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BMC type: PVM


Organism: Opitutae bacterium TMED67. Bacteria; Verrucomicrobia; Opitutae.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

                CBC27_08490 (fasta)
                   CBC27_08495 (fasta)
                     CBC27_08500 (fasta)
                      CBC27_08505 (fasta)
                           CBC27_08510 (fasta)
                             CBC27_08515 (fasta)
                                                CBC27_08520 (fasta)
                                                   CBC27_08525 (fasta)
                                                              CBC27_08530 (fasta) HMMnopfamclust22_1_pvm PVM (details)
                                                                       CBC27_08535 (fasta) HMMaldol_4_pvm2 PVM (details)
                                                                         CBC27_08540 (fasta) P_adobe PVM (details)
                                                                           CBC27_08545 (fasta) P_slate PVM (details)
                                                                                        CBC27_08550 (fasta) HMMalddh_1_eutpdugrm PVM (details)
                                                                                          CBC27_08555 (fasta) P_dirtyPink PVM (details)
                                                                                            CBC27_08560 (fasta) H_blurple PVM (details)
                                                                                                      CBC27_08565 (fasta) HMMacetkin_1 PVM (details)
                                                                                                        CBC27_08570 (fasta) H_vividBlue PVM (details)
                                                                                                          CBC27_08575 (fasta) H_purplishGrey PVM (details)
                                                                                                               CBC27_08580 (fasta) HMMptac_2_mix PVM (details)
                                                                                                                      CBC27_08585 (fasta) HMMreg08220_2_PVM PVM (details)
                                                                                                                        CBC27_08590 (fasta)
                                                                                                                                  CBC27_08595 (fasta)
                                                                                                                                      CBC27_08600 (fasta)
                                                                                                                                         CBC27_08605 (fasta)
                                                                                                                                           CBC27_08610 (fasta)
                                                                                                                                                CBC27_08615 (fasta)
                                                                                                                                                     CBC27_08620 (fasta)
                                                                                                                                                             CBC27_08625 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_purplishGrey
       H_vividBlue
       H_blurple

BMC-P(map on tree)

       P_dirtyPink
       P_adobe
       P_slate

(complete list of loci)

Protein sequences:

>CBC27_08490
MLKDYFEVPNKPAIKSGNILSCDFTDHETFIPQPLDYTRGTIATYVDCNGFIKMSGVSDTNLVTNGTFETPVDSNQWLNFGSPLIAERSQTVAYEGSFSYHIKGDSTNDGTQATATQFTGDYVIGDTIRVRAYIYPITASSNQIKSGVANSNRSITTAVGGLVLNQWNFIEYYAEITTASNNYVTFLISGTAGEFYLDNVSVNKVDVETPRIDYLTEIGKAKELQKPSLLLEPQRTNLAIYSQDILQWPAFEGTRTANTAISPENIQNAGSFVENTANSRHRLNTNYISYTSGSTYTFTLFAKIKSGSRLLCINANSAFNARAYFNLVDGSIAGTDSGTANIEAYPNDWYRCSVTGTATSTSSMTTFFGLEDSPSDNGYQGDGTSGHFYYGLQIEQGSYPTSLIHTSGSAVTRNQDLANNAGQLGVFNDTEGVLYAEMASLANDGTQRKLAISDGTNQNVVVLQFTNVTNQLRAFLYNGALNVNMYNVLSNALEFNKIAFKFKENDFSLYVNGSEVATDPSGTTFSTGDLTKFNFNDGGISDPFHARIREIKVFRRALTDSELTELTNNIV

>CBC27_08495
MDLKIYKTNFADEAVGKAALVAAGVWAEVTEEGVTQMVYTNGTRAVVNIGKVVEIPGTYGPDGHEITPPVYYPGWCYDIMSSDTLDFGTNEVYPTAPAHGFLGWPITAEVEPTPPEEEEE

>CBC27_08500
MEVKKITDHQLKKVTEQQQQLNNVLSNIGVLEVQKQNLAQQVKDISEEIEKTKSELEEEYGKVNINLSDGTYEEIEEKEDA

>CBC27_08505
MHNIRKISIGSDYKNDAMHYAVGQQVYGGHEISHILFETSDSSYNIYIKKNDEVLPWXKFNSNMSISVEYDLEY

>CBC27_08510
MKSLYDFIVKPVGDKYNNEIQVDGKKLVVNTKIESWKFVNRLAEVIETPAAFKTXIKKGXTLVIHQNVFRTFYDMKGKKKQSRSFFKEDLYFVSLDQIYLYNNNDGWHSFGDRCFIQPIKDKSSLTTDKEXKLKGILKYGNSSLEALEIHQGXXVGYTPNGEWEFLVDKERLYCMKSNDIVIKYEHQGXEEKYNPSWASSGQGINQGC

