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BMC type: PVM


Organism: Verrucomicrobiales bacterium. Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       CMO57_02975 (fasta) HMMabhyd_3_rmm1 RMM1 (details)
               CMO57_02980 (fasta) HMM00107alcdh_2_mic1mix EUT2x (details)
                     CMO57_02985 (fasta)
                         CMO57_02990 (fasta)
                          CMO57_02995 (fasta)
                                CMO57_03000 (fasta)
                                       CMO57_03005 (fasta)
                                                 CMO57_03010 (fasta)
                                                         CMO57_03015 (fasta) HMMnopfamclust22_1_pvm PVM (details)
                                                                CMO57_03020 (fasta) HMMaldol_4_pvm2 PVM (details)
                                                                  CMO57_03025 (fasta) P_adobe PVM (details)
                                                                    CMO57_03030 (fasta) P_slate PVM (details)
                                                                              CMO57_03035 (fasta) HMMalddh_1_eutpdugrm PVM (details)
                                                                                CMO57_03040 (fasta) P_dirtyPink PVM (details)
                                                                                  CMO57_03045 (fasta) H_blurple PVM (details)
                                                                                          CMO57_03050 (fasta) HMMacetkin_1 PVM (details)
                                                                                           CMO57_03055 (fasta) H_vividBlue PVM (details)
                                                                                             CMO57_03060 (fasta) H_purplishGrey PVM (details)
                                                                                                 CMO57_03065 (fasta) HMMptac_2_mix PVM (details)
                                                                                                      CMO57_03070 (fasta) HMMreg08220_2_PVM PVM (details)
                                                                                                       CMO57_03075 (fasta)
                                                                                                             CMO57_03080 (fasta) HMM02441_01 MUF2 (details)
                                                                                                                      CMO57_03085 (fasta)
                                                                                                                        CMO57_03090 (fasta)
                                                                                                                                                 CMO57_03095 (fasta)
                                                                                                                                                     CMO57_03100 (fasta)
                                                                                                                                                        CMO57_03105 (fasta)
                                                                                                                                                              CMO57_03110 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_purplishGrey
       H_vividBlue
       H_blurple

BMC-P(map on tree)

       P_dirtyPink
       P_adobe
       P_slate

(complete list of loci)

Protein sequences:

>CMO57_02975
MNKKILLTAAVLLPLSLFGQEKKGPYESDFDLPGSRSEVYKTIGDTKLKIYIYEPKSHKANAKKPAIVFFFGGGWRGGTPKQFQEHCRYLASMGMVAMTADYRVSSRQGSKPFHCVRDGKSAVRWIRQNADRLGVDSNRVVSSGGSAGGHVAASTGILPKHEEPGENIKVSSVPNALVLYNPVLITAEAKGLKTFGADKXGKLKTRLGVQDPTTISPYHNIRKALPPTLILHGKADTTVPYSNAEAYLKKATAIGLRVELEGYEDMPHGFFNLGRNDNKMFLATVTRMHEFLRSIEYLKGKPRVGEFLNSLSKKE

>CMO57_02980
MKTRAAVIRQMELPRPYSKSLPLSIEEVELDGPKEGEVLVQVAGAGLCHSDLSVINGSXPRPVPMVMGHEAAGIVRDVGPGVKDLKPDDHVVFSFVPCCGGCSMCAVGRAPLCEPAYEAAITGQLLHGGRRFSLPGGEEINHHQGVSGYSEFTVAAPESLIKIEKSYPIEMATLFGCAIMTGVGAVVNTAKVQPGTTTAVFGAGGVGLSVVLGLKLVGAYPIIAVDTLMNKLDLAKQAGATHLINASEVDPVSALRDLTGGGATDVFEAVGSEKALGQAYAATRKGGRTITVGLPSPXSELRIPALSIVAEERQLLGSYMGSCVPKRDIPRFLELYREGRLQVDVLNSRFISLDQVNEGFDALDQGEVARQIIKFDI

