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BMC type: PVM


Organism: Planctomycetes bacterium RBG_16_64_12. Bacteria; Planctomycetes.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

   A2V98_10000 (fasta)
     A2V98_10005 (fasta)
      A2V98_10010 (fasta)
       A2V98_10015 (fasta)
        A2V98_10020 (fasta)
           A2V98_10035 (fasta)
              A2V98_10050 (fasta)
                A2V98_10060 (fasta)
                        A2V98_10065 (fasta)
                               A2V98_10070 (fasta) HMMaldol_2_pvm1 PVM (details)
                                 A2V98_10075 (fasta) P_adobe PVM (details)
                                       A2V98_10080 (fasta) HMM02441_01 PVM (details)
                                         A2V98_10085 (fasta) P_slate PVM (details)
                                                     A2V98_10090 (fasta) HMMalddh_1_eutpdugrm PVM (details)
                                                       A2V98_10095 (fasta) P_dirtyPink PVM (details)
                                                                 A2V98_10100 (fasta) HMMacetkin_1 PVM (details)
                                                                   A2V98_10105 (fasta) H_purplishGrey PVM (details)
                                                                     A2V98_10110 (fasta) H_vividBlue PVM (details)
                                                                          A2V98_10115 (fasta) HMMptac_2_mix PVM (details)
                                                                                A2V98_10120 (fasta) HMMreg00455_2_PVM PVM (details)
                                                                                   A2V98_10135 (fasta)
                                                                                           A2V98_10150 (fasta)
                                                                                                   A2V98_10155 (fasta)
                                                                                                               A2V98_10160 (fasta)
                                                                                                                     A2V98_10165 (fasta)
                                                                                                                             A2V98_10170 (fasta)
                                                                                                                                        A2V98_10175 (fasta)
                                                                                                                                                           A2V98_10195 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_purplishGrey
       H_vividBlue

BMC-P(map on tree)

       P_dirtyPink
       P_adobe
       P_slate

(complete list of loci)

Protein sequences:

>A2V98_10000
MKTRVQKWGNSLALRIPKSFAAEVGLAENAAVDLSVRDGRLVVEVEAAEPLRLEDLLGGITDENLHGEWQTGPAVGKEVW

>A2V98_10005
MKSATRGDDTSRVEVSGISPHGIWLLLGSEELFLSFKEFPWFRDAPVGAVLHVERPQPHHLYWPDLDADLSVDSIYHPERFPLISGKRPNKA

>A2V98_10010
MCILFVLSNPCDVGVLRVFDLDVTVLAPNIFNFGASVCKLPHHDNVRNNQCHNDHEQQER

>A2V98_10015
MPRIPGVNHLDAVRALEKAGFQIVRQGNHIVMSDGTRQVTVPRHNPIKAFTMGGIVQDAGLPVEEFRKLL

>A2V98_10020
MKYKIVMHRTDEGVSVSVPALPGCWSEGDTEEEALANIEDAIRDYLAALEDRFRDAEVREIEVQV

>A2V98_10035
MSFSFDAQQGLVVVRAERTGPSGIAVVRLALDTGATRTLINASLLVAVGYDPAASLERAEVTTGSGVEFAALISVSRIVALGRELSDLPVLAHTLPPSAGVDGVLGLDFLRGQLLTIDFVNGRLTLAELGVSRLNQPQKERRHTLL

>A2V98_10050
MSQNAGDSGRRGAVAVVVRDARLLVIRRSRFVVAPRTFCFPGGALEGEESEEEALVREIREELGVSIRPKRRIWRSVTPWNVHLSWWLSHLEPDARLVPNPDEVESVHWHTPEEMAGLPNLLKSNQHFLCALASGEIDLVT

>A2V98_10060
MVQGVGFRYTVRQVAARFGVTGYVRNLPDGRVLLVAEGPTEELDRFLAAVRSAMGRYIDGEHETVGPATGRFDHFGIRH

>A2V98_10065
MSIAWLKPLWVVAVGVAAAAAVLFGVILVLQVLAPKVTAIARTTTKEALSQPLFYVLLAIGIFAILLFPFIPYNTFGEDIKMLKAEGLTLIKILAIILAVWTASVSISEEIEGKTALTLLSKPIGRRQLILGKFLGVIGPVAVIFIVLGAMFLSSVSYKVVYDARESSLPEPEPQQCQAEMIQIVPGLTLSFMEAVVLASISVAISTRLPMLANLVICVSIYVLGHLVPLLVNSALGEFAIVGFVGRFLAAVLPGLEYFNMETAISTGQEVPLAYLAVTAGYCVLYSLAAMLLALLLFEDRDLA