>CBC27_08515
MNTKXTKKNIIQAGQVAVKELIKVAKEPIVDSDDDISADRLKNAAATKKLAIFDAFEILXRIEEEKNMLEDKPKENKKQXNFKGFAEGRSX

>CBC27_08520
MYXQNLYTILDDYITPKTIKKYNRLKKWXYGXNEQHDMVVISKXGTXGDIXEIQNLKIALPKAKNIHKFEDNKWSKTEYPKPLSKIKTVFDWKQYPQDFKEKWYDYIDNEFTRREEGFWFYNKDVSTYLTGTHYMYLQWSKIDVGAPDFRESNRLFFIFWEACKADTRSYGMCYLKNRRSGFSFMASGEVVNLATISSDSRYGILSKSGPDAXKMFTDKVVPISVNYPFFFKPTQDGMDRPKTELAYRVPASKFTRRKLTXXAADDEALQDLKGXDTTIDWKNTGDNXXDGEKLKLLVHDESGKWEKPNNILNNWRVTKTTLRLGSRVIGKCMMGSTSNALDKGGRNFKKLYDDSXVTKRNSNGQTRSGLYSLFIPMEWNYEGYIDSYGIPVFDTPKKFAKGPDGGKINLGVIEYWNNEVEGLKDDQDGLNEFYRQFPRTTKHAFRDESKQSLFNLTKIYEQIDFNEDLKNSIGVTKGSFQWENSEQDTKVIFIPNKQGRFLITWIPDVQVQNRRYIKNGVNYPGNEHMGAFGCDPYDISGTVDKRGSNGSLHGLTKFSMENAPPNHFFLEYIARPQTAEIFFEDVLMACVFYGMPILAENNKPRLLYYFKRRGYRGYAMNRPDKKRNKLSVTEREIGGIPNSSEDIKQAHAAAIETYVEHYVGLKETGYGDMYFQRTLEDWAKFNINNRTTHDASISSGLALMACNKHRYAPNVKRIIKPVDLGIKRYNNKGTTSKIIS

>CBC27_08525
MNIYSNTNSPFPSQVVSDVEKASLEYGTQVAQAIEQEWFSQGRTSGNRYLTNWNNFHQLRLYARGEQSIQKYKDELAINGDLSYLNLDWKPVPILSKFVDIVVNGISSKTYDIKAYAQDPSSIKKRTEYASKIYEDM

>CBC27_08530
MKSLDSKLAAYRENPAARDSFIIADAKDPDMAFGIPALGKRRYLSKLGSHPAQFSPEIWTRDEFGHRNLPEFLDIIREVVAQGLVDIMLMSAHVNEQLTIKEGLFSNSHITPAARANDATDVWAVRHGNYLSQPAQPFRSASIDHIQCGQLDCDRSTDEFPGANLGLYSVTYLNDLEKDKRTIEMFHEFRKEAERKKFRYFLEVFDPNTDSGIPENKLGEFINDQILRTLAGITEVGRPVFLKIVYHGPRYMEEICQYDSNMAVGVLGGSAGTTYDAFRLLHDAKKYGARLALFGRKINNAEHQLAFIEFLRLISEDKILPEEAVHAYHGVLQGKGIIPNRTLEKDLELTEQSMRYGDDGCKTIINITKNPIAKQSRSDTKSQSAANSAWPKDVNGRPDFASMTADQRLAYHTGRLSL

>CBC27_08535
MKKVYSVKDIEELHRGGGLESIPSNAVITPSARDRLNELDVKLVKRSGGHVSATTSKNNGALDENGIDQSVRANSSKTDIERLFNSPAVHELKEQICDVGRRLWQRAYVDGNGGNLSIRLTEDVVLCTPTLVSKGFMKPEDLCLVDLEGNQLAGIKNRTSEILMHLSIMKAQPKARAVSHAHPPYATGFAVAGVQPPTCMIPEIEVFIGRVPIAPYETPGTPEMGLKVAELVDQHNTVLMENHGVVSWSNTIEDAYFKMEIVEAYCRTVLVTTQLGVKPKQFSPKHLKDLLDIKQKLGVPDPRIGLKECELCDNNEWRPGVTCEVPNQSVGNANQATDPEAETVVKAVTDEILNRLKG