>CMO57_02985
MIEISEXLTNERLDRYLATKLPNVSRGGIQRLLREGNILVNGKKAKPTQHPVAGQKIEITWPNPKEIKAKPQNLPLNILFEDDXLIVVNKAAGMPTHPSNGHDYDTLVNALLHHCASSLSGVGGAVRPGIVHRLDMDTSGCLVAAKNDETHLSLADQFKNREVDKIYNAIVVGHLEKDDGEIDAPISRHSTNRKMMSVQPNASRDARTTWRVIERLNKCTLVETKIHTGRTHQIRVHFKYIGFPLIGDIVYGPKSTSQLANDIGIKPKRQMLHAKHLXFTHPKTGEKKSFEAPWPNDFKQTVNILRNKKL

>CMO57_02990
MIEIWXGFGLVLLVMFIGMIGNLIPGVPGTSLIFTAGIIHQLYFGDSGGIGWFWIFVLGILMAASFLIDYIASLLGAKTLGATWRGMLGALIGIILGLILLPPFGIIIGPFVGAIIFEWAFGREVREASKAGIGAVVGVLLGMVGSAICGLAMLGVFLFTAFPDDNIETTTPKIEFQQNNKLEEGSDSNPNTSNVGNN

>CMO57_02995
MADKQPXKKTELYGQNMELLGEDLEKSNAALGVDAKNDQLGIXAIEAMQSLLKXDQSDPN

>CMO57_03000
MKSFYFSTRTAYLMIAVTATLLLHNVXHTAXGWLVDFEKAKAQAAKEGKSLLMEFTGSDWCPPCKSLAEKVLTKEVFKKEVPKDFVLLKLDNPRDKSKQTPEEIEQYKTLSKKYGIQGVPTIFLADAKGRPYWQTVGYSGDPADKYVANLKDQLKTLAKRDAAFAKASEASGSEKAKHIADGLSLVSSELALNTYSDEVAEIIKLDANNEAGLKSKYEGLKNSVVFKADLENVMRTGGDDPKAVLAAIDKLIEEKKPTGEARQEALFYKGSIYFRDDKAKAKATLLEAQKLAPASETGKRITGILDRFFKE

>CMO57_03005
MSDKKFNIAIVGLGFGAEFIPIHQAHPNANLVAVCRRNEAEMNAVANQFGIEKRYTDYDELLKDPEIDAVHINSPIPDHAPQSLKALRAGKHVMCTVPMATTIEECEELCKVVDETGLKYMMAETVVYSREFLFIKDLYDKGELGKLQYLAASXPQDMDGWPXYWEEMIPMHYATHVVSPCLGMVDGLAEYVSCFGSGTVRDDIAQKSGNKFAVESCHIKIKDSDLSAHIWRFLYDVARQYRESIDVYGSKKSFEWTLVEGEPSVLHVAKRPEAEIPEKVEIPDFAHLLPEPIQKFTQSIEDADHLSFVQGGGHGGSHPHMVNEFFSALTEDRQPWPNAKTSANWTCVGICAHQSAEQGGVRIDLPSFTI

>CMO57_03010
MAILAAGVGFAIRGGIFDNWGDEYGFTGLQLGAIGGMGFSGFCFGIIIGGVVCDKIGYGKLVFVAFAFHILSAIITFTAAGDTAYTSLYWGMFCFAFANGTLEAVANPLVATLFPDKRNHYLNILHASWPAGMVIGGVVGWVLDDKLNWSWQLQLSLYLIPTVIYGLMFLGQKYPKSEAAEKGLSLGEMFKDVGMLGGLIICYLLVLFFQGILPADFSWIAWIIGGGLLISIAVITGFAVGHWLIFVLFIAHALVGAVELGTDGWIQNITGNILSSEEGKILFVWTSLMMFGLRFCAHWLEQTLNLKPVTLLFVCAVLACIGLNVVSTATAFTGAIIALSIYAFGKTFFWPTMLAVASDRFPRSGAIAISIMGGIGMMSSGLLGSPGLGYAKDRFAGEVLEEKNAALYQEYKAETSSKWLFLKEVNGIDAKKLGEITKKQASEQSDDEKAVAQASIEGDRLTLKADSLIPAAMAVIYLLLFFYFKSIGGYKPLTIEDLKKE