>A2V98_10070
MVHVHKIKQEICDIGDRLYKKGFAAANDGNISYRIGENEVVCTPTLMTKGFMKPDDLCIVDMEGNQVAGRRQRTSEVKLHLAIMKERPGVKAVVHCHPPHATAFGVAREPIPQCVLPEVEVFIGDVPITKYAIPGSDEFAQTILPFVHKANVIILANHGTVSFDETVEKAYWWTEILDAYCRILMLARGLGRINYFTEPETRALLDLKEKWGYQDPRRDIENCDLCANDAFRESWKETGVRPQAFQPPRFAGAKPAGAAAGSNGARATPEQEALIQAVTDRVMAALNRAST

>A2V98_10075
MRIAEVIGTVTLNRWHPTLAGARFKLVVPLGLSDLLGQGGQPAEELTVYDELGAGLGSRIAISEWAWAAQPFYPDFKPIDAYNAAILDTLSVETPEDYQEQP

>A2V98_10080
MAEPSIDVEKVVREVLAQLGVAPQSQSAAVREASASGSPAPSSSAGKPQARVPAASNEPDGALAVPGPVVTMAELEGRLEGIRRLVVRPQAVVTPSLRDELQKKNITLVYEQPAPAACAGNGRLVMTVLGSRFDAAPLTGALQNEGIEVDARRADCLIAATDQLAGEVSRPDTVGLVLSRYPAVALCLANRHRGVRAVLGVDAATASADAASVGANLLVVDPESTELFQLKQMVSRFCREGPRQCPEVLRKRLG

>A2V98_10085
MMSGRVIGTATATLKHPSMKGWRLLVIQPFMADGRSPDGDPILAVDRLGAGRGETVIVSSDGRATRELLQSDNTPVRWSVIGILD

>A2V98_10090
MQVNETFIRSVVEQVLHRLGSNGSASPLVVGGGYQGRFGMFNCVDEAVAAASEAFEQLSRRTLEDRKRIIDHIRRISIDQCVELGTMEMEETKIGRLDHKIEKLKVLGERAPGVEFLRSEVFSGDHGLAVIEHAPFGVIGVITPVTHSLPTITGNAVSMIAAGNTLVINPHPSGKRVAAEGVRRFNEAIYRDLGIDNLMAVITEPSLETADAIFKHRGVALLCVTGGPGVARAAMRQSKRAIVAGPGNPPVVVDETADLDRAARSIIRGGAYDNNLLCIAEKQVFVVDQVFDAMMAAMDRAGAVRLRASEVDALTKVAISTVGEGNQKHDVPARDFLGKDPVVLAAGIGKTLSPKVEMLFGETDESNPFVPVEQMMPFLPFVRCRNVDEAIGKAHRSEHGFRHTAIIHSTNVNNMTKMGKVMDTTLFVKNGPSMAGLGLGGEGYLSFSIATPTGEGPTTPLSFTRERRCSMIDNLRILGK

>A2V98_10095
MFVGKVTGSLVSTQKVESMVGRKLLVVEPYRLDPETRATLKTTGRTFVAVDTVGAGEGEYVLVTQGSSARLTPETENLPVDAVVIGIVDSVHVDHLRVYHKEGRPSK

>A2V98_10100
MKVLVANLGSTSFKYRLLDMDDESQIARGAIERIGSPESRSTVESGGKRRQHVLAVPDHAEAVRQCLAQLTDPDSGCLADAKEVAAIGFKAVHGGSMSGVQRVTDEVLAAMEEMNDVAPAHNPPYINAMRLLRERFPEIPLVAAFETGFHQTIPDRNRFYAVPYEWAEKALVRRWGFHGASHRYIATRTAELLARDDLRIISCHLGGSSSLCAIRNGQSVATSMGMSAQTGLPHNNRAGDFDAFALPRVMEHTGKSLSEVLTVLASQSGLLGLSGVSGDLRDISEAARQGNARAQLALDVFVSSVRHYLGAYLVELGGADVIVFTGGIGENRAPFRAEVLSDLEELGIVLDPEANERVRGEGPIHADRSRTHVWVVPTNEELIVARQVKELLEG

