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BMC type: PVM


Organism: Verrucomicrobia bacterium. Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

     C5B50_01710 (fasta)
       C5B50_01715 (fasta)
        C5B50_01720 (fasta)
             C5B50_01725 (fasta)
              C5B50_01730 (fasta)
               C5B50_01735 (fasta)
                            C5B50_01740 (fasta)
                               C5B50_01745 (fasta)
                                                C5B50_01750 (fasta)
                                                       C5B50_01755 (fasta)
                                                        C5B50_01760 (fasta) H_purplishGrey PVM (details)
                                                         C5B50_01765 (fasta) H_vividBlue PVM (details)
                                                                   C5B50_01770 (fasta) HMMacetkin_1 PVM (details)
                                                                     C5B50_01775 (fasta) H_blurple PVM (details)
                                                                       C5B50_01780 (fasta) P_dirtyPink PVM (details)
                                                                                 C5B50_01785 (fasta) HMMalddh_1_eutpdugrm PVM (details)
                                                                                  C5B50_01790 (fasta)
                                                                                   C5B50_01795 (fasta) P_slate PVM (details)
                                                                                     C5B50_01800 (fasta) P_adobe PVM (details)
                                                                                            C5B50_01805 (fasta) HMMaldol_4_pvm2 PVM (details)
                                                                                              C5B50_01810 (fasta)
                                                                                                      C5B50_01815 (fasta) HMMnopfamclust22_1_pvm PVM (details)
                                                                                                         C5B50_01820 (fasta)
                                                                                                                   C5B50_01825 (fasta)
                                                                                                                    C5B50_01830 (fasta)
                                                                                                                      C5B50_01835 (fasta)
                                                                                                                                       C5B50_01840 (fasta)
                                                                                                                                                  C5B50_01845 (fasta)
                                                                                                                                                            C5B50_01850 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_purplishGrey
       H_vividBlue
       H_blurple

BMC-P(map on tree)

       P_dirtyPink
       P_adobe
       P_slate

(complete list of loci)

Protein sequences:

>C5B50_01710
MGQKTNPVGLRIAVNRDWRSKWYAEKKEFGKLLTEDRDIRELLKKKLESASVPQIRIERAANRCRITIHTARPGIVIGRKGAEIDKLKEELSKMTGKEIYVDIVEIKQPEIDAQLVAENVALQLERRVSFRRAMKKALQTAKDFGAEGIKIRCAGRLGGAELARVEQYHWGRVPLHTLRADIDYGFAEANTVYGKLGIKCWVCKGETKPQKAQPQTETVTA

>C5B50_01715
MEVQAITKNVRMSAQKMREVVRQIQGLPAAHAEAVLKVVPRKGARLVAKTLKSAIANAEDLKTHKAEYRGLNTDLLYVKEAFAQTASTLKRFTPKARGSAGPILKRNCHIKIVLSDDER

>C5B50_01720
MGRSIKKGPFVDGHLLEKIQKAKDSKSKTPIKTWSRRSMITPDFVGLTFSVHNGKIFNPVFVTENMVGHRLGEFSPTRIFKKHGAHTAKAEAK

>C5B50_01725
MPVKTFRPLTPSTRYIAYADYSDITKARPEKGLVETRKRTGGRNAYGRVTARGIGGGNKQKIRLVDFQRKKHGVEATVAAIEYDPRRTARLALLEYKDGEKTYIIAPSGLQVGAKLMSGPTAPPELGNSLPLRTVPVGLPIHNIEMVPGRGAQMVRTAGGAATLMSRDEGYAQIRLPSGEIRLVNENCYATIGQVGNTEHENVILGKAGRSRHIGIRPINRGVSRNPVDHPNGGGAGKSKSGGGWQQLTSPWGLLAKGYRTRHRKKFSNRFILVRRDGRPMKNK