>CMO57_03015
MKSLDTKLAAYRENPAVKDSFIIADAKDPDMAFGVRGLGKRLYLSERGSQPAQFSPEIWTRDEFGYRNLPEFLDIIREVVAQGLVDIMLMSAHVNEQLTIKEGLFRDSHITPAARANDATDVWAVRHGNYLSHPAQSFRSASIDHIQCGKLDCDRSENEFSGANLGLYSVTYLNDLERDKRTLEAFHEFREEAERKNFRYFLEVFDPNLDSGISPEDLGGFINDQILRTLAGITEAGRPVFLKIVYHGPRYMEEICQYDSNMAVGVLGGSAGTTYDAFRLLHDAKKYGARLALFGRKINNAEHQLAFIEFLRLIAEDQISPEEAVHAYHGVLQGKGIIPNRTLEKDLELTEQAMRYGNEEGKTIITMTKNPLAKQNKPKAKSNIIANSDWPKDINGRPDFASMTSDQRLAYHTRRLGL

>CMO57_03020
MKKVYSVKDIDELHRGGGLESIPSDAVITPSARDRLNELNVNLVKRAGGSISDSISINSATLDASGIDQSVRANSSKTDLERLFNSPAVHELKEQICDVGRRLWQRAYVDGNGGNLSIRLTEDVVLCTPTLVSKGFMKPEDLCLVDLDGNQLAGVKKRTSEILMHLSIMKAQPKARAVSHAHPPYATGFAVAGVQPPTCMIPEIEVFIGRVPIAPYETPGTPEMGLKVAELVDQHNTVLMENHGVVSWSNTIEDAYFKMEIVEAYCRTVLVTTQLGVKPKQFSPKHLQDLLEIKQKLGVPDPRIGLKECELCDNDEWRPGVTCEVPNKGAGSGVESTDPEAETVVQAVTDEILARLKG

>CMO57_03025
MRLGKVIGRVTFSQSIPAFEGGRWLIVNPYTCDQFQSGDNPPESITAEPSLVVYDSLGGDLGQTVGFIEGREAASPFPERTPIDAINVALVDSVYHKPKN

>CMO57_03030
MRLARVEGNVVATRKHSSLDGWRMVVCQPINLEGENDGTPIIAIDPYGAGMHQRVVVTSDGAAARSVVGDNRSPVRMMITGIIDRMEEEKQHEIG

>CMO57_03035
MANAVNEALIRDVIQDVLGRLGGESSLPDVKNDNGSCGCSGNSSSGRDFGVFQNANDACGAASEAFLQLRKQGVDARRKIIEVVKELCEANADEWGRIELEESKIGRLDHKIEKLHIIRDVPGVEWLSPDGRSGDNGITLEEYTPFGVVGAVTPSTHSIPTLAGNIVNIVAAGNAVVFNAHPAAARCAAMAVRKFNEAIHRSIGIENIACIIEKPSFDSFKEMCANENVRLLCVTGGPGVVAAAMQTGKRAICAGPGNPPVFVDNTADIDRAARCVVQGASYDNNLLCIGEKQVFVLDSIADDFMRAMERHAAVRLNNSQLDALTQAAFIFPEGQGAGCGHAATNKDFIGKDVSVLAQAAGVNISPGSQLLFAETNADHLFVQEEQMMPMIPIVRVSSVEEGINAAKKSEHNYRHTAIIHSHDVNNMTAMGRALDTTLFVKNGPSMAGLGLGGEGYLSFSIATPTGEGVTNPRTFTRVRRCVMVDNLRIY

>CMO57_03040
MFLARVEGSVVATKKDEALSGRKLLLVRPQLVDENNPAQFRPGKNTIIAVDSVGAGEGELIMFTQGSSARLAPNMKSAPVDAVVVGIVDTVDVLGHIIFDAKKHDHS

>CMO57_03045
MSQQAIGLIETRGLVALVEGTDAMLKAANVELSGPMQQVGNALVSACVTGDVAAVKAATDAGAEAVKAIGGEIVSVHVIARPHGDVGTVLPKTKK

>CMO57_03050
MKILIANLGSTSVKYRLFDFSSGEGVLLVKGGIERVNDHATAIEQVQSELKEGGWITSQADLTAIGFKTIMAEGITGCLELTEEVVESMEMCNYVAPAHNPPYIKGIRLFANKMPETPLVGLFETAFYQWMPESSTRYAVPKSWHEAGVRRWGFHGASHKFIAERSAELLGREDVADRARNLYIDDAGTKVQGPPFRVISCHLGGSSSITGIKDGTAIGNSMGLSPQSGLPHNNRVGDLDSMAVLHMMRRNNLSVDQVEQALCSDSGLKGLSGGHNDIRDIQTAADRGDTNSRLALDVFVNSARHWIGAYFAQLNGIDALVFTAGIGENRAAIRAEICANMDQLGIQLDSSKNASIEAEEAIISREDSAVKVLVIPTNEELVVAREVKRFLDNKKN

