAGFAVGVSIADVVHCIALDQRRILPVSSLQNGAFGLRDVCISVPTVMGRSGVMKHLEIELWPKEQLALTQSGKVLRETVDKVLGGH

>DCM07_24785
MSNQWTSGIHDRKLKEEICEIGRRVYNKGFAAANDGNISIRVGENEVLCSPTMICKGFMKPDDICAVDLDGNQIAGTRKRTSEILLHLAIMKERPDVKAVVHCHPPHATAFAVAREPIPQCVLPEVEVFMGEVPMAPYETPGGQKFADTVVPFLKGGTNTIILTGHGTVTFGKSLEDAYWKTEILDAYCNILLLSKQLGRVTYFSENETRELLDLKKKLGFDDPRFHVEDCDLCGNSAFRDGYKEGIPQQKSFEPAPSYPGYLSKPSTQTTPTTNNGNSDHLIKAITDQVMSALGK

>DCM07_24790
MKIAEVIGKVTLSRKHPSLDGARWLIAIPLKSDELNSKKKKKTEPFIIYDELGASPGCQIAVSEGAEAAAPFHPEVKPIDAYVSAILDQVEVY

>DCM07_24795
MQFSEELVNQVVANVLSNLSRQGQVAQHTGAAASDASVVLTEKVITADLLSAKVKGQAAVGIVAGAILTPTAKDYIRQNQISVHRASTSSASTQQRSQWRVIVLTHSSAVENALTDIEQQTGSRWSQELSTSLDHAVQDATSSLCRADAAGVVLFASAAEKAACLANRNQKVRGAAVQDVNHLRDVISQMSPNLICVNPKQKSFIELRNLVKTFVKAGIPQGN

>DCM07_24800
MLTGQVIGRATATAKHPSLAGWRLLLVQTLDIKGNADGFPELVIDRLGCGKGDIVLLTSDGAAVRDMVGTNNTPIRWATMGVIDRE

>DCM07_24805
ARAALAAKKRAIVAGPGNPPVVVDETADIENAAQSIIAGAAYDNNLLCIGEKEVFAVESIFNELMSAMGRHGGYQLNDQQVTQLTALAFSPPTEPGGHAVLNRDLVGKDAAVLAGLIGVNVPPGTQLLYGETDTMTPFVPEEQMMPFVPFVRCRNADHGIELAKEFEHGFRHTSMIHSRNIETITKMGRIMDTTLFVQNGPCGAALGNGGEGYASFSIATPTGEGVTNPMTFTRFRRSTTVGHLRVI

>DCM07_24810
MQATEEAIRSVVQEVLSQLNNKGGYGSASATTQTDGDWGVFRSVDQAVAAATAGQKQLLNATLADRAKALEIVRQICTSQADELGRMEMEETKIGRLDHKIEKLHLIKGIPGMEFMRTEAVSGDYGIGITEYAPFGVIGAITPVTHSLPTLACNFINMVASGNTLVVNPHPGGAKVACEGVRRFNKAIYQATGLQNLVTIVETPTLETADQIFNHRGVPLLCVTGG

>DCM07_24815
MSRELPQITLQQRQMMMTVIWLALILGVVTFGIIVTSIGLKEEPGKGLPIMTYLGMGIAALMLVLRMVVPNLVARNQFTQAMQEAQAEGNQDEEQLLGTFYQIFLVRLIIGMALLEGAAMLNLFAVVIEKQKLAFIPVVILLLVMIASMPTKSKLDAWIRNQMENYNLEHQN

>DCM07_24820
MFIGRITGSVVSSQKVETMVGQKLLIVEPLRVNEKDQSDLTPTGRSFIVVDTVGAGQGEIVLCVQGSSARFTPETKSLPIDAAIIGIVDQVHIGSREIFNSTD

>DCM07_24825
MKVLVANLGSTSFKYRLFDMPAEVQLARGGIDRIGGEQSFCFVEIGAHREEHEQNVPDHAAAVNLCLSQLTNSDWGCLDSADEVAGIGFKAVFAGNMSGIRLVDEALLTKMEALADIAPAHNPPYARAMRQLRQAFPEIPLVAALETAFHETIPAENRAYAIPHEWQEEYEVQRWGFHGASHRYIGSRMAELTGKDDLKVISCHLGGSSSVCAIESGVSKANSLGMSPQTGLPHNNRVGDFDPFALPVLMKATGKSLAELLEDLSSKGGLLGMSGLSGDCRDLEEAAAKGHKRAQLALGVFHSAIRQYLGAYMTVLGGVDAIVFTGGIGENSVSLREKVCSNLEWAGIRLDSEKNKSASHEAQIQADDSKVQIWVVPTNEEIVVGRQTVEVIEGRS

>DCM07_24830
MSSEAIGLIETKGLVAQIEASDAMLKAANVTLVDQIQIGGAYITTVIQGDIGSVRAAVDAGAAAASQIGELVGAHVIARPSAGLMSNFI

>DCM07_24835
MAKAMEALGMVETKGLISLIEAADAMLKAANVQMIGWEKVGSGLTTGFVVGDVAAVKAAVDAGAAAASKVGEVVSVQVIPRPHEELASVLPKPAAKKS

>DCM07_24840
MTQLSNSISRSQVEQLVRQALSQQMGGVASAPQTAPNPLVVNISARHIHLSQEHLEILFGKGAQLEVQKDLYQEGYFAATQTVAVVGPRRRMIPNVRVLGPCRGDTQVELAFTDTISLGLDVPIRISGDLKGTPGCVLMGPKGVVELEFGVIRAARHVHMSPADCAYYGCSNGDNLHLRIESAGCTTVLEDVVVRENPEVKLEVHIDTDEGNAVDLDHATSVKLYVPEGCKCKHS