>C5B50_01730
MKKARRNNLKDDLKAEYDLTKLKLVGRGKYAEKYKAGTNLILLAPDVVKYFPDPDSVNSALRALIGIAQAHGRTAH

>C5B50_01735
MNFEWDPEKAAANKRKHGISFEEAATVFADPLSATYYDPAHSVGESRYITVGMSRSGRLLFVAHTDRGEIIRIISARLATRRERKQHEEGT

>C5B50_01740
MKKLLPILAAVALSLSGLAQSIEPIYSFISGPTDPRGNLVQGPDGAFYGTSYTGGTGGGYGTVFKATTNGVVTTLVNFNNTNGVGPVGSLAFGPDGNLYGTTSDSTWDGPTGGYGTVFRVTTNGDFTTLVNFGGTNGAYPWAGLTLGRDGNFYGTCLEGGSGTYGTVFRVSINGELTTLVNFDYSNAYPSAGLTLGPDGSFYGTTCGSYALYPWDLGTIFRVTTNGDLTTLASFSSDTGGYPLAALTFGADGTLYGTTSVLGIGGKGYGTVFQATTNGTVTPLVTFESTNGAVPYAGLTLGPDGSFYGTTSGGGSDDWGTVFRVTTNGLLTTLVNFASTNGLDPEAGVTFGSDGNLYGTTSGTFFKMATNGALTTLASLSPNGVNPYASLTLGPNGNFYGTTCNGGSNGWGTVFEVTTNGALTTLGSFDVGGPADPFATLILGPDSAFYGASYDGGNTGNGTIFKVTTGGLITILANFAATNGANPDATLVLAPDGNFYGTTAYGGGTDSGTIFQVTSNGTLTMLVSFNGTNGAFPSGLTPGPDGNFYGITFNGGASGAGTLFQATTNGALRSLINFASTNGANPNGGLTVGPDGSIYGTTAYGGSNGYGTVFRLTTNGALETLANFAYTNGVNPGEV

>C5B50_01745
MTLGPDGNFYGTASGGGSSGNGTVFQVTPSGALTTLASFAGTNGAMPQAGLTLRPDGNLYGTTPGGGASGIGVIYRLNLPPPFGYTPSITISNNGTGNLTLRLASAPGSTNRLWATTNLAVPMPQWEVIATILTDSNGFSVFSDTNTTSLKARYYRLSLP

>C5B50_01750
MKSFLSNFKTIIAILMIVGVPLCFQLCATAAPPTQVETADKLFKTPFNSEAQFIVETITTDLAEQVYFGKNHRLASPGEFSLRTTEKMQPFAEGLYFHLSLSLGTNGPAVESDLAINGPIWAPDVFWEVAKALAKRIGLEARETQKSSQLDLLATLTDGAAGTLEKQNSALSAALEEDFCNAGLHEKAALLIGAFALRDHAGCFSDVRLPLCRMTAHLCMAKVLSDGKTQGNDGRIAKAMLTSLMNNERAALEELNGLDQKEPNVASWSKVLRAFNTGDYRPLEKLPGASRLERQAWFQAYVRSVDTDVAWGRLSPADKRVLDYVRIVEEANFSVETGNEIQELSLPLEINEIASVYNLSQNKKLTSGELTKALNQEPERCFAASGGTAAKVRVIGWGQWAGFFQRHLCQAMVEGHRFLLHKLGVPEDARAFDSKCESTFGALRLYPFVRRYNCEEAVGYRKALSGGGRVTEESPHLVPVSCWNDLLSPEEFAPSERISPLELTVWLRHGVPYGTAFEGGLPLRQNHTGKPGGGLATLEALHQLAPYDRTISHSIFVEKYHEKPTFEQIQELYGPVLPYASYAMIRAAETVKDQPVRFKKIMTEAAQLDGFCYSVLGDYCAARNESDEAAEYYRKEEQNCPDTVGNSYHACWRVKYYLSKGNTNEAQRIADDAGEVYSAVGLEAKAYFLEAIGSYTNAFEWYSKIEERYDNPAPLLNFCNLYKTRTGDNRFDNEIRKRTESIFPGGRQKVTLDQFTAVPTEGIVFEAQSELMRQVGLGTNDVVVALNGIRIHNTPQYNLERALSSTPEMVLIVWQKGHYREIKATPPNHMFGVGMRNYHAE

>C5B50_01755
MDSRFPPARTFNSLLVLPVCLIAWTSVASGAQPDYRVQGEAKLESYDKVYLGQIRKDVGKVYPRLLARLQKCGFDVVELKPENLPFTSQGSGFLIDADGDVLTCAHVVGKEAKATLWIDGTRYLGRVTAIDTNLDVAVVRMEGTHPPFRPLPFASDPACRLGQEVYGMGFPLANLLGTSAHISKGLVSAESGMEGETNHVQISAEVQPGNSGGPLLNPQAQVVGMIAATINPLRVLAETGGSLPQNVNFAIKGPLLLQFLTKAGLTLPGTNSTPQATFDQATKSLALIRGGIVDEQRLRLKPLVCICSYVEGRAHQFLALRIVFTDVRAFRHVLRADLVKVTGRSMDSDLDHIFKEICAKTLTDRDNPFGPKKSK

