BMC type: PDU1D


Organism: Eubacterium barkeri (Clostridium barkeri). Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       SAMN04488579_101209 (fasta)
           SAMN04488579_101210 (fasta)
               SAMN04488579_101211 (fasta)
                         SAMN04488579_101212 (fasta)
                                      SAMN04488579_101213 (fasta)
                                          SAMN04488579_101214 (fasta)
                                                SAMN04488579_101215 (fasta)
                                                        SAMN04488579_101216 (fasta) HMM10114PocR_2_grm PDU1D (details)
                                                               SAMN04488579_101217 (fasta) HMMreg12833_3_GRM3 PDU1D (details)
                                                                SAMN04488579_101218 (fasta) H_tan PDU1D (details)
                                                                     SAMN04488579_101219 (fasta) Tsp_lichen PDU1D (details)
                                                                                SAMN04488579_101220 (fasta) HMMpropdeh1_1_pdu PDU1D (details)
                                                                                    SAMN04488579_101221 (fasta) HMMpropdeh3_1_pdu PDU1D (details)
                                                                                       SAMN04488579_101222 (fasta) HMMpropdeh2_1_pdu PDU1D (details)
                                                                                                   SAMN04488579_101223 (fasta) HMM08841dhact_1_pdu PDU1D (details)
                                                                                                     SAMN04488579_101224 (fasta) HMMpropdeh3_2_pdusml PDU1D (details)
                                                                                                       SAMN04488579_101225 (fasta) H_pumpkin PDU1D (details)
                                                                                                           SAMN04488579_101226 (fasta) HMMptac_3_eut2 PDU1D (details)
                                                                                                                SAMN04488579_101227 (fasta) HMM06723EutJMreB_1_grm GRM3A (details)
                                                                                                                     SAMN04488579_101228 (fasta) HMM02441_04 PDU1D (details)
                                                                                                                      SAMN04488579_101229 (fasta) P_clearBlue PDU1D (details)
                                                                                                                            SAMN04488579_101230 (fasta) HMM01923cobtr_1_pdu PDU1D (details)
                                                                                                                                     SAMN04488579_101231 (fasta) HMMalddh_1_eutpdugrm PDU1D (details)
                                                                                                                                             SAMN04488579_101232 (fasta) HMMPduS_1_all PDU1D (details)
                                                                                                                                                   SAMN04488579_101233 (fasta)
                                                                                                                                                      SAMN04488579_101234 (fasta) Ts_paleMagenta PDU1D (details)
                                                                                                                                                           SAMN04488579_101235 (fasta)
                                                                                                                                                             SAMN04488579_101236 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_pumpkin
       H_tan

BMC-P(map on tree)

       P_clearBlue

BMC-Ts(map on tree)

       Ts_paleMagenta

BMC-Tsp(map on tree)

       Tsp_lichen

(complete list of loci)

Protein sequences:

>SAMN04488579_101209
MKCFDNWGEYEGANEGSGRSEKIWLTQTESGRIGLFKFRKSELTKEHVSEKLAQELATAVKLPCADIDLGRRDGREGCMSYLINKGDEELIEGIRLIGQKYPSFRADQLFDKDTQSYYSLGMILEVLEDKFLQREALRMVIFDFLIGNSDRHQSNWALLINREKARRFCPIYDNGSSLCAYVTEEQIDSYLGNDRVRFISLVDSKSRSRIRIDSNKKKEPTHLEMLEHIRQHYVSDWLMQWVEESVMVLSPQKINKIVSTFEKSEVSEKRKELLCRFLNTKVVYLKKCLGRRIQNDKDSE

