Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: PDU1D


Organism: Desulfotomaculum aquiferis. Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

      N752_16510 (fasta) HMMreg13556_3_MIC1 FRAG7 (details)
       N752_16515 (fasta)
               N752_16520 (fasta)
                  N752_16525 (fasta)
                    N752_16530 (fasta)
                      N752_16535 (fasta)
                          N752_16540 (fasta)
                              N752_16545 (fasta)
                               N752_16555 (fasta)
                                N752_16560 (fasta)
                                   N752_16565 (fasta)
                                        N752_16570 (fasta)
                                           N752_16575 (fasta) Ts_grape PDU1D (details)
                                            N752_16580 (fasta) HMMPduS_1_all PDU1D (details)
                                                 N752_16585 (fasta) HMMPduS_1_all PDU1D (details)
                                                  N752_16590 (fasta) HMMPduS_1_all PDU1D (details)
                                                      N752_16595 (fasta) HMMalddh_1_eutpdugrm PDU1D (details)
                                                           N752_16600 (fasta) HMMalddh_1_eutpdugrm PDU1D (details)
                                                               N752_16605 (fasta) HMM01923cobtr_1_pdu PDU1D (details)
                                                                N752_16610 (fasta) HMM01923cobtr_1_pdu PDU1D (details)
                                                                 N752_16615 (fasta) HMM02441_04 BUF1B (details)
                                                                   N752_16620 (fasta) HMM02441_04 PDU1D (details)
                                                                    N752_16625 (fasta)
                                                                       N752_16630 (fasta) HMMptac_3_eut2 EUT2D (details)
                                                                        N752_16635 (fasta) HMMptac_3_eut2 PDU1D (details)
                                                                           N752_16640 (fasta) H_fuchsia PDU1D (details)
                                                                            N752_16645 (fasta) H_pumpkin PDU1D (details)
                                                                             N752_16650 (fasta)
                                                                              N752_16655 (fasta)
                                                                               N752_16660 (fasta) HMM08841dhact_1_pdu PDU1D (details)
                                                                                N752_16665 (fasta) HMM08841dhact_1_pdu PDU1D (details)
                                                                                         N752_16670 (fasta) HMM08841dhact_1_pdu PDU1D (details)
                                                                                          N752_16675 (fasta) HMM08841dhact_1_pdu PDU1D (details)
                                                                                             N752_16680 (fasta) HMMpropdeh2_1_pdu PDU1D (details)
                                                                                               N752_16685 (fasta) HMMpropdeh3_1_pdu PDU1D (details)
                                                                                                N752_16690 (fasta) HMMpropdeh1_1_pdu PDU1D (details)
                                                                                                   N752_16695 (fasta) HMMpropdeh1_1_pdu PDU1D (details)
                                                                                                        N752_16700 (fasta) HMMpropdeh1_1_pdu PDU1D (details)
                                                                                                          N752_16705 (fasta) Tsp_pistachio PDU1D (details)
                                                                                                            N752_16710 (fasta) Tsp_lichen PDU1D (details)
                                                                                                             N752_16715 (fasta) H_robinEggBlue PDU1D (details)
                                                                                                                N752_16720 (fasta) HMM10662PduV_1_mix PDU1D (details)
                                                                                                                 N752_16725 (fasta) Hp_euts_fadedPurple EUT2B (details)
                                                                                                                  N752_16730 (fasta)
                                                                                                                        N752_16735 (fasta) HMM00465alcdh_3_mix PDU1D (details)
                                                                                                                             N752_16740 (fasta) HMM06723EutJMreB_1_grm BUF1 (details)
                                                                                                                                  N752_16745 (fasta)
                                                                                                                                     N752_16750 (fasta)
                                                                                                                                      N752_16755 (fasta)
                                                                                                                                        N752_16760 (fasta)
                                                                                                                                          N752_16765 (fasta)
                                                                                                                                           N752_16770 (fasta)
                                                                                                                                            N752_16775 (fasta)
                                                                                                                                             N752_16780 (fasta)
                                                                                                                                                N752_16785 (fasta)
                                                                                                                                                 N752_16790 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_robinEggBlue
       H_pumpkin
       H_fuchsia

BMC-Hp(map on tree)

       Hp_euts_fadedPurple

BMC-Ts(map on tree)

       Ts_grape

BMC-Tsp(map on tree)

       Tsp_lichen
       Tsp_pistachio

(complete list of loci)

Protein sequences:

