BMC type: PDU1D


Organism: Propionibacterium freudenreichii. Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       PFR_JS22-1_1370 (fasta)
              PFR_JS22-1_1371 (fasta)
                 PFR_JS22-1_1372 (fasta)
                      PFR_JS22-1_1373 (fasta)
                                PFR_JS22-1_1374 (fasta) HMMalddh_1_eutpdugrm GRM3C (details)
                                        PFR_JS22-1_1375 (fasta) HMM01923cobtr_1_pdu PDU1D (details)
                                          PFR_JS22-1_1376 (fasta) P_stone PDU1D (details)
                                                PFR_JS22-1_1377 (fasta) HMM02441_04 PDU1D (details)
                                                      PFR_JS22-1_1378 (fasta) HMM06723EutJMreB_1_grm PDU1D (details)
                                                        PFR_JS22-1_1379 (fasta) H_tan PDU1D (details)
                                                            PFR_JS22-1_1380 (fasta) H_tangerine PDU1D (details)
                                                              PFR_JS22-1_1381 (fasta) HMMpropdeh3_2_pdusml PDU1D (details)
                                                                            PFR_JS22-1_1382 (fasta) HMM08841dhact_1_pdu PDU1D (details)
                                                                                PFR_JS22-1_1383 (fasta) HMMpropdeh2_1_pdu PDU1D (details)
                                                                                     PFR_JS22-1_1384 (fasta) HMMpropdeh3_1_pdu PDU1D (details)
                                                                                                 PFR_JS22-1_1385 (fasta) HMMpropdeh1_1_pdu PDU1D (details)
                                                                                                       PFR_JS22-1_1386 (fasta) Tsp_turquoiseBlue PDU1D (details)
                                                                                                         PFR_JS22-1_1387 (fasta) H_royalBlue PDU1D (details)
                                                                                                           PFR_JS22-1_1388 (fasta) Hp_euts_violetPink PDU1D (details)
                                                                                                              PFR_JS22-1_1389 (fasta) HMM10662PduV_1_mix PDU1D (details)
                                                                                                                  PFR_JS22-1_1390 (fasta)
                                                                                                                        PFR_JS22-1_1391 (fasta)
                                                                                                                         PFR_JS22-1_1392 (fasta)
                                                                                                                             PFR_JS22-1_1393 (fasta)
                                                                                                                                      PFR_JS22-1_1394 (fasta) HMM00465alcdh_3_mix PDU1D (details)
                                                                                                                                                PFR_JS22-1_1395 (fasta) HMMreg12833_2_PDU PDU1D (details)
                                                                                                                                                     PFR_JS22-1_1396 (fasta)
                                                                                                                                                          PFR_JS22-1_1397 (fasta)
                                                                                                                                                            PFR_JS22-1_1398 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_royalBlue
       H_tan
       H_tangerine

BMC-Hp(map on tree)

       Hp_euts_violetPink

BMC-P(map on tree)

       P_stone

BMC-Tsp(map on tree)

       Tsp_turquoiseBlue

(complete list of loci)

Protein sequences:

>PFR_JS22-1_1370
MPDNQPVISCEDLSVTLEGHQILFDIDAEVHRNETVALLGANGSGKTTLVRALLGLIPISGGTAELFGTPLSQFKDWNRLGYVPQRGHSQVANATVREVVATGRLANRHFFSRMHKQDRDAVDTALRRVELSHRAGDPLSVLSGGQQQRALIARALASEAELLILDEPLAALDIPTQESLARLFERLKSDGLSMLVILHELGPMERLIDRSIMIQLGHKIYDGPLMAGPAIDSGHHHPAPIGADQAVISGPEMRRPHLTKEA

>PFR_JS22-1_1371
MSVFALAFMQRALIAALLSGFMSPAVGTYIVQRKLSLLGDGLGHVAIAGVGLALLTGWAPTPVAIVICVVGAVSIELLRQSGRAPADVGLAILFYGGLATGVLLAGISGQGTGVLSQYLFGSLTTVSMSDVALVAVMAAIVIILSLGLSPQLFAVCADEEFARSQGLPVRALEICIVVMASVTVAVSMRTVGLLLVSALMVVPVAAANNLVTGFYRSMFTAIGIGVVVSFIGVTGSYYWNTASGATIVVSAIAVFALSWPVGSLLNRRRLARSQRIPDPETARDNAAEVAAHRPVDPSELVGDDGNHPRIQHGDHVDYLHGNHRHAPHGDHFDEH