>SAMN04488579_101210
MTKIQNKDFLYLVWKDDVTRRQFVVGQLIHNGGYTFNYGLEVEAAIEAGFDLMLPFDDVKKTYHSAFLFPAFSSRLPDRKRVGIEGILKKYKLDSYDEYELLKRSGAKLPIDQFQFIDPIFAEQEKDGEIQRCFYVAGPRYYLGCDGENCEKALHLAPGDSLYLKSEPKNPKDHNAIQILDSDGNRIGYLPRYYCEGVSVLLQSGYEYTCMVKAVNTDNRCDECIWIVLTLKL

>SAMN04488579_101211
MKKLMKTRGFTLVEIIVVLVILAVIAAFTIPAMLGFVEDARGKAAIAEAREVYVAAQGAATELIGTLDKVPVNDNTNDGAYTQLRKDLGAKIKAYVKGDIPFSFGSLKGNANSNVLDVSLDNGNFKYPFTDETYLPQKKGCCLVLIGGAGETQIGEQVKVRLVSYVDQTGKYRINIKVNDQKGGASETVVQKKIGTAWQ

>SAMN04488579_101212
MKTKYIFVTGGVVSSLGKGITSASLGRLLKARGMKVSIQKFDPYLNYDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTDESLGKYSNVTTGKVYWNVISKERRGDYLGGTVQVIPHITNEIKESIQRVADSPANPDVVITEIGGTVGDIESLPFLEAIRQCKGDLGADNVIYIHVTLLPYLGMAGELKTKPTQHSVKELRSIGIQPDIIVMRSEKDVEEGMKDKISLFCNVDKEAVVSNLDASELYEVPLLLEKEGLANLVCEKLHLPECKPDLKEWKELVSKAKSLENKMSVALVGKYVELHDAYLSVAEALRHGGIANNTVVDIKWIHSEDLNEQNVDRYLGDVDAIIVPGGFGNRGIEGKIEAIRYAREHKVPFLGLCLGLQLTVIEYARNVAGMAGANSIELDEETPYPVISLMEEQKKIQNMGGTMRLGAYPCKLTEGTLAHKIYRTDEIEERHRHRYEVNDAFIPQLMEKGLVFSGMSPDGVLVEMVELKNHPCFIATQAHPEFKSRPNKAHPLFAYLVKAGLKFQESRKHQK

>SAMN04488579_101213
MKRFGFVKTACAVPQVVVADTVANTDKILELCQQAWNGGVGIVIFPELCLTGYTCGDLFAQSLLMDGVAEGLGRIGAWSQNKDILIILGAPIPVDGAVYNGAVAFNQGELLGMVPKVYVPNSHEFYEKRWFSSGASLKREWASFAGFDFPVGTDLLFRSEDWPELALGIEVCEDLWAPIPPSGKLSVAGAVLIANPSASNELIGKGEYRQELVKQQSARCNAGYLYCSSGTGESTTDLVFGGDALVYEKGTLLAKSTRFAFEDQLVVADVDVEALLHDRRTQSSFMDGVAFYGDAPLRDVFFTIRHGYKVERSFNPSPFVPADAERRRVRCGEIFNIQSMGLVSRLKHIGEPPMVLGISGGLDSTLALLVCVNACDRMGISRDRIHAITMPGFGTTDRTYDNAVSLIKGLGATFHEISIKDACVKHLEAIGHDLRVHDVTYENAQARERTQILMDVANDLGGIVVGTGDLSELALGWATYNGDHMSMYGVNAGIPKTLVRYLVSYVADMNGDGAIQEILYDVLDTPVSPELLPPDETGKIAQKTEDLVGPYALHDFFLYHVMRNGFAPEKIFFMACQAFDGVYGETVIYKWLRNFYWRFFSQQFKRSCLPDGPKVGSVALSPRGDWRMPSDAKVRLWMDEMDRIGECVEK

>SAMN04488579_101214
MHLRPKPWARPELLACGFFIEEPWTLKGHWAEAFPKSQPLHLELGCGKGQFIAELAQRNPDINYLAIDMIDTVLGLAQRNVRAAYDGAPVDNLRLTAWDIARIDTILDASDTTERIYINFCNPWPRRRHHKKRLTHPRQLEKYQAFLIPGGEIHFKTDDDALYDASLGYFEEAGFTLTQEIRDLHAAQDPLNIETEHEALFLKQGILIKKAVARLE

