BMC type: PDU1D


Organism: Propionibacterium freudenreichii. Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

           PFCIRM512_10735 (fasta)
                PFCIRM512_10740 (fasta)
                         PFCIRM512_10745 (fasta)
                               PFCIRM512_10750 (fasta)
                                    PFCIRM512_10755 (fasta)
                                          PFCIRM512_10760 (fasta)
                                             PFCIRM512_10765 (fasta)
                                                 PFCIRM512_10770 (fasta)
                                                          PFCIRM512_10775 (fasta) HMMalddh_1_eutpdugrm GRM3C (details)
                                                                 PFCIRM512_10780 (fasta) HMM01923cobtr_1_pdu PDU1D (details)
                                                                  PFCIRM512_10785 (fasta) P_stone PDU1D (details)
                                                                       PFCIRM512_10790 (fasta) HMM02441_04 PDU1D (details)
                                                                            PFCIRM512_10795 (fasta) HMM06723EutJMreB_1_grm PDU1D (details)
                                                                             PFCIRM512_10800 (fasta) H_tan PDU1D (details)
                                                                                PFCIRM512_10805 (fasta) H_tangerine PDU1D (details)
                                                                                  PFCIRM512_10810 (fasta) HMMpropdeh3_2_pdusml PDU1D (details)
                                                                                             PFCIRM512_10815 (fasta) HMM08841dhact_1_pdu PDU1D (details)
                                                                                                PFCIRM512_10820 (fasta) HMMpropdeh2_1_pdu PDU1D (details)
                                                                                                    PFCIRM512_10825 (fasta) HMMpropdeh3_1_pdu PDU1D (details)
                                                                                                              PFCIRM512_10830 (fasta) HMMpropdeh1_1_pdu PDU1D (details)
                                                                                                                   PFCIRM512_10835 (fasta) Tsp_turquoiseBlue PDU1D (details)
                                                                                                                    PFCIRM512_10840 (fasta) H_royalBlue PDU1D (details)
                                                                                                                      PFCIRM512_10845 (fasta) Hp_euts_violetPink PDU1D (details)
                                                                                                                        PFCIRM512_10850 (fasta) HMM10662PduV_1_mix PDU1D (details)
                                                                                                                           PFCIRM512_10855 (fasta)
                                                                                                                                PFCIRM512_10860 (fasta)
                                                                                                                                 PFCIRM512_10875 (fasta)
                                                                                                                                        PFCIRM512_10880 (fasta) HMM00465alcdh_3_mix PDU1D (details)
                                                                                                                                               PFCIRM512_10885 (fasta) HMMreg12833_2_PDU PDU1D (details)
                                                                                                                                                PFCIRM512_10890 (fasta) HMMreg12833_2_PDU PDU1D (details)
                                                                                                                                                    PFCIRM512_10895 (fasta)
                                                                                                                                                         PFCIRM512_10900 (fasta)
                                                                                                                                                           PFCIRM512_10905 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_royalBlue
       H_tan
       H_tangerine

BMC-Hp(map on tree)

       Hp_euts_violetPink

BMC-P(map on tree)

       P_stone

BMC-Tsp(map on tree)

       Tsp_turquoiseBlue

(complete list of loci)

Protein sequences:

>PFCIRM512_10735
MGTSTQGAELAHGTPVWHDDATVVVVGSGAAGLMAAVELAGAGVDTMVLSRGRVTDSSTDWAQGGLAAVWSDQDSPDLHVSDTLTAGAGLCAEDSVRILVNEAPAALRRLIELGAVFDKDRTGGIDLHLEGGHHARRILHAGGDQSGHEVERTLVQCVADAVDGPLSVREGVRAVDLLVDAQGRCNGVRALDAQGRLGEVRAASVILATGGIGQLWTTSTNPPVATGDGLAMAWRAGAVLSDLEFMQFHPTILVVPADHRIPGDRGVLISEAVRGEGAFLIDHRGTRVMAGLHPLADLAPRDVVSAAEHAHMARTGERNLFLDATAFGAQAWEHKFPSILAMCRERGVDPVTEPIPVRPGAHYHCGGVRADMDGRTSIEGLFAIGEVACTGVQGANRLASNSLTEGLTMGRRVARLIATGKGVPTGPASGGDAARRQLPPQDPALFDAVRRTMTAAGSVLRDARGLDNARRALADRATPAGTLTNATLDATNAAQVAELLLAAAALRRESRGSHRRSDFTERSAQWQCHQDWSLDAHGLPEMTIRTIGHEQAPERSAA