>PFR_JS22-1_1372
MPHMEIISMNTERDPGPEQETTPAAPRSTMGREEAPRPRPRQTKQRQLISRMLENQSRFRTAQQLHADLRAAGDSASLATVYRVLQSLAEHGEVDTWRTPGGELAFRHCSPTHHHHLICYRCGRTVEIDAGPAEQWASRVAAENGFIHAEHQVEVYGLCPQCAAEIGEGH

>PFR_JS22-1_1373
MSTSHGASPGSLIPLAPGPSVPRTFAPAPRLLPRSVRVAGSPVTILTDRAGTPTPLERTPRPFTRAELEVAWVQWSALDPRLADTVLVLAHTALRWDEARALTVDDLVPHAHQIIVRAHCPGRVRRPLAPALHRRVPVSLRIRQALRRLASTPGPRGLVFTDPDGAPLRRATVRRVLDWYHTAPGHGLADLPATAAQLWADDGTPRAVVAEWSGRPAWSSRPRG

>PFR_JS22-1_1374
MTISPELIQQVVRETVREVISRQDSGTDAPSGTDGIFTDMNSAVDAADVAWRQYMDCSLRDRNRFIQAIRDVASEPDNLEYMATATVEETGMGNVPHKILKNRYAALYTPGTEDIITEAWSGDDGLTTVEFSPFGVIGAITPTTNPTETVINNTIGMLAAGNAVVFSPHPRAKKITLWLVRKINRALAAAGAPANLVVTVEEPSIDNTNAMMSHEKVRMLVATGGPGIVKAVLSSGKKAIGAGAGNPPAVVDDTADIAKAARDIVDGASFDNNLPCTAEKEVLAVDSIADLLKFEMLKHGCFELKDRAVMDKLAALVTKGQHANAAYVGKPAAQLASEVGLSAPKDTRLLICEVPFDHPFVQVELMMPILPIVRMPDVDTAIDKAVAVEHGNRHTAVMHSSNVNALTKMGKLIQTTIFVKNGPSYNGIGIDGEGFPTFTIAGPTGEGLTSARCFARKRRCVLKSGLNIR

>PFR_JS22-1_1375
MAAIYTRTGDKGTTGLFGGTRVPKQDPTVEAYGTLDEANATTGEAKARVEDPDMRAALQHIQQRLFVAAAELASDEAGRAVIANTISPDDVADLERLIDDSMAETGPQRNFVVPGRDLVSAALHRARTVTRRAERRMLTAAESRPVRPELIRYVNRLSDALYSLARVAEHRFDVARLEGLVRSVVEKHLAAQSPQPRVAWSPASGFVPADVSTTADPATRFGLARYDLDVLQAMAAAAQSRGAELGVPIVFAGVDAGGHLMLLHRMEDSLLGSLDLASNKAFTAAAFKQPTADLSEASLPGAELHGIQNSNDGRVVVFGGGLPVFVDGVLCGGIGVSGGTVDQDVTIASFAMSRAKEASRS

>PFR_JS22-1_1376
MFLAKVRGTVVSTSKDERLVGFKLMLIEQIGLQQEPVGRPEIAVDTVGAGTGSIVIVTKGSSARFAADRKDAPIDSTIVGIVDTVEIGPA

>PFR_JS22-1_1377
MNPDQLRAIIRQTLVELLAPAPRRALVVFTGGLLGFDECLGGLRALADEGVALDVVQTPSARRILDQHKIGALGLPQVDDHLVANHQMLIAPTLTANVAAKVSHGIADCLASNLFSEFIMSNRLVVASSTAVSPDEAPKRSIYPEMPSGYAELLRANLTALTSFGVRLARSQALARTALAAFDRRDAAHKDALIAQGIPAQALAACAAPAIPAPAPRPHGGGVSHRGTRVTDTRREPAPRGPVTGAPSTLKLISQGVVQKLDPGSCLAIRPDTKVTAAARDMAASRNIQITVVV

