Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: PVM


Organism: Verrucomicrobia bacterium GWF2_62_7. Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

                         A2107_13690 (fasta)
                              A2107_13710 (fasta)
                                    A2107_13715 (fasta)
                                             A2107_13720 (fasta)
                                               A2107_13725 (fasta)
                                                  A2107_13730 (fasta)
                                                        A2107_13735 (fasta)
                                                           A2107_13740 (fasta)
                                                             A2107_13745 (fasta)
                                                                                   A2107_13750 (fasta)
                                                                                      A2107_13765 (fasta) P_dirtyPink PVM (details)
                                                                                         A2107_13770 (fasta) H_vividBlue PVM (details)
                                                                                                    A2107_13775 (fasta) HMMacetkin_1 PVM (details)
                                                                                                      A2107_13780 (fasta) H_vividBlue PVM (details)
                                                                                                        A2107_13785 (fasta) H_purplishGrey PVM (details)
                                                                                                               A2107_13790 (fasta) HMMptac_2_mix PVM (details)
                                                                                                                      A2107_13795 (fasta) HMMreg00455_2_PVM PVM (details)
                                                                                                                            A2107_13800 (fasta)
                                                                                                                                         A2107_13805 (fasta)
                                                                                                                                            A2107_13810 (fasta)
                                                                                                                                                   A2107_13820 (fasta)
                                                                                                                                                     A2107_13825 (fasta)
                                                                                                                                                        A2107_13835 (fasta)
                                                                                                                                                          A2107_13840 (fasta)
                                                                                                                                                                A2107_13845 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_purplishGrey
      2x H_vividBlue

BMC-P(map on tree)

       P_dirtyPink

(complete list of loci)

Protein sequences:

>A2107_13690
MFCYEVAGKMTFNARIIGSLGLVALSLATIGLISYRSTTNFIETTNAVNRSHQVLKNTGSLLTDLMNIETSVRGFVISTNEVFLEPYQVALPRMPEHLKTLRALTAAEPNQQRRLNELEPLILAKVKVVQTCISTLKKEGIEAASRLNGLEEGQRLMDRVRVVTTAMEDEEQQLLNQREERSKASAHFAMLITTALNMVMMVLLTWVSYTTLRYLADRKRVEEELARSYERLELSQKAGRIGHFEYFFQTNTLVCSELLEALYGVSKHRLGGTWESWMQCVHPEDRKAVNGVFEEARKNGQFDKEFRIIWPDNSVRWIQMRAEVHFDTARNPLRMVGVNRDITARKQAEEKAADTAAYARSLIEASLDPMVTIAADGRISDANHAAEMATGVPREELIGKEFSNYFTEPEKARAVYRQVFARGSVADCLLCIRHTSGSLMDVLYNATLYKDTAGHVRGVFATARDITQRKKAEEALRQSRDELELRVQQRTADLEREVAERKLAEGALRQSEEKFRRIAANIPEVLYSVDMRTQEFRYLSPAFEKMLGYTEEDIHNEDGRVAFLTRVIKKGDFEAQRDRLARLQTQPMEVVGIRDEEWWLCKDGTLKCIEDRWIPVYQSGRLVTTEGVLCDITELKEAQETVRRAKEDWERTFDAVPDLIAIIDSEHRIVRTNKAMAARLGVTPAQCVGQTCYRVVHGTDEPPDFCPHKQLLADGIEHTARVYEDRLGGDFIVSTTPLYDSEGKLTGSIHIAREITERKQAGKTPTS

>A2107_13710
MEVPTNETGPLTVIVAWRVLKGREREFEAWRHEIADAALKFPGHMGVNVILPSGGGREYVVIFRFDTYEHLRAWQESDIRRELLKKAEPFREQEPSYHLESGLEYWFAPVGPVSPPRWKMALVTVLGVWPAGMLVAWLLNPLLTGVPSALKALLSSCCIVILLTWVIMPTLVKMLRRWL

>A2107_13715
MKTELLNPQNSALVLIDFQPQMVFGVASIDRQTLFNNVLLLAKTAKIFNVPTILTTVESKSFSGNMWPEILDIFPNQEPVERSSMNSWEDAKFVAAVKATGRKKLIMAALWTEVCLAFPALEAMKSDYEVYAVEDASGGTSVTAHNAAMRRIEQAGAVPMTALQVLLEFQRDWARKETYDAVIATVKEHCGAYGQGCEYAYTMVHGAPPSRRNAKKG

>A2107_13720
MTDRRSGNAGKGSAAKQKNSVEGLAVRETDSRHPRTGTEEAPIRLRYLDLGLGEVAAGREVDLSEIVHEMPLSELARQLPQNFAVELYQVVKRFFQGPDGPCFPCPLVELRKNRGLLSALRARLPLINNLIELITDPPAILMDERQQLCFFKGTPVTLRPISFTYLFLLAQSPGQFVMRSAIYNQLWPGEMDYEGSDKPYEQQVTDHKYQLAAEIKKGIAGRLHLNLGEIEGMFSTQYKRGYRLNLSRENVLVFTKKDLLMIAFLFLLRRWFEELPGWLPFRRCLGSIEVWTSQFLL