>SAMN04488579_101215
MQSYQEVLKLLQENQGNYLSGEEMGARLGISRGAIWKAIETLRRQGIRIDSKNRCGYAILEADGRLTPSAIALELGDAQAAEHIAVYDSLPSTNTFLREEALAGAPAGRTIIADTQTGGRGRMGRHFFSPPGSGIYLSVLYRPTPDSTLPQTITMAASVVIAQAIEAVTGQSPGIKWVNDLYLDGLKIAGILTEASVNIEAGGVDHMVLGVGINLYAPEGGFPEDIKAIAGSLYPSEKPTDPTLRLRLTAALIKGLWQLGHSRGIGDYIEDYRARSILIGEEVIITAGNHQHRGQVIGFDDSGHLLLSDNDGPIKNISSGEITLRIAATRKDTPCI

>SAMN04488579_101216
MRVLLKITDVFDVDVLQRIQDSFSEATGFATITVDYKGNPITKYSNFSKYCLKVREDAHCLECCYRSDAHGGIESARSGKPSIYICHGGLVDLAVPIMVKGNYLGAILSGQVRIPKEEMDKLPMGSSMELTDFSDHPEVQKLHDETLVTTLNQVRASADLLYTIANYLVEKQMIHIMQEELHSKNLELMEEVKHRSEIEAALKEADLKALQAQINPHFLFNVLNTIGRLALLENADKTQEMIYSFSDMMRYTLKKENNDFVTLGEEMEHVGNYLSIQKMRLGNRLDYTIDLDEDCSDVLCPFMTIQPFVENAINHAIEPSVTGGKITISAHMKEDYVSIRVIDNGPGINEALEAQLMEGTYEAGEGGTGTGIGIDNTNRRLKYYFGEDYGVRFNETVEIGTEVVIHLPFKVVPGRGLNV

>SAMN04488579_101217
MYKVFIVEDEHLEIEALELILTQQADDVDVVGTAASGTVALENIRKTTPDIVIMDINIPEMNGIEVLRQIKKDDPNTKVILITAFNEFDFAHQAIKAKVDDFLLKPIRPAQLIEAVNQAITSLKVNAKNKFDEKMNEVIFAVVQKKYNDSRVALTEYLDILYDYYGYDLISIQHEIQHFMEELNVVSVDTCNYDIKSTLRNRNNHQHFVNSYQNRYDLKVEIMKSIDKIFDKLMDIRDNRKNSIEDILNYIDRNCHKDISLDQVGEYANMSSYYLSKIFKKETGVNFVTYLTERKIEIAKDMLINTDVPIINIALDLSYHEPNYFSKVFKKSTGLTPTEFRREKKKLAAAAAAEE

>SAMN04488579_101218
MTNEALGMIETKGLVGCIEAADAMVKSANVELTGYEKIGSGLVTVMVRGDVGAVKAAVDAGAAAADKVGQVVSVHVIPRPHQDVEKMLPSF

>SAMN04488579_101219
MKDDLMNKLMEEVMKKMDEVEETGTCAAATGVCGLTEFVGTAIGDTIGFVIANVDSNLHEAMKIDPKYRSIGILSARTGAGPQVFAADEAVKATNTELVICEFARDTKGGAGHGSLCIFGAEDVSDAKRAVEVALNDLNRTFGDVYGNDAGHLEFQYTARASFACNMVFGAPIGKAFAIIVGAPAGIGVLMSDGALKAANVELIGFASPDNGGTKYSNEAIIFVCGDAGAVRQAVYAAREIGKQALEALGGPCPSTTTPYI