>C5B50_01760
MGSVEASDAMVKAANVELVKTIPIGGGLITVICKGDVGSVKAAVDAGSKAAAKVGELVSSHILARPHEDLLKAFLGEANKK

>C5B50_01765
MAQQAIGMIECKGLCALLEACDAALKAANITLVGWEKIGSGYVTGFFRGDVAAVKAATDAGASAAGQVGQVISVQVIPRPHDGLATLGKWLQ

>C5B50_01770
MKILVPNLGSTSLKWRLFDFSSGDGRVLHKGGFERVTDYSKAIGDCLAQLKDAGHIHSEQDLAAVGFKAIMARGFNGCVRLNEEVVKAMEAFNGIAPAHNPPYITGIRLFAQRMPEVPLVALFETAFYQWVPEAAVRYAIPEEWYQMGVRRWGFHGASHKFIAERSAELLGREDVAERVRQLYVKGPEVRTASSALALKSNDTRGDNLSSPLRVISCHLGGSSSITGILNGVAIGTSMGLSPQSGLPQNNRVGELDSFALPFVMRSAGLTLDEAERLLCKESGLKALSGGFNDLRDIQTQAAQGNARAQLALDVLVYQARHWIGSLLFQLNGADTIVFTAGIGENRPALRLAICANAEDLGIVLDKALNEATLAKEGVISAASSRVKIMVIPTNEELVVAREAKRFLEIANTKNQRPGRAGHPNTGETSNSKVQTSKKLQASSPKTLAETNMEMRGFAGTLGRSADWNSAIHQTRSLRYGSSY

>C5B50_01775
MAHQAIGMIETRGLVALVEGTDAMLKAANVELAGPMTQVGNALVTAVVVGDVAAVKAATDAGAQAIKAIKGELVSVHVIARPHAEVDAVLPKRPAAKTS

>C5B50_01780
MFLARVEGSVVATKKDPSMDGRKLLLVRPQLVDEKDPTKFRPGANTIVAVDSVGAGIGEMVLFCQGSSARLAPSLKDAPVDAVIIGIVDAVDVLGKQIYNAKQT

>C5B50_01785
MKPVNEALIRDVVAEVLGRLGQSREGVPPAPQDSCGCKGNGHATTNAPSWASGPGKHGVFQDANEACAAAHEAFLRLKTKGMEARAKVVEIIKGMADANAVEWGRIELEETKIGRLDHKIEKLKIIKLVPGVEWLHPDASSGDHGITLEEYTPFGVVAAITPSTHSVPTLSGNIVNMVAAGNAVVFNAHPSAAKCAAMAVREYNKAIEREVGIENLVTIIEHPTLDSFKAICSHEAVRLLCVTGGPAVVKAAMQTGKRAICAGPGNPPVLVDDTACMKRAAKAIIQGAAYDNNLLCIGEKEVFALEWCADELMTQMEKHGAARLKQAQLERLTKEAFTFKKGQGAGCPEPIVNKALIGKDATALAKAAGLDVPEKTELLFAETDHNHPFVKEEQMMPFVPIVRVKSVEEGIEAARAAEHNYKHTSIIHSHDVEHMTAMARALDTTLFVKNGPCMAGLGLGGQGYLSYSVATPTGEGVTNPRTFTRVRRCVMVDNLRIY