>A2107_13725
MGEYSVLRKLKHLLRTKTAIVAAHPPIVARIDMMTFELARRIAVAAGMEALPAARCGVAIIPGPDTS

>A2107_13730
MKREGVRTFKSRLREDLKDPEFKRHYDEERQALKLAMKIAALREQKGLSQQELAKLMGTSQQAISRIESGEYEGFTLKTLEKVAEATGMKVKIDFVAA

>A2107_13735
MGVWLSKEGYYTAWQTNPHRFEYAQYFDPDFHEPDPKKPVVFMLRKKGVAEPLIHRKLKVNLASDGTPARVGLLRGDESGDAQIELQMWKSSERDEHGRFDWRVVIRTVAGGVLETKEEFPFTAPYGGYQKEVEIKNSVDLGKEWNAGAKVQCFLKFGEPPRYALMKAHILGTSRWAFVECWVNPSGSRNLEYDYQKDVTQQFNK

>A2107_13740
MPITYNQFQKVQELPEVKAARESFMEAQRRYSEAIKKAMGAKKTEDGGRGTEVRSQKSEVSGQKASEGGQSSAVGGLAAAGLSKGASLTIQVPPAGSGTNGAVKGK

>A2107_13745
MDTIKKTDITKEFRLHERDTGSADVQIALLTERINELTGHLKVNQKDHSSRRGLLMMVGKRRRLLDYLNQTDNSRYHQIIKKLKLRK

>A2107_13750
MQQSIRINIGNNDLILETGKLALQADGAVTVQLGETVVFVAAVAANKPQAGKDFFPLQVDYREKASASGKFPGGYFKREGRPTEKEILTARMIDRPIRPLFPVGYFCEVQVMSILLSADLENDSDILAINGASAALTLSDIPWNGPLGAVRVGRINKQFVVNPTHSQMLDSDLDLIYVGNETDMVMIEGCAQELSEDEVMSAVDFAQGFVKQIVAAQKQLAQQAGVTKRQVALRIVPPALQAKANTVAGPKILAALATQGKQARITAIAAVYQELLAAAQAEDPKVEEGIVKMAFDAIQYEQIRKYVLANNRRPDGRALDQLRTISSEVSVLPRPHGSALFARGETQALAIVTLGSLADTQELDTYTGGTPEKRFMLHYNFPPFSTGETGRIAGPGRREIGHGALAERSLEMVLPTPEKWPYTTRITSEIMSSNGSTSMATVCAGCMALMDAGVPIKAPVAGISIGLITEPGNRQKGVLITDILGSEDHFGDMDFKVAGTRQGITGFQVDLKIQGLTLELTRQAFAQAKVARAQILDIMAKTLAAPRPELSKYAPRMETLRIPPDKIGLLIGPGGKTIKKITEETGCKIDIEDDGSVFVFSTNPDGMARAKEIIEGMAAEIEVGKIYRGKVVTIKEFGAFVEVLPGKDGLVHISELADFRVRQVEDVCKMGEEIWVKCIGVDEKGRVKLSRKAALAEKDASAAEKK

>A2107_13765
MFLAKVEGSVVATKKDPKMLGRKLLILRPMLVDDKDHTKLKPGVNTIVAVDSVGAGEDEMVMFCQGSSARLANGLKDAPVDAVVVGIVDAVDVGGKIIFKTGK

>A2107_13770
MADAIGMIETKGLVALVEATDAMLKAANVKLVGMEKVGSGLVTAVVVGDVAAVKAATDAGAQAAKAIGQVVSVHVIARPHEETSVVLPKIAASSKK

>A2107_13775
MKILIANIGSTSFKYRLFDMTTEATLAKGGFERVTNYSDAIEKALAEMKASGALPRLEELTAVGFKTVLAKGVLGCAELTEDVLKAMEEMNEVAPSHNPPYIAGIRKFREKLPRTPMVGLFETAWWVNAPEAAKCYAVPQQWTDWGVRPYGFHGASHRYIAERVAKLLGGSDLRVISCHLGGSNSIGATHGARGVGNSLGMSPQSGLPHNNRVGELDAFAIPFLMKTHGLTIDQIVRSMNKEGGLLGISGVSNDVRDIVTAAEQGNTRAKLAMEVFAHSIRHWIGAYLVQLNGADAIVFTAGIGENQPQLREMVCANLDWFGIRLDPAKNAAHQRGQEAVISATDSRAKIMVVSTNEEIVVAREVKKLLESRK