>PFR_JS22-1_1378
MAMTGMVVTTHVELPEQAIMRFAEQVRTGAIDEPTGQMRLGFDLGTANIVVAVVDAANHPIAGGWVHSTVVRDGVVVDWAGATSAVRALRADVEQRLGHEFTKASISIPPGISDGDIQVFANVIGAAGLDLDEVVDEPVAAARAMGITDGAVIDVGAGTTGVSILEDGKVVLSVDEATGGHHMTLVLAGSNNIDYDQAEAMKKDPQYREQVLGTIRPTLDKMATIAAQALGSRDVPAVYLVGGSSSFESAPAIFEARLHRPVVRPAQPLFITPLGIPMPAQEESR

>PFR_JS22-1_1379
MREALGLIETKGYVGSVEAADAMVKAANVVLVGYQKVGAGLVTVMVRGDVGAVKAAVDAGAAAAAAVGEEVLSRHVIPRPAADVEKLLPKQA

>PFR_JS22-1_1380
MQLTQALGTIEVLGLPAAITAADVACKAADVRLVGYETTDGMGMVTVKITGQVSAVQSAIAAARAAASQITSVFAESVIPRPNDQIDPVVLTPVTVGLGASPAARPGGGTSPEAATPEQMAAAERALDPADPPRDAEPAAPTTDPAPAPDPAPAGPVADDPAATAPAVPSQPKISPSQERPDKGTAGPSRNRRKAPQAGREAGKK

>PFR_JS22-1_1381
MNTDKPTINMRVSDQITADQIADICFGMEEEGVPSTVTWQASINPLELAHEASVESRLGVGIGVALSYAVITTEKLPAERPYIAVNLSRDAARNRAIGANAARLVKRIPLLPMN

>PFR_JS22-1_1382
MTLIAGVDIGNATTEVALADVAAGAPPRFLASAIVSTTGIKGTQQNTQGVFQAITQALQTAGRELEQLDLIRINEAAPVIGDVAMETISETIITESTMIGHNPSTPGGLGVGVGTTIRLDDLGQASAGEPYIVVADHTHGFLDVAARINEAAARVNITGAILQLDDGVLVDNRLTAKIPIVDEVKLIDKVPIGMPAAIEVAEVGRIVETLSNPYGIATMFGLSPDETASVVPMARSLVGNRSAVVIKTPAGDVTERHIPAGSLRFLGDRTAEVDVDRGAQEIMHAAESVGTIRDIKGEPGTNIGGMMEKVRVTMGRLTDRDPAGIEVTDLLAVDTNVPQKVTGGVAGEFSLEAAVGIAVMVKADRLQMQRIAEEMTEQFAVRVEVGGVEADMAIRGALTTPGTSVPIAILDMGAGSTDASVLREGQPARSVHLAGAGNMVTLLIKMELGLDSEEDAENIKRYPLARVETLFSIRHEDGTVQFFDEPLAPELFARTVVLHPDGMIPLPLRHPLEVIRQVRIHAKQRVFVTNAMRALAAVSPTNNVRDIAHVVLVGGSALDFEIPQFVTHALAEFRVVAGRANTRGTEGPRNAVATGLVLAWEAGR

>PFR_JS22-1_1383
MDSEELIRQIMGEVMANLNQDNVAFDKLPAAAPSTTGAAHRVDKSSYPLGEKVPEQIKSASGRALSDFTFDKVKSGELTAKDFRIAPETLEMQAQVAESADRDALARNLRRAAELIQVPDEEVLDVYNALRPYRSTKAELYAIADGLETKYGCTINAAFIREAADVYEKRGRLKADA

>PFR_JS22-1_1384
MDEKTLRTIIEEVVKEFAAAGDAQGTGAGSATAMATAPSLTEASGDQLEITEEGPAPRGTNPREVVIALAPAFGGRITKTIIGIPHAEVLREICAGIEEEGLTYRFIRVFRTADVGFIAHDAAVLSGSGVGIGIQSRGTTVIHQKDLPPLSNLELFSQSPLIDLATFRAIGKNAARYAKGESPDPVPVVNDQMARPKYQAIAALLHIKETQMCDLNKKTQALRVEYR