>CMO57_03055
MAEQAIGMIECKGFCALMEASDAALKAANVTMTGWDKVGSGLVTGFYRGDVAAVKAATDAGAAAAADVGEVISVQVIPRPHEDLKGLGEWLT

>CMO57_03060
MSEALGMIETKGYVGSVEASDAMVKAANVSLVKTVPIGGGLITVLAKGDVGSIKAAVDAGTNAAARVGELVSSHVIARPHEELLKAFSASPGKANK

>CMO57_03065
MEVQPNKVHRAVVEHLVRQAVYQRMGKSVPSTGQAPNPLVVNVSARHCHLTQEAVESLFGKNHQLTPMKWLYQDGQFAAKETVTLVGPRSRVISNLRILGPCRTLNQVELAYTDAIALGFDIPLRQSGKIEGTPGGMLMGPEGFFEMPDGIIRAERHVHMNPEDAAFYSVSAGDRMKLKVGGACSVTFDEMLVRVDNSFKLEVHIDTDEGNSVNLKPDTPCELVK

>CMO57_03070
MQAEERQFLIEQHLQKVEFASLEELSEKVDVSISTVRRDLTLLETRGTIRRTHGGARLIAPKSDEFTFSARDTHQLTEKDAIGRTAASLIKPNQGVIIDAGTTAYHAAKHLGGKASHIITNSLPVANHFGSDNSVEVLVTGGVIYPRLGVLVGPLAVESLSMMHADIAIMSGGGITLDGVTNSHALLIDIQRAMLKSAQHIIFCLDHTKFNRRSVSHLCEIKAIDTIVTDNQAPELLIEQLQKSDMKIMIAD

>CMO57_03075
MPYLAKNYETSVYLQYVLMKNLLLVSVVCLWVTALFIKVFDFKEEYENTNQTEETITDKPLENLKDGEFTEENFKPLE

>CMO57_03080
MSSNIFRGCIPALMTPCDIDGNPNYDALVGTANRLVKAGMSGVVYCGSMGDWPLLTDEQRQEGVSRLVKAGVPVVVGTGAQSPSQAVSHATHAREIGAAGLMIIPRVLSRGISRLAQRTHFADILKSAGDLPAVIYNSPYYGFETKADLFFELNREFSNLIGFKEFGGADSLTYAAENIINQDPSLILMVGVDTQVFHGYVRCGASGAITGVGNALPSEVLRLVELCELAAVGDVEARRLAKELEDALSVLSKFDEGPDLVLYYKELMVLEGYLEFTHQINSSDRLSESQRQYLHGQWRQFKNWWDKWEGNPKNVKEKT

>CMO57_03085
MSSHFFPRAKRVISLFMSGGPSHVDTFDPKPLLTKLDGQPMPAEMIKNHEFAMIKTKEPKVKGSPWKFRKNGQSGTEISEMFPHIASVADELAVVRSLYSDTFNHDPAVTFMNTGNVRFGSPSLGAWASYGLGSENSDLPAYIVLASGRNIQPLLDSYWGAGFLPPEYQGVQLRTQGDPVLYLKNPEGVSRETRLDQINLLGSLNRYRHELVNDPAILARIKQYELAFRMQVAVPELVDIDSEPIHIRESYGAESGKVSFANNCLLARRLSESGVRFVQLYEKGWDSHGDISTQHPERCRAVDRPIAALISDLKQRGLLDETLVVWGGEFGRTPMAQGSGTSFGRDHHPHGFTVWLAGGGIRPGIVHGATDEFGYFAEQNKVHVHDLNATILHCLGMNHEKFTYRHQGRDFRLTDVHGQVVQNLLI