>N752_16510
MAGKVWHSGKPLAVNDYSAWSGRSSRVSDLFRETVAFPLKSGNQVVGXFGLAYLEKGQRIGGQEMKLLESFSQLASIALENARLYTASQQEVAERIKAEEVIKYQAQHDYLTDLPNRLLFNDRLFISLAHAERKNKSLGVLFLDIDCFKLVNDTMGHDVGDQLLKSIAKRVSDTLEDSDTIARIGGDEFTILLSDLDRQEDAAKVAEKIIHSLEEPFVLDGREFYITTSIGIAVYPSDGLDVKTLLKHADIAMYQAKNQGRNNYQFLHLQ

>N752_16515
MYETTLDLINRLDIDDLLAAILKRACSLLGTEHGLLYLINDQKDELSLHLGTGYIKTILGLP

>N752_16520
MKIANRFLAMMIILGLMIIGGLFWTTHYVIIPWHIETMSQKARELASYIEKTTPLLSEAQMQKHLTQIQGEQADLSYILLVDRNGKALFHSDPYRVGMVFDDQGTLAAAREGKTVEQIYIRDADNPQSNFHGERILDILVPYYNNTNSLAGAVNVGLSLKSIDLATKRYYTIISINAFLFLSFLIFLTYKHVKDVISPLSSIAEMARRFGEGNPDHTIRINRNDEIGILAAEFNKMSQNISNQILERNRTELELRASYEELTATNEELVASNEELIAVEEELKLSYEEINKSHTKISNLLESIEDGFCSLDSNFKITYLNSEAEMLLHISKDEILVREWWAAFSDIKSLSVFSELQRVLEEKSSAQFETYNNIICKWLEFRAYLPLKVCLFIFMTLVLGSIQKSN

>N752_16525
MLSPSLEDYLEEIYRISQSGETIRVTDIAACLNVSLPSVTRALQKLDECNYINYRRYREIVLTNKGKELGHFLVERNRIIREFLQLLGSQCDFEAEAEAMEHYLSVPTITAITKFVKFSKHNPVWLEEYKGFCQIADKENDRGKLTRPDSKV

>N752_16530
MGLDGFILMAFILGLPANEIVLPILIMSYLAVGSMTELESIRDLYNLFVVQHGWTWLTAVSMMLFTLLHYPCGTTLLTIQKESGSIKWTILAALIPLAIGCAVCILVAQTARIMAGSKPLNQAG

>N752_16535
MLTNVFVPCNGRFPTLIALSGILVFGMGGTLGATAIVVGIVLLGITVTLAVSWSLSKTLLRGIPSSFTLELPPYRKPQIGNIIVRSIFDRTLFVLKRAIIVAAPAGVIIWLMANIYVGEISILAIVPTG

>N752_16540
MSQVFPTRLSAILTEIEQLHPHGNLQLNDSIVNSIYNSAESIAQQVVNQNEQPRTDWDKRIDDILTSRVFGFPSMLLLLGMIFWMTVAGANVPSAMLADTLFWGQDRLTELCNVLHAPAWFHGLFIEGVYSTLAWVISVMLPPMAIFFPCFTLLEDLGYLPRVAFNLDRLFKKAGAHGKQSLTMSMGFGCNAAGL

>N752_16545
MIALAGNPNTGKSTVFNALTGLNQHTGNWPGKTVLRAEGKYINQGYVYNLVDLPGTYSLLANSVEEQVARDYLCFGRPDATVIVVDATCLERNLNLVLQVLEITSKVVVCVNLIDEARRKNITVNTEALEKILGVPVVATAARDRIGLNELINAISNVANDRLVTNPYVVRYTEQIEAAISKIEPIIKELVGEKLNSRWLALRLLDKDQTIITKLEELYPQRDSLVTKVGGELWA

>N752_16555
MKNSFRRFEGNVMALYDLPIGKTAVVDSIEAEGLARRRMLDLGLIPGTKIEALRVSPSGDPKAFKIRGAVIAFREEESTQIMVSYKED

>N752_16560
MKGRAEGQFFPDETNQAEFAAIVNRCLDTVSLAHSYEKQLEPSAE

>N752_16565
MKNKLVAILLVLFLIAPSLSFANTPFTDTTEHWASKDIELAFQHGLLKGVGEDRFNPEGTLTRAELAVCLDRIFDFNFSAMLFLKEPVLTDYFDDVQESEWYSQSILESAVFNIFDIQDRKFKPGEPVTRLEVAEAIAKSFEAKSLSVATILLWPHFKDIETTNTLAFIHNTGI