>PFR_JS22-1_1385
MKSKRFEALDARPVNQDGYVTEWPEVGLIAMNGPNDPTPSIRIEDGVVVELDGKQRADFDMIDTFIADYGIRLDKAEEVCKTDSRELARQMMDFHVPRAEVVQLTTAMTPAKITEVVGTMSVLEMMMAVTKMRARLFPANQAHVTNLKDNPVQIAADAAEGALRGFAEEETTVGIVRYAPFNAIANMVGSQVGRPGILTQCSVEEATELALGMRGFTAYAETVSVYGTEQVFMDGDDTPWSKSFLASCYASRGLKMRFTSGTGSEVQMGAAEGKSMLYLEARCLYITKGAGSQGIQNGSVSCIGVPAAVPSGIRAVLAENLIAMSLDLECASSNDQTFTHSDLRRVARSLMQFVPGTDFICSGYSATPNYDNMFAGSNWDADDYDDWLIIQRDLKIDGGLQPVVEEDVVRVRNKAARVIQAIFRELGLTEVTDEEVEAATYARGSKDMPARNVVEDLKAAEDLMKRGITGVDIVLALDRAGFEDVANSVYNMLKQRVAGDYLHTSAILNEDFQVISAVNYPNDYRGPGTGYQMTDERWDKLKTIRQAISPESI

>PFR_JS22-1_1386
MANEQLVDQIMSAVMAKIGNEPASAAPRAAAPSVPASIGRPEATEFVGTSALGDTIGLVIPNVDPQIHALMKIDPKYRSIGIIGDRTGAGPHIFAADEGVKATNTEVVSIELARDTKGGAGHGSLIILGAEDVSDARRAVEVTLGELDRTFGDVYGNDAGHLEFQYTARASHALNKAFGAPVGKAFGITVGAPAAIGVVLADTAVKASTIDVIGYSSPAHGTSYSNEVISCFTGDSGAVRQAIIAARATGLELLGAMGDVPTSTTTPYI

>PFR_JS22-1_1387
MQDALGMVETKGFVPAVEAADAMVKSANVTLIGSQRVGSGLVTVLVRGDVGAVKAATDAGAVAAQNVGELVSVHVIPRPHADVEKILPSFADQK

>PFR_JS22-1_1388
MSDKQRIIQEFVPGKQVTLAHVVANPDPSLYPKIGLPAGTEALGIMTITPSEASIIAADVATKASAVSLGFVDRFSGSLVVLGQLSDVESAIENVVAVLCDELGFARPPITRS

>PFR_JS22-1_1389
MKKILLVGSVGAGKTTLLQCLHEREPSYAKTETIYTDGTIVDTPGEYLEMPFYKHALRMASFEVDLVVLLASAQVSEAKFPPGFTSFFMPPSVGVVTKIDLADQVAIDIATSHLQMAGVTQIFPVSAMTGAGIDRLAARLA

>PFR_JS22-1_1390
MDIDLEVFEPVDTTPVGRRILDAAAELFRDHGITATGVDSIVEHAGTTKRTLYQRYGSKDRLIVCYLQQRAHAWQGELLETLTDASPAQALDIVYQHTAQWATSTPRGCAFVNAWSEIGASDHEATKFIRAEKAWMLALFTQIASGDENTGTLLHLLHEGAQVTASIQGDPRVFAQACNASQELLVRR

>PFR_JS22-1_1391
MCVAFVVAWSSGFVGATLADRTGVGTWSLLAWRYLATALVLLVGCLLVPSLRHSFCALGRREVLQQVILSVLSHVLFLGGVFLAAEEGLDAGLSALVCALQPLIVTVAGRIFFGDRVRIVQWVGLLIALGGVSLSVGGISAAGVGSVGLVAMSLLGLSTASLLERSWNPQVPVTVSLTVQVSVAAVIFSGVALVTGGLALQVTGALVLAISWLVLLSGLGGYATFIWCLRHVGATTTSTLLYLTAPVTMLWAWCMFGQQPSPLQWIGLAVVLSGVGLATRRTNHREQGTA