>CBC27_08540
MRLGKVIGRVTFSQSISAFEGGRWLIVNPYTRDQFQSGDNPPMGITAEPSLVVYDALGGDVGQTIGFIEGREAASPFTERTPIDAINVALVDSVNHQPKK

>CBC27_08545
MRLARVEGNVVATRKHSSLDGWRMVVCQPIDLEGENDGTPIIAIDPYGAGMHQRVVVTSDGAAARNVVGDKRSPVRMMITGIIDRMEEEKRA

>CBC27_08550
MANAVNEALIKDVIQDVLGRLGGDSSIQDVKSDNGSCGCSGKGXSSKDFGVFKNANDACEAAAEAFIQLRNQGIGARRKIIEIVKGMCETNADDWGRIELEESKIGRLDHKIEKLHIIRDVPGVEWLRPEGRSGDNGITLEEYTPFGVVGAVTPSTHSIPTLAGNIVNIVAAGNAVVFNAHPAAAQCAAMAVRKFNEAIYRSIGIENIACIIEQPTFDSFKEMCGNENVRLLCVTGGPGVVAAAMKTGKRAICAGPGNPPVLVDNTADIDRAARCVVQGASYXNNLLCIGEKQIFVLDSIADDFMGAMERHAAVRLNNSQLDALTQAAFVFPEGKGAGCGHAATNKDFIGKDVSVLAQAAGVNVSSGTQLLFAETRPDHLFVEEEQMMPMLPIVRVRTIDEGIAAAKKSEHNYRHTAIIHSHDVNNMTAMGRALDTTLFVKNGPSMAGLGLGGEGYLSFSIATPTGEGVTNPRTFTRVRRCVMVDNLRIY

>CBC27_08555
MFLARVEGSVVATKKDEALSGRKLLLVRPQLVDESDPAKFRPGKNTIIAVDSVGAGEGELIMFTQGSSARLAPNMKSAPVDAVVVGIVDTVDVLGQIIFDAKKDDHI

>CBC27_08560
MSQQAIGLIETRGLVALVEGTDAMLKSANVELSGPMQQVGNALVSACVTGDVAAVKAATDAGAEAVKAXGGEVVSVHVIARPHSDVATVLPKTKK

>CBC27_08565
MKILIANLGSTSMKYRLFDFSSGEGELLVKGDIERVNDHSVAIEQVQSELKDGGWITSETDLNAVGFKTIMAEGLTGCLELTEQVVESMEKCNYVAPAHNPPYISGIRLFAEKMPETPLVGLFETAFYQWMPESSRRYAVPKSWYDAGVRRWGFHGASHKFIAERSAEILGREDVASRARNLYVDEAGTQVDGSMFRVVSCHLGGSSSVTGILNGAAIGNSMGLSPQSGLPHNNRVGDLDSMAVLHMMRRDGLSVDEVEHALCNESGLKGLSGKYNDIRDIQSAADSGDANARLALEVFVKSVRHWIGAYMAQLNGLDALVFTAGIGENRAEIRAEICANMDQIGIELDPSKNGSIKAEEAIISSENSTVKVLVIPTNEELVVAREVKRFLENKQN

>CBC27_08570
MAEQAIGMIECKGFCALMEASDAALKAANVTMTGWDKVGSGLVTGFYRGDVAAVKAATDAGAAAAADVGEVISVQVIPRPHEDLKGLGDWLX

>CBC27_08575
MSEALGMIETKGYVGSVEASDAMVKAANVSLVKTVPIGGGLITVLAKGDVGSIKAAVDAGTNAAARVGELVSSHVIARPHEELLKAFSTAPGKANK

>CBC27_08580
MESQSNKVHRAVVEHLVRQAVYQRMGKSVPATGQAPNPLVVNVSARHCHLTQEAVESLFGKDHQLTPMKWLYQDGQFAAKETVTLVGPRSRVISNLRILGPCRTLNQVELAYTDAIALGFDIPLCQSGKIEGTPGGMLMGPEGFFEMPEGIIRAERHVHMNSDDAAFYSVSAGDRMKLKVGGPCAVTFDEMLVRVDDSFKLEVHIDTDEGNSVNLXPDTPCELVK