>DCM07_24845
MLLDERRESILKIVENKGFVSLVDLMDSVGASESTIRRDLEYLDGIGQIRRTRGGAAYSGESLSTFEDRSFMSSRQKRQIAQAVANMISPGEAVLMDGGTTTLEVARQLAGKQLQVVTNSLPIANLLVNQPEIDLMLIGGFLFPKTGVALGKTAVESLKSVHVRRLIISVGGITEDGLYNSNMLLVETEQQMFEAAEEVIVVTDSTKFGHSALAYLCPLDTVDHIVVDDGITEEWKDVIRKAGIELTVVET

>DCM07_24850
MEGGMKIRYPFTVGLLSAVISGCASSPDRLTSDLGESKPATMALESPAPEKLTGDEISGPAVSTDPETKLVVHEQAEELPFAEYDIPLLSVSRTP

>DCM07_24860
MNVNHTRSSPLHPPLKLAVLISGGGTTLTNFLDKKAAGELDIEVPLVIASRPDCGGVAKAKAAGLRCEVVRRRDFQDIGEFSTTIFGLCREVGADLVTLAGYLSLIHIPEDYQHRVMNIHPALIPAFCGHGFYGHKVHEAVVARGVKVSGCTVHFADNEYDHGPIIGQKTVPVSGTDTPDQVAANVFQAECELYPEMIRLFAAGKIKVVERRTIIQD

>DCM07_24865
AGTLIILIAGIAIAIWKASQRDKRFRDRRLQKNEDQVDFSKLETQSDSLPKKTASETKTPDIKPPAGSDQ

>DCM07_24870
MKPWEQDMLSYIRNQGVAVCLTAMVLQTAFADESQTDPFRPFPDQLAPSLFNEVEDKAFGGILEEEKALYYYVLKHLQETSLADQKQAAEFNLQQRRSEMKLFREHPEREFPVFLDLFKNSDRYKGRLVTLTGRVRKLMHYPAADDNQYGINTLYEAWMFTDDSQQNPTVVICTEVPPALKDGLPDGTDVIDHVTVTGYLFKMYVYNAQDTSRVAPLILAKQLEWNPRTVDEQGGRLFSQILAG

>DCM07_24875
MAENVLEFTDANFQSEVLEASEPVLVDFWAPWCGPCKMMMPTIEEIASDYSGRVRVGKLNTDENPGIASASSINAIPTVMLYKNGEVVEKFVGVTPKERFAASLDSQL

>DCM07_24880
MSEETRPDQKSQAPSPFAGVKRPASDSADSRPLNSAPGIERRADAPHSFTEPGVPEEGSFFSDQKQRALEENLSHAGQAAEIQTQGAAEAGASLTGAELLSQAGEIANYLKSQFAEISRREQTLTSQLNEIDNERRKIRMWVGQIEEQYDEREASVRDKETELIRKAVECEKLAKTVQREQEKVFEAQDSLEQERAEMRDHILREFAEQRETLERQKLDLINEQKRIREQVLESLSEQRNELEQARAEWQGVKQTELNHLKREREVHEEAVRKVETELNSRKEKFELELKTRQSDWDSKRQAELEALESRKRDFVISSEEIEHQLKIQREDLQREYSAREEEFDQKRTLIENRIKFQENHLLRLRKQIEKEQHDFQRQQQIQQQQHEQNERIHILRMKQLDRFRDLLQQREQSLTKERALHAELRRSVERYEQNQKQRMSGEYEVW

>DCM07_24885
ERDAQKAELRRQHDMLALHAENLERRRERLDTLRAEVEETHRGTLEMRLALEEGWAQLTQLEGDDAARERLEKAREALAAHYRQLRESLSVERQELDHSQELFHRHRDEFRQERQDLSEWVAERDEQLRQRSEQLRFEAEQLAVRDAAWGQKRENWLQEKVSAEEVIRNLLEQLTELTVGQGAAIQLAAKKSQRSHVQNTAAKPVDGLAKETESESIDEILDPRD

>DCM07_24890
MADAPKKMIMGSMAVSGIVALLALADIAIGIPFRGSMMMDIMFLISAGLVLFLCWDAWKDLR

>DCM07_24895
EGHWFQIGNQQIHLILEHDQSGRAGNAGPQQNTRTHHFAFQVDDAKSAYEKAVERGIPIVSPPKSRPDGATQTFVNDPDGHIIELCSLS

>DCM07_24900
SILSESTFRAMIAATIATLLLTPYLIQLAPGAADLIRRFLQRNSNQPDALTAATLANPEQVTKAESDYILILGFGPAGQRVAGELLQVGLKKIVVIDLNHENLHVARQYGLQAQLGDATQIEVLEHAGLYRARLVIITLPSPTIGRQIIHLVRQLAPGTSLYVRCRYHLHHW

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021