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BMC type: PVM


Organism: Opitutae bacterium TMED102. Bacteria; Verrucomicrobia; Opitutae.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

        CBC62_03065 (fasta)
              CBC62_03070 (fasta)
                  CBC62_03075 (fasta)
                      CBC62_03080 (fasta)
                            CBC62_03085 (fasta)
                              CBC62_03090 (fasta)
                                         CBC62_03095 (fasta)
                                                CBC62_03100 (fasta) HMMreg08220_2_PVM PVM (details)
                                                      CBC62_03105 (fasta) HMMptac_2_mix PVM (details)
                                                        CBC62_03110 (fasta) H_purplishGrey PVM (details)
                                                          CBC62_03115 (fasta) H_vividBlue PVM (details)
                                                                      CBC62_03120 (fasta) HMMacetkin_1 PVM (details)
                                                                        CBC62_03125 (fasta) H_blurple PVM (details)
                                                                           CBC62_03130 (fasta) P_dirtyPink PVM (details)
                                                                                         CBC62_03135 (fasta) HMMalddh_1_eutpdugrm PVM (details)
                                                                                           CBC62_03140 (fasta) P_slate PVM (details)
                                                                                              CBC62_03145 (fasta) P_adobe PVM (details)
                                                                                                        CBC62_03150 (fasta) HMMaldol_4_pvm2 PVM (details)
                                                                                                                    CBC62_03155 (fasta) HMMnopfamclust22_1_pvm PVM (details)
                                                                                                                         CBC62_03160 (fasta)
                                                                                                                           CBC62_03165 (fasta)
                                                                                                                                    CBC62_03170 (fasta)
                                                                                                                                          CBC62_03175 (fasta)
                                                                                                                                                CBC62_03180 (fasta)
                                                                                                                                                     CBC62_03185 (fasta)
                                                                                                                                                         CBC62_03190 (fasta)
                                                                                                                                                           CBC62_03195 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_purplishGrey
       H_vividBlue
       H_blurple

BMC-P(map on tree)

       P_dirtyPink
       P_adobe
       P_slate

(complete list of loci)

Protein sequences:

>CBC62_03065
MTIETANAVAVPGLLNTLTWVWLFXALPTAVCLWFINAPYGRHNPGNWGPSVSARVGWLLMESPSXVIPLGXFVYVRGWXSTXITVFFLLWQAHYXXRAWVYPFRLAXTSSPMPVALACFGGLFNTINCSLHGAWLIAXHDSXALDWAAPHFLAGIVLFIFGMGVNIDACTXLIRLKKAKPDGYSVPXGGLFRWISCPNYLGEIIEWFGWALLTWSLPGLTFAVWTXANLGPRARAHHXWYREQFXDYPPKRKALLPRLF

>CBC62_03070
MPSKFDESDFVDRDLEAAHESAAPPPEPEPLPEETSPPPSPEELTERVSETQHKLAELKQMQDELERERTEIEEARKRRSELSTGREEMVQHLTRGIGLLEEAELSSGRTAEQLSRTVADLRTSLDKINLINEEEWTEENWSVELTKALTTIENSRMEWNGARIKWPLLDGETDLAPSVAATTQPLQTTERAGLAQLSFWQLSKLGLAFTWPLVLVGLAVVILLVLSRS

>CBC62_03075
MGLFRKNKDPLENRAKSVQEKLTDLQSQIEELGAPSKPFAAQPAPAVHDLNTDPNPLPRRSAEAVSAKPLDTLAQRPEKLWDRITKNFRKPPVSNNPKLVNFLAAGSIQGLRPLRYERRVARNRFLAFTTILVLVLIGLFWTLIQQ

>CBC62_03080
MTNSPIGISTPHGIFVTTYSQAGLCRLEFPGKTQPPKTQPNLTGLAKRWHRATVQTLETILLGKAPRALPPLDLSAGTKFQISVWQQLLQIPLGQARSYGELAKRLGKLGASRAVGSACGANPIPVIVPCHRVLATHGRIGGFSGCPGWKQRLLKIENTLFIE