>A2107_13780
MALQAIGMIETKGLTALLEGCDAALKAANVQLTGWEKVGSGLVAAFFKGDVAAVKAAVDAGAAAAAQVGEVVSVHVIPRPHEELPGLGKWISA

>A2107_13785
MNEGIGIIETKGYVGAVEASDAAVKAANVSLIKTIQIGGGYVTVLLKGDVGSVKAAVDAGSAAAGKVGELVASHVIPRPSPELLKSFIG

>A2107_13790
MSVPQIQRSTVEQIVREAVYARFRPTASVPKAPPNPLVVNVSARHCHLTQEAVEALFGKGAQLKPMKMLYQEGQYAAEQMVTLIGPRSRVISNLRILGPCRTLNQVELAFTDSIMLGFDVPVRMSGNIKGTPGCMLMGPKGFFEVEEGVIRALRHVHMNLEDAAFYGVKHGDKMKLRVGGECGAVFEDLVVRVDKSFKLEVHIDTDEGNACGLRPDSRVELLK

>A2107_13795
MLGQHEFLDLATLARDLKASESTIRRDLDQLAAKGALKRTHGGAMAVEHKTDELNFVVRDTRQADEKDLIGRATAALVENGMSVIIDGGTTTYHVAKHLGGKRIQVITNSLPVANQFSNSSMVETIMCGGFIFPRIGVLLGPLAEESFSKLHADVAIMSAGGITSEGITNSNNLIVAVQQKMMTAASRVILCLDHTKFGRHALSFAAPLEKIHTVITDKDTPRDQIAMLQKHRIEVIVAR

>A2107_13800
MEKSIILPQWIVVRLGNDMNWWVEKTSDEIFWPREGLSVLDPRQFRDIAERLGEYYAIGFQRMTFAKAFALFTAESELDEGRLRLKIALQPGEDAGDKLFALPLFVDDEQSTYRDLVDNLIGLRVKLLNKMHHYAHVVDDLELEEELVAKLNDRYFNGGSLHCYDEINEILSWSPAEWDGSDEADDKLRAVQEEDEKEEQS

>A2107_13805
MTRIASIIAREIIDSRGNPTVEADVILECGTLGRAAVPSGASTGENEVIELRDGDKKRFLGKGVLKAVANIQDKIAPALKGRCVANQVGLDKAMLALDGTETKSKLGANAILAVSMAAAKAAAIVKRQPLYRYLGGTNAHVLPVPMMNILNGGAHSDAPVDVQEFMIMPAGAPTFSEALRMGSETFHALKGVLKKAGLSTAVGDEGGFAPALKNNEHALEVIAEAVKAAGYKFGKDIFIALDPAASEFYDKDKKRYVFKKSDKSERTSAQMVEFWADWCKRWPIVSIEDGLAENDWEGWKLLTDKLGGKIQLVGDDLFVTNVKFLKRGITEGVANSILVKVNQIGSLTETFDAVEMAKEARYTAVISHRSGETEDATIADIAVATNAGQIKTGSMCRTDRVAKYNQLLRIEQELGANAVYGGKLRLR

>A2107_13810
MSQPARTSIRGVIWLALFILALTAFLVTYIPRLREAQHLRVEKYKLDEQLREQEAEHNRQLARQQALTNDPREVERAAREKLKLAKPGETVFRFEQGNNAPPPRNP

>A2107_13820
MAWIRFAVHIKSFTRLFSRSLPVTLLAATAIWAASPQLHAAEVAETRSALETDAHGWANILPPADLKGWYRVPVPPTGKLGREQWHLDAAKKVLVCDGDGGHDMLLTEKEYGDAIFHLEFRYTKVEGKTGYNSGAYVRNSKDGAIWHQAQFGDAKDGFLFGQTPAPDGKKRFNLAKQVTDKRVKPAGEWNTLEITARGKVLTLWVNGAVTCQFDECAAEKGHLGLEGEGYRIEFRNLKVKQLK

>A2107_13825
MNGMSREAQVKQLVGSVIKEWREKKLKISVDAFAERYGMSDRFARMIQWCSAPGGWMIRHVGDVAYNVSP

>A2107_13835
FDIVVWGKQAEVAAQYLSKGRPVLIEGRLKYDTWQNDKGEKRSKINVVAERVVFVGSAPRSGGGQEFREGGPAPERAEKAPAETPAEDIAPSAPAGGKEKDDIPF

>A2107_13840
MSEMPKRKCKLCEDQVQVDYKQPELLRRFITERGKIVGRHSSGACAKHQREITRAIKRARIMLLVR

>A2107_13845
MTTDVILLKQVKDLGAEGDKVKVASGYARNYLLPQRLATPATRANVRQLAELKKRRTEREAAELATVRELADRLSKLTLSISVATGPGGKLFGAVTTHHISEALVKEGFEIDHHKLELKHPIHALGTFDVDVKLHPEVTTSLKFSIVSKTAPGTEEAQAAEAAAKSPRARKPRSEAPAKATEPAEEKPATKKGGGKPPAGGKKKS

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021