>N752_16570
MFGGLEIVAAFGGGVFGAAVGALPAFIMTGILVLAGFTDMAFGPWFGPHVAFAGGVAAAAFAAKNDLESGKDILTPLIKFNDGSILLVGGIFGAIGMAVQQFFAGINTPTDTVALTVAISGIAARLIFGEKKLFHGYSMPDGKTGLSLLVLGLGVGLISSYGSIATDNAVLGFGIAATSLIFVQIMGVGPVTHHIALPAALAAMAAGNIWIGGLFGIIGALLGDFFTKTMNEGNTHVDPPAFVIALLTLIVVLFM

>N752_16575
MKRAIGLIETKNIIKGISVADAMLKSANVDLIMAHSVCPGKYFIMVGGDVGAVQNAVRSGKATGGNENIVDDIVLSNIHPDVFHALSGCSEVKEIKSLGVIESYSVASAILAADTAVKSATVQLIEVRLARGMGGKSLVTLSGEVGAVTAAVRAGSNAIQDSGFLIGDLVIAAPHQGLHKALF

>N752_16580
MDKYEHKAPLNLEPVLTKNVKILLSQHIGAPAKPVVELGSMVNKGDLIAEIPEGSLGANLHASISGQVYNVEGWIGIQQGVNI

>N752_16585
MQDTLKQMDAQGIELFFIPDMYPAGDEHVLVHEVTGRIVPEGGIPLHVGVVVSNVQTLINIAQALEGQPVTDKYVTVTGEVGKPSTVKVPIGMLIDEILLLAGGTTVREYTVIDGGPMMGKLIQKDATIRKTTGGIIVLPQDHSLVVEKGLTWPVISNRAKSVCCNCRACTDVCPRNLLGHRLEPHRIMQAIGRGQINESEVLSKAFLCSECGACDTYGCSMGLSPRRVNAELKRQSPVQVLETPIMKNPKAPVLIVSSGEYQPSDYYIVWVWTSMNIRHP

>N752_16590
MREEIIAAVKAAGVVGAGGAGFPTHVKINANAEIVIVNGAECEPLLRADQHLMASESEKLIIGLKAVMLAQVPARVTLA

>N752_16595
MLGCSFDNNLPCIAEKEAIVLNCIADKLISNMQKHGGYLISGQDINKLMKVILTEKEENAAAGCTIKPKRTYMINKNFVGKDAKYILSKIGIDVPDTIRAIICETTEDHPFVLEELMMPVLPIIRVKNLDEAIELAISVEHGNRHTAIMHSRNVDNLTRYAKAIDTTIFVKNAPAYAGIGAGSEGYTSFTLAGPTGEGLTSARSFTRQRRCVLVDALSIV

>N752_16600
MVIDQSIISKITAEVLARVQEQNSSTSGQNGIFQTIDEATAAARQAHRQLRKLSLETREKLIQAMRDVSLENAVLLSEMAVKETGMGRVSDKILKNQLAASKTPGTEDLKTEAWTGDRGLTLVEMAPFGVIGSITPTTNPSETIINNGISMIAGGNSVVFSPHPTAKNTSLKTIGLLNEAIVKAGGPPNLLTAVAKPSLDSTNAMLKHPDINMLVATGGPAIVKIVMSSGKKPLVQVPAILPSL

>N752_16605
MEQQRIPDKHFVIPGGTPVSAALDLARTIVRRAERCVVKVRRLDHVHPPVALYLNRLSDLLFVLARCVEQEELVVKVTSNVMENLAGTNNVSGEIVNMMTLNKAMKMIQTAEAKAKEIEVPMVIAVVDCGGNLVAQHRMDGAILASISISLDKAYTAVSLKMPTEKAAKPASPGQSLYGLNTTNGGRLVIFGGGIPVFDKGVLIGGIGVSGGAVEDDITVAKAGLAGL

>N752_16610
MKVYTKTGDQGQTSLLSKQRVYKDDDRVHAYGTVDEASSAMGLAKSLTQKEWVVNIIHPIQVELISLAADLATEGTEDAGKYRISESHVQTLRA

>N752_16615
MPLKRQVLDAGTLKSALLSGNRTISVAKGTIVTPLAQDIAREYNAEIVFR

>N752_16620
MEMLGNDIKIITSQSPYPKEPLRQADVVIIPVLTQNTAAKVALTISDTMASYLIISALMLSKPVIAARDAAEPINRPQVELSKLKPAFREVLEGNLKKLSTYGIQLTSADNLSKVTKGFYFRSG