>CBC62_03085
MSKDTTMKRTLLYLLAALVATGTNSIAQSPTAVEGHDAFIKSLQELKRKASKELGGKSASRPRTLSPVVSRFKGWFIDITVKAKPGKLDGADVIEGISLASQSRDTSAWQFVETKKGYLVRAAAGKYKGWYIVSDDRAKPRPEGPNLTVAPALRLAKSATKNAHWKLTLAKMGLVLEATSGKYKGWYWDFGGNDPSHKESGREVAVNVLLAEKVVAGSYFAVKPVK

>CBC62_03090
MLLTVFYFKFGRALLKARASGLPIKFMDLLELKLRKIPANVIFDTQIKAADNGVEVSTHELAIHFLARGNV

>CBC62_03095
MYKQITKIEELNLRALSELSAKHRAFLSVFFNGRKEWEDHKNNIKKIEILLKEHPXELEHFRMNIKMLEETLDXNIKDENFNIAAFCCWAMDYCEVYSLPFKTSYNLLXVXSSPXIRPLAELNDEYESCAIVISDNTATKIFMLSSEKSNDLIKSIKGNIKNNVKVGGWSQKRYSRRRDKQIHHYVKGICEELVRLDHETDFNRIVFLGSEEILRSIKSALPSSITTTKELIDKIIDLGRSENEIQAEIDDLIGELEIAEEXNLWGKIKNELFSGGLGVTGLSEVIDYAESGRLDSVIVEKAMNVSGARCRKCDHLQINLTXCDKCNSADLYEVGLVXELVELLTQSSASIEFCDHIEELHQLXXXAGLLRY

>CBC62_03100
MQAEERQFXIEQYLQKVEFASLEELSEKVDVSVSTVRRDLTLLEAKGAIRRTHGGARLVTPKSDEFAFSARDTHXLTEKDAIGQAAAALVQPNQGVIVDAGTTAYHAAKHLGGKVSHLITNSLPVANHFGSDNSVEVLVTGGMIYPRLGVLVGPLAVESLSKMHADVAIMSGGGITLDGITNSHALLIDIQRAMLQSAQRIIFCLDHTKFKRRSVSPLCELDAIDAIVTDAQAPADLVEQLKQTNTQVVIAD

>CBC62_03105
MAVQPNPVNRAVVEHLVRQAVYQRMGKPVPSTGQAPNPLVVNVSARHCHLTQEAVEALFGKGHQLTPMKWLYQEGQFAAKETVTLVGPRSRVISNLRILGPCRRLNQVELAYTDAIALGFDILLRQSGKIEETPGGMLMGPAGFFEMPDGIIRAERHVHMHPEDAAFYAVSAGGRMKLKIGGPCAVTFDEMLVRVDESFKLEVHIDTDEGNAVNLKPDTPCELVK

>CBC62_03110
MSEALGMIETKGYVGXVEASDAMVKAANVNXVKTVPIGGGFITVLAKGDVGSIKAAVDAGTNAAARVGELVSSHVIARPHEDLLKAFNNPAGKANK

>CBC62_03115
MAEQAIGMIECKGFCALMEASDAALKAANVTMTGWDKVGSGLVTGFYRGDVAAVKAATDAGAAAAADVGEVISVQVIPRPHEDLKGLGAWLE

>CBC62_03120
MKILIANLGSTSMKYRLFDFXSGAGEMLARGGXEXVTDHAEAIEQVLTELKEGGWIASEADLAAVGFKTXMAEGRTGCLELTAEVVDSMEDCNYVAPAHNPPYIRGIRLFAEKMPAVPLVGLFETAFYQWAPEASNRYGVPKSWYEAGVRRWGFHGASHKYIAERSAELLEREDVANRARNLYVDNAGSPVDCPPLRVVSCHLGGSSSITGILNGAAIGNSMGLSPQSGLPHNNRVGDLDSMAVLHMMRRDGLSIDEVENALCSEGGLKGLSGGHNDIRDIQSAADAGDADAQLALDVFVHSARHWIGAYFAQLNGLDALVFTAGIGENRTGTRAAICANVDQLGIRLDPAKNEATQAEEAIISADDSPVKVLVIPTNEELVVAREVKRFLDHKRN