>PFCIRM512_10740
MSPDVAVGQQRIDPGDVPGALRDAGLEPEDVGATIDRALDEDLAYGPDVTTEAIFDPADRATAWVASRQDGCLAGLPVAAAAIHRLAARQGTTARVTLLAHDGQRVHPGDRVLLIEASLRCLLTSERTMLNLLGQLSGVATQTARWADALAGSRAVIRDTRKTVPGLRTLQKYAVRCGGGQNHRMGLGDAALIKDNHVAAAGRIAQAIRAVQSHAPQVACEVECDTLDQVREAVGAGAHLVLLDNMAPDVMRRAVAICRPAGVRTEASGGLLLADAPAVAPTGVDYVSVGALTHSSPVLDLGLDMD

>PFCIRM512_10745
MAESKLDKVINLCKRRGFVFPCGEIYGGTKAAWDYGPLGVELKENIKKQWWRYMVTSRGDIVGLDSSVILPREVWVASGHVAVFNDPLVECQNCHKRFRADQLQEEYAFRKGIADADTVKLEDIPCPNCGVRGKFTEPRDFNMMLETYLGPIHDEAGLHYLRPETAQGIFINFKNVLTSTRMKPPFGVGQTGKSFRNEITPGNFIFRTREFEQMEMEFFVEPGTDEEWHQYWIDHRKAWYVGLGIEEDNLRLFEHPKEKLSHYSKRTVDIEYKFGFAGSDWGELEGIANRTDFDLKTHTEHSGTDLSYFDQAQNKHYIPYVIEPAAGLTRSFMAFMVDAYTEDEAPNAKGGVDKRTVLKIDPRLAPVKVAVLPLSRNEKLSPKARGLADELRQYWNVDFDDAQAIGKRYRRQDEIGTPYCVTIDFDTLDDDAVTIRERDSMAQERVPLSGVSEYLSSRLLGC

>PFCIRM512_10750
MNFTPRTRLSRWAVGLVLGALIVPLAACSTPSSSSSASAGKLNVVTAFYPFEFVSQRVAGDHANVSSLTAPGAEPHDLELTPKQTASIGAADLVVYQTGFQSAVDQAIKQSTPKHAVDVASIVSLQAPQGTVDLGDGDDDQYTKDPHEWLDPTNVETITNAVRDQLSTIDPSHKGDYEANAAKLVADLQGVDNSYKTSLSTCTQKTFITTHAAFGYMARRYGLNQIGISGLSPDEEPSPTRIAKVQDLAKQNNVTTIFYETLISPKVAESIAGDLHLKTDVLDPLEGITDKSRGSDYLQVMDSNLTALKTANGCS

>PFCIRM512_10755
MPDNQPVISCEDLSVTLEGHQILFDIDAEVHCNETVALLGANGSGKTTLVRALLGLIPISGGTAELFGTPLSQFKDWNRLGYVPQRGHSQVANATVREVVATGRLANRHFFSRMHKQDRDAVDTALRRVELSHRAGDPLSVLSGGQQQRALIARALASEAELLILDEPLAALDIPTQESLARLFERLKSDGLSMLVILHELGPMERLIDRSIMIQLGHKIYDGPLMAGPAIDSGHHHPAPIGADQAVISGPEMRRPHLTKEA