>SAMN04488579_101220
MRSKRFEALDARPVKKDGFVKEWPEVGLIAMNSAGDPTPSIKVENGIIVEMDGKCRAEFDMLDTFIANYGIRLDKAEEYMAMDSLEIANKLVDIHVPRAEVVDITTSITPAKIVDVLNKMTVLEMMMAQNKMRARIMPSNQCHVTNVKDNMIQIAADAAEAAIRGFDEMETTVGIARYAPFNALAIMIGANVGRPGILTQCAVEEATELDLGMRGYTAYAETISVYGTEPVFMDGDDTPYSKAFLASCYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCLYVTKGAGVQGTQNGSVSCIGVPAGVPGGIREVLAENLLAACLDLECASSNDQTFTHSDLRRCARSLMQMVPGTDYICSGYSATPNYDNMFAGSNWDAEDYDDWNVIQRDLKIDAGLQPADEDTVVAARAKAARAMQVIFKELGLTEITDAEVEAATYANGSQDMPDRDVVADLKAVDDLLGRGATAVDFIKALDRGGMRDVAESIFNIQLQKCAGDYLHTASKLSSDFEVISAVNYPNTYHGVATGYQISDERWQEIQNIPWADDPATI

>SAMN04488579_101221
MAINEQMLKSIIEDVLKEMSGAPAAAPAAAPVAAAAEGVELTAVGEASVGTAADEVVIGISAAFADAQTVNIIGVPHAKILKEMIAGIEEEGMKYRVVKVYRSGDVAVVGHDCAELSGSGVAIGIQSRGTCLIHQKDLPQLSNLELFSQCPLIDLDTYRAIGKNAAKYAKGESPNPVPVRNDQMARPAYQARAALLYLKEVEHVVNGKKAVEMQVTFK

>SAMN04488579_101222
MTQEQMLEQIVKQVMSSMSAAAPAAAAAGAVSAADYPIGDKRPELIVSATGKAYKDLTIDKLLAGQLSPEDLRIRPETLELQAQVAESVKRDAFAGNLRRAAELIAVPDARLLEIYNALRPYKSTKEELLAIAEELKGQYNAPISAALVAEAAEVGYARKRTKEFK

>SAMN04488579_101223
MIVAGIDIGNASTETALARITSGSPEFLSSGIVPTTGIKGTRQNIHGVFSSLKQALDKVNLAVEDVDLIRLNEAAPVIGDVAMETITETIITESTMIGHNPSTPGGLGTGVGVTVNIRDIKNAKKGDSVIAIIPREIDFENSSRMINEAVANGIYVNGAIVQRDDGVLINNRLKKPIPIVDEVALIEKVPLGMRAAVEVASPGAVVEQLSNPYGIATVFDLSPEETKQVVPVSRALIGNRSAVVIKTPAGDVKERKIPAGQIIIQGANKKATVNVDEGAEVIMEAIRSVAPVEDIKGEPGTNAGGMLEKVRQVMSNLTGQSPVNIKIQDLLAVDTFVPQSVRGGVAEEFSMENAVGIAAMVKADRLQMSMIAEELEKELGVKVEVGGVEADMAIRGALTTPGSNKPMAIIDMGAGSTDAAIINRAGEIKSIHLAGAGNMVTMLIGSELGFDDMGLPEDIKKYPLAKVESLFHIRHEDGTVQFFDTPLDPRTFARVVILTPNGMVPVPGNHSLERIKQVRRDAKEKVFVVNAIRSLERVSPTGNVRDMEFVTLVGGSALDFEVPQMVTDALSRYSIVAGRANIRACEGPRNAVATGLVLSYGEGE

>SAMN04488579_101224
MPSPRDLSYLTAKVNEMNVNFEAPKPEIKVYYVKNTVPKDILVEVLLGIEEEGLPFSLEEKDKKAAVELAYKAAEASHLGVGIGISDQIVLQYIKLKEDEPLFIVSTGSDETTLRNIGANAARLVKRMPFKDVGNPEQ