>CBC62_03125
MSQQAIGLIETRGLVALVEGTDAMLKAANVELSGPMQQVGSALVSACVTGDVAAVKAATDAGAEAVKAIGGEIVSVHVIARPHGDVGTILPKTKK

>CBC62_03130
MFLARVEGSVVATKKDDGLSGRKLLLVRPQLVDESDPAKFRPGKNTIVAVDSVGAGEGELVMFTQGSSARLAPNMKSAPVDAVVVGIVDSVDALGQVIYDAKTDDQA

>CBC62_03135
MANAVNEALIRDVIQDVLGRLGGETPNAPAANDDKGSCGCSGKSGGKDFGVFQNADDACDAAAKAFLQLREQGVEARRKIIEIVKGMCEDNADEWGRIELEESKIGRLDHKIEKLHIIRDVPGVEWLRPDGRSGDNGITLEEYTPFGVVGAVTPSTHSIPTLAGNIVNIVAAGNAVVFNAHPAAAKCAAMSVRKFNEAIHRATGIENIACIIEQPTFDSFKEXCANENVRLLCVTGGPGVVAAAMQTGKRAICAGPGNPPVLVDXTADIDRAARCVVQGAAYDNNLLCIGEKQVFVLDSVADAFMSAMERHAAVRLNGSQLDALTQAAFVFPEGQGAGCGHAATNKDFIGKDVPVLAQAAGVNAPAGTQLLFAETSADHLFVEEEQMMPMMPVVRVRSVEEGIEAAKKSEHNYRHTAIIHSHDVNNMTAMGRALDTTLFVKNGPCMAGLGLGGEGYLSFSIATPTGEGVTNPRTFTRVRRCVMVDNLRIY

>CBC62_03140
MRLARVEGNIVATRKHPSLXGWRXVVCQPINLEGEXXGTPIVAIDPYGSGMHQRVIVSSDGLAARKAVGDXRSPVRMMISGIIDRMEEEKTA

>CBC62_03145
MRLGKVIGRVTLSQTIPAFEGARWLVVNPYTRDQFQSGEEPPAXLTPEPSLVVYDALGGDVGQTIGFIEGREAASPFSEPTPIDAINAALVDTVYHQPKN

>CBC62_03150
MKKVYSVXDIDELHRSGGLGSIPXNAVITPSARDRLNELGVERAKRAGGSPARAVSSSAGPVDDRGIDQSVRANSPKADLERLFNSPEVHELKEQICDVGRRLWQRAYVDGNGGNLSIRLTEDVVLCTPTLVSKGFMKSEDLCLVDLEGNQLAGVKKRTSEILMHLSIMKAQPKARAVSHAHPPYATGFAVAGVQPPTCMIPEIEVFIGRVPIAPYETPGTPEMGLKVAELVDKHNTVLMENHGVVSWSNTIEDAYFKMEIVEAYCRTVLVTTQLGVQPKQFSPKHLQDLLEIKQKLGVPDPRIGLKECELCDNDEWRPGVTCAVPAKEGGXGTTSXPEAETVVKAVTDEIXNRLKG

>CBC62_03155
MKSLDAKLAAYRENPAARDSFVIADAKDPDMAFGIRALGHRRYLSGQGAHPAQFSPEIWSRDEFGYRNLPEFLDIIREVVAQGLVDIMLMSAHVNEQLTIKEGLFRXSXITPAARANDATDVWAARHGNYLSHPAQPFRSASIDHIQCGQLDCDRSTDTFPGANLGLYSVTYLNDLEQDKQTLEAFHAFREEAERKRFRYFLEVFDPNVDSGIAPDKLGAFINDQILRTLAGITEAGRPVFLKIVYHGARYMEEICQYDPNMAVGVLGGSAGTTYDAFRLLHXAKKYGARXALFGRKINNAEHQXAFIEFLRLISEDKISPEEAVHAYHGVLQGKGITPXLSLEQDLELTEQSMRYGDEGGKTIXTMPAKRFAKRKSSTSAWPTKSDGAPDFGSMTADQRLAYYTTRLKQ