>PFCIRM512_10760
MSVFALAFMQRALIAALLSGFMSPAVGTYIVQRKLSLLGDGLGHVAIAGVGLALLTGWAPTPVAIVICLVGAVSIELLRQSGRAPADVGLAILFYGGLATGVLLAGISGQGTGVLSQYLFGSLTTVSMSDVALVAVMAAIVIILSLGLSPQLFAVCADEEFARSQGLPVRALEICIVVMASVTVAVSMRTVGLLLVSALMVVPVAAANNLVTGFYRSMFTAIGIGVVVSFIGVTGSYYWNTASGATIVVSAIAVFALSWPVGSLLNRRRLARSQRIPDPETARDNAAEVAAHRPVDPSELVGDDGNHPRIQHGDHVDYLHGNHRHAPHGDHFDEH

>PFCIRM512_10765
MPHMEIISMNTERDPGPEQETTPAAPRSTMGREEAPRPRPRQTKQRQLISRMLENQSRFRTAQQLHADLRAAGDSASLATVYRVLQSLAEHGEVDTWRTPGGELAFRHCSPTHHHHLICYRCGRTVEIDAGPAEQWASRVAAENGFIHAEHQVEVYGLCPQCAAEIGEGH

>PFCIRM512_10770
MSTSHGASPGSLIPLAPGPSVPRTFAPAPRLLPRSVRVAGSPVTILTDRAGTPTPLERTPRPFTRAELEVAWVQWSALDPRLADTVLVLAHTALRWDEARALTVDDLVPHAHQIIVRAHCPGRVRRPLAPALHRRVPVSLRIRQALRRLASTPGPRGLVFTDPDGAPLRRATVRRVLDWYHTAPGHGLADLPATAAQLWADDGTPRAVVAEWSGRPAWSSRPRG

>PFCIRM512_10775
MTISPELIQQVVRETVREVISRQDSGTDAPSGTDGIFTDMNSAVDAADVAWRQYMDCSLRDRNRFIQAIRDVASEPDNLEYMATATVEETGMGNVPHKILKNRYAALYTPGTEDIITEAWSGDDGLTTVEFSPFGVIGAITPTTNPTETVINNTIGMLAAGNAVVFSPHPRAKKITLWLVRKINRALAAAGAPANLVVTVEEPSIDNTNAMMSHEKVRMLVATGGPGIVKAVLSSGKKAIGAGAGNPPAVVDDTADIAKAARDIVDGASFDNNLPCTAEKEVLAVDSIADLLKFEMLKHGCFELKDRAVMDKLAALVTKGQHANAAYVGKPAAQLASEVGLSAPKDTRLLICEVPFDHPFVQVELMMPILPIVRMPDVDTAIDKAVEVEHGNRHTAVMHSSNVNALTKMGKLIQTTIFVKNGPSYNGIGIDGEGFPTFTIAGPTGEGLTSARCFARKRRCVLKSGLNIR

>PFCIRM512_10780
MTMAAIYTRTGDKGTTGLFGGTRVPKQDPTVEAYGTLDEANATIGEAKARVEDPDMRAALQHIQQRLFVAAAELASDEAGRAVIANTISPDDVADLERLIDDSMAETGPQRNFVVPGRDLVSAALHRARTVTRRAERRMLTAAESRPVRPELIRYVNRLSDALYSLARVAEHRFDVARLEGLVRSVVEKHLATQSPQPRVAWSPASGFVPADVSTTADPATRFGLARYDLDVLQAMAAAAQSRGAELGVPIVFAGVDAGGHLMLLHRMEDSLLGSLDLASNKAFTAAAFKQPTADLSEASLPGAELHGIQNSNDGRVVVFGGGLPVFVDGVLCGGIGVSGGTVDQDVTIASFAMSRAKEASRS

>PFCIRM512_10785
MFLAKVRGTVVSTSKDERLVGFKLMLIEQIGLQQEPVGRPEIAVDTVGAGTGSIVIVTKGSSARFAADRKDAPIDSTIVGIVDTVEIGPA

>PFCIRM512_10790
MNPDQLRAIIRQTLVELLAPAPRRALVVFTGGLLGFDECLGGLRALADEGVALDVVQTPSARRILDQHKIGALGLPQVDDHLVANHQMLIAPTLTANVAAKVSHGIADCLASNLFSEFIMSNRLVVASSTAVSPDEAPKRSIYPEMPSGYAELLRANLTALTSFGVRLARSQALARTALAAFDRRDAAHKDALIAQGIPAQALAACAAPAIPAPAPRPHGGGVSHRGTRVTDTRREPAPRGPVTGAPSTLKLISQGVVQKLDPGSCLAIRPDTKVTAAARDMAASRNIQITVVV