>SAMN04488579_101225
MKQALGLIEAIGLATAIEAADAAVKSANVELLGMEACKGDGMQTIKVLGDVGAVKAACEAASAACDRGRGVFSVKVIPRPADGLAPMIYNNQTLGFNPEDTCDTDYYWAFSKYDQLKPTRATKEPVKVTCAEEIREEATEEENEE

>SAMN04488579_101226
MNEMERQIIEQIVINTVKRLMAEKDAPNRVPLGISNKHLHLTQEDVETLFGKGHQLTNLKDVKQPGQFACEETVKIVGPKGEFPKVRVLGPARPKTQIEMSLTDARSLGIKAPIRESGQLDGTPGVKLVGPCGEVALENGVMIALRHIHMTPEIADALGLKDKDCVGVETSGLRPLLFRDVLVRVSPDFAYEMHLDTDEANAAGLSNGDLLKVLKKQEK

>SAMN04488579_101227
MDWKSGNDTILEFNELIRSKKSNPYQGNLKVGVDLGTANIVVAVVDENNRPIAGATQGASVVKDGIVVDYIGAVTIVKKLKAQVEEILGIDLSYANAATAIPPGIMSGNTKIIANVVDSSDFVVTNVVDEPTAAATVLGIQNGAVVDVGGGTTGISILKDGEVIFTADEATGGTHMSLVLAGTYHISFEEAEEMKKHDDQRQVFPVIKPVVEKMASIVHRFIQGYDVDTIYVVGGACVFDKFEEVFEKEIGIKTVKPVEPLLVTPLGIAFNCQG

>SAMN04488579_101228
MVIKLDMNELINSEAFMDLFIQKVVDEVIRRIKNRPKTALVCFSGAAIGFKQAMDSLVKLKNDGWQLKVFLSDAALCVLTEDYIRKTLGVDKIHTSQTKTPQRELYADVDQIIIASTTVNTAAKIATGVCDNEMLTLINHGLMAGTPFICAVDGACPDNATRAQLGMGNASDGYRELLKNNLRALKNYGMRLVAAEDLYDACVGTPAGKVTKKEAPKPTACAVPEKALEAPAPVMNPDPFAEDPLTTKRIISRVDIIKNRGKQAVKVSANAIITEYAKDAAKELGICIERV

>SAMN04488579_101229
MHLAKVVGTIVSTQKDPHLVGCKLMIIKKINETSEFEKYSSQSTAIAVDTVGAGIGETVIVTTGSTARYVYGDKHTPLDMTIVGIVDEIQTADFDKKVN

>SAMN04488579_101230
MPNVYTRGGDKGETGLFGGNRTPKDDIRVEAYGTMDEANSAIGMAYALSKDDDIREILHHVQERIFVLGAELASDEKGRALLTDRIEQSDIDFMESTMEHYLAIIGQQKAFIIPGKNPASAALHYARTVVRRGERRIVTYRSQEPDVRPEMVKFANRLSDLLFVLARTEEFEETIREVVKGMGDKIDLGGGTETSGVPQEDPKKLLTIAKRIAAASRVKAEAMGVPIVFSCVDTGGNLAYYERMEDSLLASIDISQNKAFTANALKCPTSVAHDLAKEDSPLFGIQFTNNGRIVTFGGGYPLMVDGKQIGAIGVSGGTVDEDMAIAEAGLAILESK