>A2V98_10105
MQDAIGLLETKGLVALVLATDAMAKAANVEIAKRVQIGGGLVTTVVRGDVGSVRAAVEAGANAAGQVGELVASHIIPRPADGVVKAYLS

>A2V98_10110
MEALGMIETKGFVTLVEASDAMMKAANVEFLGWDKVGSGLVSAFVTGDVAAVKAATDAGANAASRIGEVVSVEVIPRPHDDLGVVLPQFTKSKKPAATPAS

>A2V98_10115
MSIAAGVDRSLVEQIVREIVLRQVGAPAGMPELVVSISARHVHLTDEDVETLFGPGHKLTPMKDLYQEGFFAAEETVMVVGPRRRMLPSVRILGPTRPASQVELAFTDGISLGIDLPVRASGKIEGTPGCVLVGPEGVVDLEQGVIRAERHVHMSPQDAAHYGVKTGDRMSLRVYSRCATVFEDLLVRAEEGIKLEVHLDTDEGNAADLEHAEKVELFKP

>A2V98_10120
MLGEERRSRLLELVRVRRFASPRDLARELAVSESTIRRDLEQLEEIGSAKRIHGGVLYTETSPRLPHFDARQAQHWEQKRAIAARTAESIEDGDAVLLGGGTTTYEVARLLVGRPLHVVTNSLPVANLFVTHPGSDLVLLGGNICPRTGVAQGPYAERMIASLRVRRTILSVAAVNDEGFFDNNALLVGTERAMTRAADELFFVVDSSKFGHQSLVHLCGLDAVKNLVVDNGISEDWRSKLLAAGIKLLVAGPADNV

>A2V98_10135
MLVLTRKPGERIFIGDDIIVTLISIRRDDEYGDRIRIGLDAPSEVPIRREEVPDERIRSPAPAAESSFDSVELESRQVGQKIEALSHQIARAPQTASPHAKRAGELSEVLISLRRRCDELLDRLGKEAAPGATS

>A2V98_10150
MSVTFPEIRIGDPIRHEGLAVFPVFAEPIRGVDYDLSDEAINKGTVTVEEVSEAGSVPDLSVENKGDVRILFLEGEELVGAKQNRVLNTSVLIAAHTKSKIPVSCVEAGRWGYKSRRFGSGGTHSPSMLRRVLKASVSKSVRAKRGHRSDQGEVWEEVARQQKALGAFSGTSAMSDTFEAHRKRLDEFREKLHYVEGAVGAAVAVGGKVVTIDLFDKPTTCGRVWNRLLSGAMLDALEVRQAETQAERADVERVMTSLRNLSWEPAEPIGEGEEYRAESPTGDHASALVFDGTLVHGSVVCAT

>A2V98_10155
MWLVSYDRGYQNLKDDFDVFETEGLCIASEDNKVSVVRTFTENIKRLPEGYRSLQELRERLFKQFRPDCVITDFEPMTAYLANHYSLPLITIDNQHRMRYLEYDCPPHLAVEARVTKTIIRAMVPRPDVSLVTTFHFGETTNDRTFLFPPILRREVLAQQPSEGDHVLVYLTSGFGSFLEELDHFRREAFLVYGYDRSDRVGAVTFKPFSKDGFLRDLAGAKAVMATAGFTLISEAFYLKKPYLAMPMRGQFEQELNGFQLQRLGYGKSVSEVGAEAIGDFLYRVPDYAERLQGYEAGDNRAIKEKLDELLENDCALARRFHDQRT

>A2V98_10160
MQKPGLLLLLVLAAAGGFGSRLQAQTELDSLAERAEIRYAEVPRKVLAFYYPWYGNADVEGGSGRWSHWSDVDQQKDEIGSSTHYPTLGPYDSHDPKLIAQHCAWARQAGVDGFIASWWGKDSFSNEAIPRILDACQKAGLEVTIYYETVPGPRNAHAAAEDVLYVLNRYGEHPAWLRVDGKPVLFVYGRAVGEIGLGGWLEAMSEVNRRYPKKAVFLGDQMSRSAARIFDGIHTYNTAGELRAKKLPEVESWAAETYAAWVSAADAFGRISTLTVIPGYDDTKIRQPGLRVERYDGASYRCQWEEAVKADPHWILITSWNEWHEGSEIEPSSQHGQQYLEMTAELAARFKAQPRRARPSHEVQDAGITEQEKREQLEKLDGIRIGLLPDSGLSTVWPLLRLPNRPTPVSWEEVARWSASAAEKYPVLIYAAEETYRQTVKQPGDVEEGLLRYLKAGGFLVVLPSGPMPFHYD