>CBC27_08585
MIVSQQKTCKIYQFLPNYLLMQAEERQFLIEQHLQKVEFASLEELSEKVDVSISTVRRDLTLLETKGTIRRTHGGARLITPKSDEFTFSARDTHQLTEKDLIGHAAASLIKPNQGVIIDAGTTAYHVAKHLGGKASHIITNSLPVANHFGSDNSVEVLVTGGVIYPRLGVLVGPLAVESLSMMHADIAIMSGGGITLDGVTNSHALLIDIQRAMLKSAQHIIFCLDHTKFSRRSVSHLCEISAIDTVVTDKQSPKVLVEQLKQSNTKVVIAE

>CBC27_08590
FVGGLGVTGVNDIIDYAESGRLDSVIIQKTLNISGVRCRKCNHLQIQSNNCEKCNSDNLYNVGIVNELVELLTQSSAEIEFCEQIAELKELGGIAGLLRY

>CBC27_08595
MSGLVSKAILALEDGTVFKGQAFGATESVAGEVCFNTSMTGYQEILTDPSYKGQIVTMTYPLIGNYGVNDQDIESYQSHTSGFVIRELSPVVSNYRSDCSLNEYMVKNNIPGIQGIDTRALTKKLRVRGSMNGYLTTEQDVSEEEALEKARDWPGLIGIDFVKEVSHKSAFEWDQQDQVSAAFRLPHGPTELDGRIQRKDLPAAEIPIVAYDFGVKYNILRMLRQQGFKVIVLPANTPAEEALRYNPAGIFLSNGPGDPSAVSYAAQAVAELIQKGLPIFGICLGHQILSLAMGGKTSKLKFGHRGANHPVKDLDSGRVEITSQNHGFTVDADSLPSEVTVNRINLNDQTVEGLRHKNKPVYCVQYHPEASPGPHDSSNMFNEFRQLVEKHA

>CBC27_08600
MAKTNVILIKNVEGLGAESDQVNVATGFARNYLLPQGLAIPLTQGNERHLAALRKQRQERELLEAKDAKELAAGFKHLMLIIKAKTGDNGKMYGSVTASNIVDQLKQQFDVKIERKKLHIEEPIRTIGDHNVEIRLHSDVSTTLKVRVESSNPLPESTANDAKEEEVKDSAA

>CBC27_08605
MASFNKVILMGNLTRDPELRYTPKGTAVAKLGLAVNRSWRNAEGQQQDETTFVDVDAFGKQAETLGQYMQKGRPILIEGRLKLDQWEDKNTGQNRSKLGVILEKFSFVGGGQNSGNTPPSQATAPPPTSEVPPFEDGPSDDDVPF

>CBC27_08610
MTKYEGTIILRETGRENTVEELQSLITAEIESSGGKAGEFNSDGLKEFSRVANRKNPNGYYLEVGFESGPNNTGELKKRLLKIKDIFRVLIIKQD

>CBC27_08615
MEKSFLIVGLGNPGKEYANTRHNIGFMILEQLAKHFRFEWQENKKFSTHLAKGDQDEKNILLTKPQSYMNLSGKTVATLAGYHKIHSERIMVVVDDLDLPLGSIRMRPNGGNGGHRGLKSIIEDLGTKSFPRLRVGIGRPDLKQKISGFVLSKFKQDEIDQVEKMIMIASKQLICWINQNIQTAMNNYNGDYSPKK

>CBC27_08620
MKAISLAANERELVKSTGSKKLRNSGLLPGVLYGIGDPKNIELESIQFEKAIKETEAKNFLVELEINGSKSMALVQDLQKDPISRLCIHVDFRRLSDESVITAQIPLNTSGTPEGVKVGGILQTMSHNLTLRGKAVXXPETIEIDTSHLKVGEAILLNELTLPXGVTAVGKPQGRVVAVAASRITAKADESDDKDSSAEENKAEVKKED

>CBC27_08625
MKIFAGNSNRPLADSICTTIGIEPGKIMLKAFPDGETFAKIEENVRGEDVFVVQSSCPPTNHHLMELFIIIDALKRASADRITAVMPFYGYARQDRKDQPRVPISAKLVANLLVAAGANRILTMDLHAQQIQGFFDIPVDHLYASPVIFDYLKYSKHNDLVVVSPDVGGLKMAHAYSEMLNADLAIVAKRRTSATNTESIGIIGDIKGKRALLVDDITETAGTLVNAAAILKEKGAESVRACVSHAILNDLGIDRLKNSCIDELITTDTVPRPEIEGLNVNTLSVANLLGEAIQRIHNNSSVNSLFRFKGARTT

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021