>SAMN04488579_101231
MNIDTTGIEQIVKKVMESIDFAEENNVPVVDGECGIFQDMNNAIDAAFAAQREYMKLPLAMRSKMIAAIRETMKKKDHAETICQMAVEETGMGNFEDKLLKQYLAADKTPGMEDLMAEAWTGDDGLTLLELSPFGVIGSIAPTTNPSETIINNSIGMLAAGNAVVFAPHPRAVKTSNYCVKLINEAIKSVGGPANLIVSTAEPTLESSQVMMAHPKIRMLCATGGPGVVKSVLSSGKKAIGAGAGNPPALVDETADIEKAGKDIVDGCCFDNNLPCIAEKEVVVVDQVADYLIFNMKKHGAFEITDRKVIDALADLVCPGGKLNRDFVGKSAKHIAAAAGIDVPEDTRVLIMEAPADHLLVVEELMMPILPIVRVANVDEGIDLACELEHGNRHTAIMHSKNVDKLTEMSKRIQTTIFVKNGPSYAGIGVGGEGYTTFTIAGPTGEGLTSAKSFARRRRCVLVGGFDIK

>SAMN04488579_101232
MSSNLVEIVKSAGIVGAGGATFPTHVKIDAEVEIVIVNGAECEPLLRVDQQLMDLRAHHMLVALKAVMDQTGAKQGIVGLKKKYTPAIGALNKELPQFPGIKLHIMNNFYPAGDEQTLVYDATGRIVPEGGIPLNVGTLVINVETLLNIYDMMVDEKPVIDKYITVTGCVQKEITTQVPLGITVREALELAGGPTISDFVIINGGPMMGKIVDIDSFITKGTKGLIVLPKDHSLIISKTKSVQDTIKLAAMACMQCSLCTELCPRHALGHNLEPHKLMRIAAYGSTCDMTTQATNAFLCCECGLCQYACVMDLQPWKFNQVLKRELGAKGIKNPHHNHPDKADPFKDDKKYDVHRLITRLGLDAYDKPAPMVECKKTFTAVNLQLSQHIGAPAEPVVSVGDEVKRGQLIGEIPEGKLSARLFASIDGRVTAIKDGVITIES

>SAMN04488579_101233
MDFTMLITAFGGGLLAAAIGGVPSFVFTGLTVLAAVFGGEAGAPIVSFISFGSFFGPHVAFGGAVAAAAYAKQKGVLDNGQDIVTPLFQTQDPMVLVMGGVFGIIGFVIQWLLSAVLGGMVFGLVGWTDTVALTVVISGILVRLIFTKSGVIGKYDGAEPRKFFPSGQRLSFLIVVGLGIGVAIGGAAASLGLLAADGDAAALALFSNIGVIGFGIAAVSLAFLCMGLPLEGYHHVILPAGTTAMLLFMATLNPFVAVIGGAVMGVITSVWGEVMGMTFNSYADSHIDPPACTIWVWQLVNFCLLAMMFPAAGVFAA

>SAMN04488579_101234
MKKAIGFIEFKSIPIGIEATDQMLKSGNVDLISATPLCPGKYVTLISGDVGAVRSSIKNGEHVGGIYVLESHVIPNIHKDVLPALLGAGEVEEVKSLGIIETINAISSIVVADAAVKSSNVDLIEIRIARGLGGKGYVLLTGEVSSVKTAVKAAQVEMEEYGVITSYSVIPSPHKDIKQVIF

>SAMN04488579_101235
MKTISFFNLKGGCGKTTSAVNLGFLLGEKLKAQGKKLLYIDCDMQSNLTNSLMEYDLDRPCIYHLFTDENDVHEVIYPVRDNIDIIPSSLLMATIEPRLASMYGREFVLKRKLEEIQDDYAYCIIDCSPSFSIVTTNALIITDDIFIPVQTEYYAVDGVHLLEETLEYVSKSLGVSKSISLLFATLHDTRNNINNLQYDNLKVAFGERFMDSTIRKNISLVESPIFKQSIFEYKPRARGAEDYQRLFKEIEAKGGF

>SAMN04488579_101236
MARKSKLKSELKNHNSTIKEKNEIASKVIAEEETKKMGEETVGLVDDLKKKVKEAVTPKEQDNAAILKEAAEDTRKKAEAETKAKADADAKKKADEEAKAKAAAEAKKKA