>C5B50_01790
MLLKSTVKVQTSNFKFQRSLKLQTSNSATSAAVEVWSLEFIWSLEFGVWNFVSSYVPGTC

>C5B50_01795
MFLARVEGNVVATRKHRSMEGWRLLICQPINGAGQPEGSPQVAIDPHGAALHQRVVISSDGAATRKAVGDERSPARWMVVGVVDEAA

>C5B50_01800
MRLGTVIGRVTLSVTVPPLEGGRWLIVSPFTRDQYAAGSPNDKPALSSEPSLVVYDDLGGAVGQTIGFVEGREAACPFEKPTPVDAINTALVDEIFYSP

>C5B50_01805
MKQVISVRDLEDLLRKGEDVQALPDDVILTPSARDFLRELEGRGPFKPGPSAPAAASVKAVTSKSSAREIDAYFSSPAAHQLKLQICDIGRRLWHRAYVDGNGGNIAIRVGPDIALCTPTLVSKGFMKPEDMCLVDLEGNQLAGEKKRTSEILMHLQIMQRQPRAVATVHCHPPHSTAFAVAGVQPPTCMIPEFEVFSSVAIAPYRTPGTPEMGKLVADLVDKHNTILMANHGVVSWSHNDVEDAYFKMEILEAYCRTVLVASQLGKPVNTMTPAQLQDLLTIKQSLGIPDPRFGLKECELCDNDEWRPGVACALPNNGSVENVGTDAEAEELVRAITDQIMGQAK

>C5B50_01810
MNSHSKPADRVVDIANRLIADIQNELQIEFSHRKTKVSEEQLCSMLLLIQQRRESILTQQLPVKELRFSYLTREVTDSWPLGDDLANRVAEFEAYYNQL

>C5B50_01815
MKSLDQKLTEIKRSPSSRAFIIADAKDADMAFGVRAPGPRGYLSMRGERPARFSPEVWTRGEYGYRNLPEFLDIIREVVHQGLIDIMLMSAYVNEQLTIKDGLFRDSAVTPAARANDATDVWAVRHGCYTSEPAQPFRTASIDQIQCGKIECDRSSGEFPGANLGLYSVTFVNDLQQDRETLLAFKAFREEAERKKFRYFLEVFDPNVQSGVAPEKLGEFINDNIIRSLAGVPESGRPLFLKIVYHGPRAMEELAQYDPNLAVGVLGGSAGTTYDAFRLIHDAQKYGARVALFGRKINNAEHQLAFIEMLRLITDGKISPEEAVRAYHGVLAAKKIKPRLPLEKDLELTPQAMSYDSGTAPARSQRPKSEVGTAKPEARNSGWPVLSNGAPDFEKMNAAQRGAYDRHRLTQKFG

>C5B50_01820
MRSKVRKARKPALGRSESTEDHLERIQELIEQKGYARVADLAASLNLSTSAVSNMVRRLAQRGFVNYERYRGFTLTTTGRQVAQQVKERHTTLTEFLQLIGLDDQTVDREVEGIEHHLRPETLALLSQLVSFWRAHPEQVQAFKRFAKHPTARTGPGRPNANKRE

>C5B50_01825
MNSGRPDVLRKVSFDSSSSAAADQVAQNSDHGNGALPHGRGSDPLPLTAVRPRSAVHLSLEGVHGTVEVPKAEAGFWRKWKAFVGPAILVSVGYMDPGNWATDLAGGAQFKYGLLWVVALASLMAIFMQVISARLGVVTGKDLAQCCRDWYPPWTRWPNWLFCEVAIGACDLAEVLGSAVALQLIFHIPLLWAVIITGFDVLLLLALQRFGMRTIEAIVFILVATIAVCYLIEIFVLPQTQPELGEMAHALTHPGLAQTGMLYVAVGMIGATVMPHNLYLHSALVQSRKLQRDEASIRSAIRFNVIDSTVALTIAFVVNAAILVLAAMVFYGRTSAHLPGGQIVTFSPNSDWIRIAYLTLAPLLGTAAASALFVIALLASGQSSTITGTLAGQVVMEGFMHWRLQPWLRRLITRALALVPAILIIGLRGDSSVNDLLTLSQVVLALQLPFAMFPLLHFTCSRKRMGNWKNGLFLIIAGWASALLITGMDLISLPESLKSAWTTIVGGN

>C5B50_01830
MLRPLRRQLGRKLAAALVRLEADAEVQARYDELADKNTEGTLTAAERRELESLVRANSILSLLKVQARAFLQQQKAA

>C5B50_01835
MDPELRELVRTRVRNRCEYCQLSQEFSELRFHVEHIIARQHGGSGEAGNLALACPDCNFLKGPNLTAMDPRSRRVTRLFTRGETVGVTISSGKARGIQAKHQSAAPRLRCSR