>CMO57_03090
MNLLHYKIVLQLFVSLVFLNTVKGVSTVSVGVSKVDVTPSMPVLLAGYGGRTTEHEGVDTLLWARALVIGDSNPVAIVALDNCGVSQLVTDRLA

>CMO57_03095
MYCGNCFRDNALVTEFRRMGHDALMVPLYLPLTLDEEDQSKGTPIFFGGLNVYLSQKFKLFRKAPNWLRXIFNAXIIXRSIGKIAGKTRGKDVGALTLSMIRGXEGNQLKELEELITWIKEGDKPDIICLSNALLIGMSRRLREALSIPVICLLEGEXTFLDSLPSPEREKSWAEIQRRVVDVSLFIAPSRYYSXVMAERXAIPSEQLVQIYNGINLEGYNTSPLPDAPPVLGYFARLCPXKGLDSLIDAYIXVRXSGRVPNLKLAIGGGYQPMDKAFVEEQKNKLQKAXLLXEVKFEVXXDRXRKLEFXSQLTXLSVPALYGXAFGLYVVEAMASGVPIVALNDAXFPEMVEETGAGLICKKNSKENLAXTIEQLLXNPEQLIKHSKAGRTAAANTFXIQKMAXSYIKQXTNLVXVFTAFRFTATALQXGPVKRPLSQSIALFVAFAAAILNGCKPSTLENSSMLNETKPALQETNVVNELDPQIQAKTKEHKYTNRLANEPSPYLEQHKHNPVDWYPWGEEAFKKAKDEDKPILLSIGYSTCHWCHVMERESFEDETTAKVMNENFVCIKLDREERPDVDKIYMTFVQATTGGGGWPLNVWLTPELKPFYGGTYYPPVAKFGRASFTDVLTQLADAWKNQRKDIVDSANDISQKIAESISLKAKENIKLNPIWLDQAVEKFKSEYDPRYGGFGTAPKFPRPSQPLMLLRQAYRIGDQDAINMVLNTCDKMAAGGMYDQIGGGFARYSVDEKWLVPHFEKMLYDNAQLLHLYLDAYLISSDKKYAAIAHDILRYILRDMRHKDGGFYSAEDADSEGKEGKFYCWTETELKTLLSESEFTLTKRYFGITANGNFEDHSDPDPLKNQNVLSIVDANLTEDDLKTLNSAKQKIFKERTKRVRPHLDDKILSSWNGLMLGAISRASVILNENKYLEAAEANLSFLQTKLWDSKSKTLYHRWRNGERDNVQLLDAYAFLIDGVLHLYEVTLDPKHLQFAIDLTDGMKTRFYDESNGGFWQSTDTPHLILQVKEDYDGAIPSGNSVAALGLLRLGKITDNNEYIKMAEKTLTLFSDNLNNNPQXVPXLLQALDYIIHEPRRAVITGDPESSGAQDLITAAHSIYXPNKVILGVAGPVEDFAKKLPVGKQSEVYLCTGSACQEPTVNSTKLKEMLAAKTLP

>CMO57_03100
MRCIVTAGPTYEPIDQVRRLTNHSTGSLGTGLAKRLASDGHEVILLRGIMATCTEEIESLDTRIFTTTDDLAEKLKKLAEEFPDTFAXFHAAAVSDFCAXSVFQRKSDDKLIPLKNGKLSTRDGKLLLELCPTQKIISQLRSWYKKAQIFGWKYEVDGNRLTTFEKAQKQIEENKTNACIINGSAYGNGFGLLKKGSETLNHLDNTKMLYDALASLIKST

>CMO57_03105
MPYKIIGSDLQEYSPVELEEVREWITEGRADSNTLVCEIGEKQWVRLRDSSEFAADLSKDQGRQEGQSGGVIHINYLVPAILCTIFCCLPFGIAGILFAAQANSKTQQGDYDGANIAASRAKQMCILSFVFGVLTIIYYFSSGEFQRLMEALQEVSQR

>CMO57_03110
MGLFDIIGGKNPERGESGHFGDYDLQEVVNSGGMADIWLAIDPDKHPVAVRRLHAELRKDSKAKKRFVSGCEILEKVCKHPYIVEYLGHGKIKGDLYLTMEYCEFPNLKILISRADPVLEKYVGNILIDAAEALEHVHDCGYLHYDFKPENILVSRNGNVRLCDFDLSRPVPEIPTKMPDNPGTPVYMAPEQLRGREIDQRADIFAFGVTMYETLTGQKPFNGNTSKEVLMQQKDRSQFFANPRDLNPSIPINVEKIILKCIEFEVNNRYPHITYLVADLRKALYV

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021