>A2V98_10165
MARWTVLVTIATCAVLGWALATRAKPRAETPPVYGYEIVNTYPHDPAAFCQGLAFRDGFLYESTGQYGRSSLRRVDLESGRVLKQLPLSPGHFGEGIALSGDEIVQLTWRSRVGFVYERESFERRRVFRYTGEGWGITLAGERLAMSDGSATLRLLDPTTFRVVDTITVRSGGAPVDQLNELEYVEGEIYANVWGSDRIARISPKTGEVLGWIDLAGLLAPHERASDDAVLNGIAFDPQQNRLFVTGKLWPKLFEIRLVPPR

>A2V98_10170
MGLIGRLIGWLTKGRGHGVEELARRLDSDLLDLSRFQPDYRPFTIPKRSGGQRRILAPERHLKRLQRRILIRLLARLRAHPAATGFERGKSIVTNARAHQGRAVVLRFDLVDFFPSTTAERLRKYLRRIGWNRPATEILLRLCTYEGGLPQGAPTSPRLSNLVNYRLDARLAGMAARLGGVYTRYADDLTISLPDEEQEKDWTIRSGPPPLFGLETNRDKIRFLQAFVRRVVEEEGYRLHRRKKLSVRRRHHRQEVTGLVVNDRVNLPRSTRRWLRAVAHRARLARQEGPGPSRPPSGGLPKRPTLTPAQLQGWQALESMIARQRTEG

>A2V98_10175
MNRSTVNRLSLGAALVALLLVAADWTRFRGPDAEGVSDDAGVPATWSAEENVVWKTPLPGFGASSPITLGERIFLTCYSGYGLNADEPGDPENLQLHVLAIHRADGKIAWEKTTKARLPEKPYDEGFIRLHGYASATPATDGKAVFAFFGRSGVLAYSLDGEPLWQAYVGDETHPWGSGTSPVLFKNLVIVNASIESQSVVALDNSSGQEVWRVGGIQRSWSTPLVVDVPGGAPELVVSMEGKVLGIDPATGEELWQCAGVKDYVCPAVVAHDGIVYVTGGRNPQTFSIRAGGRGDVTATHLLWEINTASKIPTPLYHDGHLYWIDNRAVAFCASAETGEAVYEERLEVSGRGDKVYASLVLVDGKLFGVTRENGTVVLAAGPEFKLLAQNDLGDSSIFNATPVPGNGQLLLRSDRFLYCIGK

>A2V98_10195
MAKSEAAWGIDIGNSSLKAVRCRLGDQPDRIVAEAFDYIEYPKILTQPGAEPERLIGDALAQFQSRNSVRGDQVAISVSGQSGLARFIKLPPVEAKRIPDIVKYEARQQIPFDLQDVIWDYQQIAGGMEVEGFVLEAEVGLFAMKRDQVSRALAPFASVGINVDYVQLAPLALYNYLVFDQLHDLPSPDEYDPESPPDSYIVLCMGTDATDLVVTNGYRVWQRSIPLGGNHFTKALTKELKLTFAKAEHLKRNASSAQDPKAVFQAMRPVFNDLLTEIQRSITYFTSIDRSAKIAKIVTLGNAMKLPGLQRYLGQSLGYEVVRLDSFRSLIGPEVVNAPAFSENLLSFGPCYGLALQALGKGALSTNLLPREIVKDRLVREKKPWAVAAAAVLLLACTISFVSFSRAMGTMDASEFGTSEKEAAAAVSESQALKSGESAAKTKFQATDEIGKNLVSNVEGRLRWLELLRAVNGCLPSDPPEQRPEEIMLRNELHVTSLQCFYIEKLDDWFAGRKKWYQPPAQPKRASAAAGASAADGADPNAADASTAGSPAAGAAVETAAEGAGNGPKGPGWVVRLTGYHYHNRRTASDANFVQGAQFVHQTLIRSLEGLEKDILLPKADEEGELVRVSMKELGIGYPVLINPGQFVPEKVANPNVEGASPVGTGSGATGFAPDAMKGPGAAAGLGPGGLGGTRPPTGRASSEKDKDAEDAVVELDRFDFEVEFVWQPALPTERLEKEEQTEAKRQGAQPGEA

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021