>PFCIRM512_10795
MAMTGMVVTTHVELPEQAIMRFAEQVRTGAIDEPTGQMRLGFDLGTANIVVAVVDAANHPIAGGWVHSTVVRDGVVVDWAGATSAVRALRADVEQRLGHEFTKASISIPPGISDGDIQVFANVIGAAGLDLDEVVDEPVAAARAMGITDGAVIDVGAGTTGVSILEDGKVVLSVDEATGGHHMTLVLAGSNNIDYDQAEAMKKDPQYREQVLGTIRPTLDKMATIAAQALGSRDVPAVYLVGGSSSFESAPAIFEARLHRPVVRPAQPLFITPLGIPMPAQEESR

>PFCIRM512_10800
MREALGLIETKGYVGSVEAADAMVKAANVVLVGYQKVGAGLVTVMVRGDVGAVKAAVDAGAAAAAAVGEEVLSRHVIPRPAADVEKLLPKQA

>PFCIRM512_10805
MQLTQALGTIEVLGLPAAITAADVACKAADVRLVGYETTDGMGMVTVKITGQVSAVQSAIAAARAAASQITSVFAESVIPRPNDQIDPVVLTPVTVGLGASPAARPGGGTSPEAATPEQMAAAERALDPADPPRDAEPAAPTTDPAPAPDPAPAGPVADDPAATAPAVPSQPKISPSQERPDKGTAGPSRNRRKAPQAGREAGKK

>PFCIRM512_10810
MNTDKPTINMRVSDQITADQIADICFGMEEEGVPSTVTWQASINPLELAHEASVESRLGVGIGVALSYAVITTEKLPAERPYIAVNLSRDAARNRAIGANAARLVKRIPLLPMN

>PFCIRM512_10815
MTLIAGVDIGNATTEVALADVAAGAPPRFLASAIVSTTGIKGTQQNTQGVFQAITQALQTAGRELEQLDLIRINEAAPVIGDVAMETISETIITESTMIGHNPSTPGGLGVGVGTTIRLDDLGQASAGEPYIVVADHTHGFLDVAARINEAAARVNITGAILQLDDGVLVDNRLTAKIPIVDEVKLIDKVPIGMPAAIEVAEVGRIVETLSNPYGIATMFGLSPDETASVVPMARSLVGNRSAVVIKTPAGDVTERHIPAGSLRFLGDRTAEVDVDRGAQEIMHAAESVGTIRDIKGEPGTNIGGMMEKVRVTMGRLTDRDPAGIEVTDLLAVDTNVPQKVTGGVAGEFSLEAAVGIAVMVKADRLQMQRIAEEMTEQFAVRVEVGGVEADMAIRGALTTPGTSVPIAILDMGAGSTDASVLREGQPARSVHLAGAGNMVTLLIKMELGLDSEEDAENIKRYPLARVETLFSIRHEDGTVQFFDEPLAPELFARTVVLHPDGMIPLPLRHPLEVIRQVRIHAKQRVFVTNAMRALAAVSPTNNVRDIAHVVLVGGSALDFEIPQFVTHALAEFRVVAGRANTRGTEGPRNAVATGLVLAWEAGR

>PFCIRM512_10820
MDSEELIRQIMGEVMANLNQDNVAFDKLPAAAPSTTGAAHRVDKSSYPLGEKVPEQIKSASGRALSDFTFDKVKSGELTAKDFRIAPETLEMQAQVAESADRDALARNLRRAAELIQVPDEEVLDVYNALRPYRSTKAELYAIADGLETKYGCTINAAFIREAADVYEKRGRLKADA