>CBC62_03160
METQRCAYAILTDRSNRFALVPHPGPNSVYQFRFNAKSGKLTKNEPLTASPVAGLEPRHLAFHPKLPIVYCDDEKGDSVTAYHFDREIGQLKAIHTRSTLPADFDGIQNTCADIEITADGRFVYASNRDHNSIAGFSLDAKSGKLKSIGQFATGSTPRSFNLDPEKPMNGCWDSVRTTCTFTNAIRKKGI

>CBC62_03165
MENACTSPCAVPTVSRRFVLIVPTKKLIPLGLTDIRAKAAYLATDQTGKTLLWASYSGGVVGSHALA

>CBC62_03170
MEKVVIIGSGCAGLTSAIYTARANLEPLVLTGIMPGGLLTTTSIVENFPGFSKGIDGTELMVEMQQQAERFGAKIKFGSTVESVDFSGQPLKLTVDGNEVEAQTVIIASGAGHRHLGLESEAKLEKKGVTYCATCDGALPMFRDQPLVVVGGGDSACEEATYLTRFASKVYLVHRRDELRASKIMAERTMSNEKIEPVWNSEVIEVTDVEQDKVTGVKIRNNQTNQENTLDCAGLFIAIGHVPNTQLFKGVIDMDDAGYILPKRGQETNVTGVYVAGDCSDHVYRQAITAAGQGCAAAIDAERYLASLDQ

>CBC62_03175
MQPRKAQIKRDTGETKIRLSLNIDGKGKSKIATRIPFFDHMLTLFAKHATVDLNLRCNGDIEVDHHHTVEDCGIALGQAFVEALGDKKGVRRYGTGFDPRNPFTGEAYVPMDECLTRCVIDFSNRPHLAWRGLAKHXQKGISEADKTQDMSSIFRFGXAKEFFXAFTNDARCNLHLELLYGDEPHHIVEGLFKAFARATDFACQHDPRIAGQIPSTKGKL

>CBC62_03180
MPSXXDYPTAXEPQLVEWAKGGDXQAFEEXVARXRXRAYVRAYSIMRNEDLAVDLSQNAWVKAWQRLAQFHGDASFATWLNRIVTNLCLDELRRQKRARMDSIEEIEEAXGPVEXRMEIQEVDPMERIXREELRERIDAAMDKLSDNHRTVLVLYEYEQXEYKQIAEKMGTSIGTVMSRLFYARKKMAALLGETLKRDGLIE

>CBC62_03185
MNENEXQLKVQALVDGXLTGRXXEELQQRIDNDAALQTLHARLTQMRGLIADSELPRTLPESGDFYWNKIAESIGREERAATRQPRPISPSRWLMRWFXPLAGVATLVFLLXLQQPTAPDLGISFSSDHELELSDDEIDVMTYNSDDDSMSIVWLDYSMDIQKDYMELWLD

>CBC62_03190
MTLLRKHNLNRLTFLVALLLFAGGGWATEEADSITVNARLVLGTSKEKSGSKKVIESIRKRLAKVFKWMHYYQLSSKKLTIADGKTQTSKLSKKASIKVTKQKDGKISVSLFSGGKMLLQKTQALRSGSYMVLAGKSTGDSAWFIVLSKSN

>CBC62_03195
MAKLLLEYEIKSKLLKSEFNTDDLTREKLXAALKKKEKPEELLDPIGVDEDGDGFGAYDEKLTGHSDQDPNDKPTQEEVDAALQALEP

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021