>C5B50_01840
MNSKKFLVAAAAFQFAVASAQNFSVDWFTIAAGGGSMGASGPYSADITIGQAVAAAGPDTGDYAFTGGFWTLLGFPTSSGVQTNTDYGVSVCTNRITGTVRFNNSNPAILDLLNAPGNEGMQDVFIYANSLPRGYSSTSGWQPSSSKTSSDYSVVVDTDCTNSTGVTYEITPGIALGAGEAQYYTFNSKTAAPVVAGLAGPVVDFVECLGVVQFNFVDEFGSPVSVTGGNIIGDYYNAYLSAIPNGATQQRFYARGGETHVFRLTLYRGSDVYSDRQVHSVSTNLMVGCDTILNVNIVIPSLSTLGQITGTVHMLREFEWNIHSFNNVPDWTTVLANNGPFSNQRWARLGGDDTNTPSSGAFSLVNVEPSTADPNSAGYSLQAYMMFRANRRVEAFYSPTLGFGSNPAVAVTPGATVNLSNIFQIDPGYVRGAIRLQGPAETPGHPSMLRGVFHCGDDDLNHDGIPDVASYYGVYESLVGYDGVDRAGADAHYTAANGFGYADFDGDFDAITSSYLGNYELALGGLQGERSLWRHSYFSVSVGSPTWTDSPDDYSNFYAITDRRTNSVEVIPNQPVTNDLAYGFGEVIVHIFSTSASFSRPQIQFFGGLTGNNFLGQPADYHTDWGTAAGTPFYYPTNHALIRLLLPEGTYNLYPIILPQGYGNGTVSLTPIDVTVGAGQRLDLGTCLTLDLAIPGHSLTNLLTLSGSVLTQCSNIVGAIFYQLNGGPPVNLCSTCGINPNFTFTVPLVPGTNSLTVTAQDDQGAVSSISGVIQYDAPAPLLSILLTDTNTVLVSWPSPSTGFRLVQSTILSPGSWADVTDTINDDGTTKSVLVSPAGGKRFFRLSNP

>C5B50_01845
MSTQILCKILKPNLPLKRSAWSSQAMLSLALASLALRASCGSWAPVNQTFTNRLGLMLLLSDGSVMVQEYGGRNWFRLSPDAQGSYVHGTWTTMASMHDTRDAFSSVVLRDGRVFVAGGEYGSGASSAELYNPLKNTWTYTRDLGVSFTDSMAKILPDGSVLVAPNGLTQTCIYHPDSNRWTTNSGILARQNEASWVKLPDQSILTVDPGSLVSERYIPSLGRWISDATVPTNLWIDLPGYGGGEIGPALLLPNGKAFFLGGTSHTALYIPSGSTNPGTWMAGPDIWHGLSAADAPAAMMVNGKILCAVADPPYVQSGQAVFPSPTSFVEYDPDANSFSPVSGPPGDATGPPQASTMLDLPDGTVLLSDTSDQLYIYDPQDGPRSAAIPTISSVGWSDAGSLHLAGTRFNGISEGAAFGDDAQMDSNYPLARFADDDGNLQYGRTYNWSDTGVLTGDKIVSTDAAIDWALLRGAGPYSLSVVANGASSLPVSFNPPIWLDYSYPGPFRVGTYSFPYNSLSEALDNVSTGGAIAIKPGGAPETLTITKPVKLFAVGGPVTIGR

>C5B50_01850
MVVILAFSLPAPKGFSQGTAFSLQGRLNTNSVPATGTYDLRLSAYDATNSGNLIAGPITILGVNVANGVFSTSADFGGSVFTGPARFLEMAFASSGSGTFLTTPQRQQVLASPYSIFAGVAKAVASGSAVKSFNGLTDSVTLQGANGITVTPTGNTLTIGYNGTSPSQFWNPTTDNSIYYSGHNVGIGVTYPSNRVTVGTLSTSYGIEHTDGRIRLATYVGNGLLDTEGAGLGTLSNHRLDFFVNAGGPSMSLDTRGNVGIGTTLPVSDAKLTIQSHVNSIGTVFPHYGLEHTDGTVELSSILDGTGAWLGTRSNHPLNLYVNDGYSFGTSSLTIDATGNVGIGTDSPQTKLDVRGITRTCALTITGGCDLAEPFAVDGSEIPAGSVMIIDENHTGGLKLSQQAYDTRVAGIISGAQGINAGITLRQAGTFDSGPSVALSGRVYARADASYGAIKPGDLLTTSNTPGHAMKVSDHAKAAGAILGKAMSSLGQGKGLVLVLVTLQ

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021