>PFCIRM512_10825
MTMDEKTLRTIIEEVVKEFAAAGDAQGTGAGSATAMATAPSLTEASGDQLEITEEGPAPRGTNPREVVIALAPAFGGRITKTIIGIPHAEVLREICAGIEEEGLTYRFIRVFRTADVGFIAHDAAVLSGSGVGIGIQSRGTTVIHQKDLPPLSNLELFSQSPLIDLATFRAIGKNAARYAKGESPDPVPVVNDQMARPKYQAIAALLHIKETQMCDLNKKTQALRVEYR

>PFCIRM512_10830
MKSKRFEALDARPVNQDGYVTEWPEVGLIAMNGPNDPTPSIRIEDGVVVELDGKQRADFDMIDTFIADYGIRLDKAEEVCKTDSRELARQMMDFHVPRAEVVQLTTAMTPAKITEVVGTMSVLEMMMAVTKMRARLFPANQAHVTNLKDNPVQIAADAAEGALRGFAEEETTVGIVRYAPFNAIANMVGSQVGRPGILTQCSVEEATELALGMRGFTAYAETVSVYGTEQVFMDGDDTPWSKSFLASCYASRGLKMRFTSGTGSEVQMGAAEGKSMLYLEARCLYITKGAGSQGIQNGSVSCIGVPAAVPSGIRAVLAENLIAMSLDLECASSNDQTFTHSDLRRVARSLMQFVPGTDFICSGYSATPNYDNMFAGSNWDADDYDDWLIIQRDLKIDGGLQPVVEEDVVRVRNKAARVIQAIFRELGLTEVTDEEVEAATYARGSKDMPARNVVEDLKAAEDLMKRGITGVDIVLALDRAGFEDVANSVYNMLKQRVAGDYLHTSAILNEDFQVISAVNYPNDYRGPGTGYQMTDERWDKLKTIRQAISPESI

>PFCIRM512_10835
MANEQLVDQIMSAVMAKIGNEPASAAPRAAAPSVPASIGRPEATEFVGTSALGDTIGLVIPNVDPQIHALMKIDPKYRSIGIIGDRTGAGPHIFAADEGVKATNTEVVSIELARDTKGGAGHGSLIILGAEDVSDARRAVEVTLGELDRTFGDVYGNDAGHLEFQYTARASHALNKAFGAPVGKAFGITVGAPAAIGVVLADTAVKASTIDVIGYSSPAHGTSYSNEVISCFTGDSGAVRQAIIAARATGLELLGAMGDVPTSTTTPYI

>PFCIRM512_10840
MQDALGMVETKGFVPAVEAADAMVKSANVTLIGSQRVGSGLVTVLVRGDVGAVKAATDAGAVAAQNVGELVSVHVIPRPHADVEKILPSFADQK

>PFCIRM512_10845
MSDKQRIIQEFVPGKQVTLAHVVANPDPGLYPKIGLPAGTEALGIMTITPSEASIIAADVATKASAVSLGFVDRFSGSLVVLGQLSDVESAIENVVAVLCDELGFARPPITRS

>PFCIRM512_10850
MKKILLVGSVGAGKTTLLQCLHEREPSYAKTETIYTDGTIVDTPGEYLEMPFYKHALRMASFEVDLVVLLASAQVSEAKFPPGFTSFFMPPSVGVVTKIDLADQVAIDIATSHLQMAGVTQIFPVSAMTGAGIDRLAARLA

>PFCIRM512_10855
MDIDLEVFEPVDTTPVGRRILDAAAELFRDHGITATGVDSIVEHAGTTKRTLYQRYGSKDRLIVCYLQQRAHAWQGELLETLTDASPAQALDIVYQHTAQWATSTPRGCAFVNAWSEIGASDHEATKFIRAEKAWMLALFTQIASGDENTGTLLHLLHEGAQVTASIQGDPRVFAQACNASQELLVRR

>PFCIRM512_10860
MAWSSGFVGATLADRTGVGTWSLLAWRYLATALVLLVGCLLVPSLRHSFCALGRREVLQQVILSVLSHVLFLGGVFLAAEEGLDAGLSALVCALQPLIVTVAGRIFFGDRVRIVQWVGLLIALGGVSLSVGGISAAGVGSVGLVAMSLLGLSTASLLERSWNPQVPVTVSLTVQVSVAAVIFSGVALVTGGLALQVTGALVLAISWLVLLSGLGGYATFIWCLRHVGATTTSTLLYLTAPVTMLWAWCMFGQQPSPLQWIGLAVVLSGVGLATRRTNHREQGTA