>PFR_JS22-1_1392
MTHTNAALTPRHRLIVARLVVEEDWPVSEVAARFQVSWPTVKRWADRYRAGQSM

>PFR_JS22-1_1393
MLHVDVKKLGNIPDGGGWRYVGRRQGEKNRAATPDKAKNKWRDPLMGKAYVHTAIDDHSRVAYAEVHDDETAFTAAAVLVRAVEWFNACGVTVERVLSDNGGAYRSHLWRDTCAELGIRHKRTRPYRPQTNGKIERFRRTLSDGWAYARCYTSETERRGELEGWLHNYNHHRPHTACGNQPPFSRLTNVSGQYT

>PFR_JS22-1_1394
MKQFQLATSLACGPDALTALDRLGGRRVLVITDAFMASSALMDTVRGHLGSAEITVFDQVQPNPDVQAVARGLRAFLDCAPEALLALGGGSPIDTAKAVRKIALEQGQPLSAGFYVVPTTSGTGSEVSSFAVVTDPEHDAKLPMTSPDMVADVAILDPDAVRTCPPTLTADSGMDALSHAVEAYVALDHNDITDALAEKALRLISANLVASFRDGNDLAAREHQQNAATMAGIAFENSGLGIVHGLSHAIGGSFHVAHGRLNGILMPHVIGFNAGELGFGAATLSPIAERYAQLAAAIGIDAATRRGLVTGLVDFITAIRRDLDMPASLTDAGVDRAAFRAAIPQLSQTALRDFCTSGNPRPVTLMSSPGCWPTPSSPRRPVRSTPEGAGRVPGLGVLTGDVGQS

>PFR_JS22-1_1395
MTLKRMVDLMDVAALAKTLEDFSEATGFATVAVDAQGVPVTEMCAFTDFCRAIRQDPVRRTLCHGCDAYGGLQSLAHGTTQIYRCHAGLVDFSVPITSQNSYVGAILCGQARVPELEQPDFLMGDSPWRGDPTLEQYYEQVPVVGRRRVQAAAQTLLGLRAGVEGYSGKLRLFLSDDQASGGVAQSQARGAALRGLSVVPTDIVAGFTPNPNTSSARAADDEADSDAPASDSADILRTALLAEDFAGTVAEISVQLQAAFDPVPGTDVLEGVQALDEALLAVARDIAPRLAPHLEETIVRHRRGAGAHPGRYTSQLHAERLATLILDEVLRTRPQRQHNLRDLINDIARNPARALSLTEAARKLHWSPGHLSKLFKSVTGDTFVSYVMSRRLERAELMLASTQMPVGEIATTLDFSQVNYFSRVFRSRTGMSPSEYRRQHSSFDRRPLHEAIPTGHFSRLRA

>PFR_JS22-1_1396
MPTYRDEAVVLRTHKLGEADRIITLLSRTHGKVRAVARGVRRTSSKFGGRLEPCNHVDVQFAVGRSLDIVTQVECLHPYGDPLTRDYVLYTTGETMLEVADRLVAVENEPSLQQYRLLVGALRVLGQGTSDGPRPATMVLDSYLLRSLAVAGYAPVLDSCAKCGVMGQQEWFSPSIGGMVCSGCRPPGSARPEPESWQFLGALMSGDWPATRTVGEGTQREVSGLIAAFSSWHLEHQLRSLPLIPRG

>PFR_JS22-1_1397
MDGNGRWATQRGLPRTKGHEAGESALFDVIAGAIEMGIDCLSVYAFSTENWKRSPEEVRFLMGFSRSVIHRRLDELDAWGVRVRWAGRRPRLWRSVITELEQAEERTRHNDTLQMQFCVNYGGRAEIVDAARKIAAAAAAGRLDPAHLTEKSFHRYLDEPDMPDVDLFVRSSGEQRLSNFLIWQSAYAELVFSQKLWPDWDRRDLWDAVNRYVHRDRRYGGTDSSTQGA

>PFR_JS22-1_1398
MDIAIKRVYEPASPDDGYRALVDRLWPRGESKVRAELNEWCKDVAPSTDLRKWFNHQEELFGEFTTRYRAELDASSEPAALLKRAEESGKSKLTLVYGAKDQKDNQAVVLRDYLNGLQSK