>PFCIRM512_10875
MRQPATLLTIDQRLRSVHLVPAPSRRPPGWTVRVGGD

>PFCIRM512_10880
MKQFQLATSLACGPDALTALDRLGGRRVLVITDAFMASSALMDTVRGHLGSAEITVFDQVQPNPDVQAVARGLRAFLDCAPEALLALGGGSPIDTAKAVRKIALEQGQPLSAGFYVVPTTSGTGSEVSSFAVVTDPEHDAKLPMTSPDMVADVAILDPDAVRTCPPTLTADSGMDALSHAVEAYVALDHNDITDALAEKALRLISANLVASFRDGNDLAAGEHQQNAATMAGIAFENSGLGIVHGLSHAIGGSFHVAHGRLNGILMPHVIGFNAGELGFGAATLSPIAERYAQLAAAIGIDAATRRGLVTGLVDFITAIRRDLDMPASLTDAGVDRAAFRAAIPQLSQTALRDFCTSGNPRPVTLMSSPGCWPTPSSPRRPVRSTPEGAGRVPGLGVLTGDVGQS

>PFCIRM512_10885
MRRTLCHGCDAYGGLQSLAHGTTQIYRCHAGLVDFSVPITSQNSYVGAILCGQDRVPELEQPDFLMGDSPWRGDPTLEQYYEQVPVVGRRRVQAAAQTLLGLRAGVEGYSGKLRLFLSDDQASGGVAQSQARGAALRGLSVVPTDIVAGFTPNPNTSSARAADDEADSDAPASDSADILRTALLAEDFAGTVAEISVQLQAAFDPVPSTDVLEGVQALDEALLAVARDIAPRLAPHLEETIVRHRRGAGAHPGRYTSQLHAERLATLILDEVLRTRPQRQHNLRDLINDIARNPARALSLTEAARKLHWSPGHLSKLFKSVTGDTFVSYVMSRRLERAELMLASPQMPVGEIATTLDFSQVNYFSRVFRSRTGMSPSEYRRQHSSFDRRPLHEAIPTGHFSRLRA

>PFCIRM512_10890
MVDLMDVAALAKTLEDFSEATGFATVAVDAQGVPVTEMCAFTDFCRAIR

>PFCIRM512_10895
MPTYRDEAVVLRTHKLGEADRIITLLSRTHGKVRAVARGVRRTSSKFGGRLEPCNHVDVQFAVGRSLDIVTQVECLHPYGDPLTRDYVLYTTGETMLEVADRLVAVENEPSLQQYRLLVGALRVLGQGTNDGPRPATMVLDSYLLRSLAVAGYAPVLDSCAKCGVMGQQEWFSPSIGGMVCSGCRPPGSARPEPESWQLLGALMSGDWPATRTVGEGTQREVSGLIAAFSSWHLEHQLRSLPLIPRG

>PFCIRM512_10900
MATSTPHPAHRAPDPHPSGARPPALPAKALPRHVAVVMDGNGRWATQRGLPRTKGHEAGESALFDVIAGAIEMGIDCLSVYAFSTENWKRSPEEVRFLMGFSRSVIHRRLDELDAWGVRVRWAGRRPRLWRSVITELEHAEERTRHNDTLQMQFCVNYGGRAEIVDAARKIAAAAAAGRLDPAHLTEKSFHRYLDEPDMPDVDLFVRSSGEQRLSNFLIWQSAYAELVFSQKLWPDWDRRDLWDAVSRYVHRDRRYGGTDSATQGA

>PFCIRM512_10905
MDIEIKRVYEPASPDDGYRALVDRLWPRGESKVRAELDEWCKDAAPSTDLRKWFNHQEELFGEFTTRYRAELDASSEPAALLKRAEASGKSKLTLVYGAKDQKDNQAVVLRDYLNGLQSK