>N752_16625
MEHEKLVEIITTEVLRRLSSKDIPGHPQAGYSKKALVVFTGGTIGLKSGLRK

>N752_16630
MKQVGEYAAKETLTLVGPKGALRNVRVLGPVRKFTQVEISRTDGFNLGIVPPIRDSGKLEDTPGIVLVGPKGGVSLNKGVIVAARHIHMGVEDAHRYNVSDGDRVTIKINGPRGGSFDNVLVRVNPNFRLEFHIDTDEANAAALKNGDTVSIDIREQSCGA

>N752_16635
MEQQMIEQVVSQVLAEIYSREKQGQPVDGIPVGISNRHIHLSAEHIEQLFGKGYTLTPEKI

>N752_16640
MDLANDTADIDQVKEPKISQSHVCNLCGDPACPRKKVIPGFLVFITKIRRMSRMRGEALGLVETKGLVGAIEAADAMVKAANVILVGYEKIGSGLVTVMVRGDVGAVKAATDSGAAAAQRVGELISVHVIPRPHTDVERILPKVE

>N752_16645
MNIMDKNALGLIEVVGLAAGMEAADAAVKAANIELVGYELTKGGGMVVIKLSGDVGALRRLWMQVLPQPHGLIRFMLPMLSPALQVA

>N752_16650
MPGQGPVIDSEEADLYELVRKIVLKVLQESAEGQRE

>N752_16655
MRSDNKPTKPSIIICTAVLQGYEYKLRELRAGMEEEGIPYSLQRVEAVMQYPLPTRELIHLSLV

>N752_16660
MSDMVTDALAHYGIVCGRGNIRGCEGPRNAVATGLVLSYLNGEA

>N752_16665
MVILKDDGMTPIPHDHPMDKIRHIRRESKKRVFVTNALRSLAXLPLPAI

>N752_16670
MKKANINIEDVDHVRLDEIRLNEATPVIGDVAMETITETIITESTMIGHNPSTPGGIGLGVGTTVTWESLPDISPGEKVICLIPKGIDFEDAAEGINAAMEAGVDIQGAVVRQDDAVLIAKRLKHQIPVVDEVTLIEKVPVGMLSAVEVAEAGQTITTLSNPYGLATVFNLSSDETRMVVPIARALIGNRSAVVIRTPQGDVKARSIPAGSLNVMGERGRVEIDVESGAEAIMEVVERVQPINDVQGESGTHVNGMLERVRQVMAELTNQPLSEMKIQDVLAVDTFVPQKVQGGLAGEFALENAVALAAMVKTSRLPMQQIADKLTEELGTRVIIAGVEANMAIHGALTTPGTDRPLAILDMGGGSTDAAIVTREGKPISIHLAGAGDMVTMLINSELGLNDFDLAEDIKKYPLAKVESLYHVRLEDGTVKFFEEHLPPEVFARWSY

>N752_16675
MPIIAGVDIGNSTTEVCLAKVDHGQIYEYLSSSITKTTGIKAPLPMFRGW

>N752_16680
MADQKTIENIVREVLKSMAQTPQASTPRVTTQTGAVGLSPDRDYPLATKRPELLKTPTGKKIQDVTLEGILNGNIKSEDVRITPETLRLQAEIADGVGRTQFANNLRRAAELVAIPDERLLEIYNALRPYRSTKQELMEIAEEMEVKYNAKINAAFVREAAGVYERRKRLKAE

>N752_16685
MQISEQLIREIVGQVLSGMEQPTPAKKMAVATGRTMTLLEKGNATTGTKSDEVVIALAPAFGKHQNKTIVNIPHSDVLREVIAGIEEEGIRPRVIRVLGTSDVGFLAYEGAKICGSGVAVGLQSRGTT

>N752_16690
MFKELGFPAITDEEVEAATYAHGTKEVIKRNVVEDLKAAEEMMKRGITGVDIVKALAKNGFTDVAENV

>N752_16695
MLYLEVRCIMLTKGAGVQGLQNGSVSCIGVPAAVPSGIRAVLGENLTAAMLDLEVASSNDQTFTHSDIRRTARTLMQMLPGTDFICSGYSASPNYDNMFAGSNWDVDDYDDWNIIQRDLMVDGGLRPVSEEAVIAIRHKAGKAYRLCLRN

>N752_16700
MKRSKRFEMLAARPVNQDGFVVEWPEVGLVAMDNPKDPKPSIKIQGGKVIEMDGKPREQFDFIDQFIADYAIDTTVAEKAMAMDNTEIARMLVDIHVSRDEVIKITRGLTAAKIVAVLNTMNVVEMMMAMQKMRARKIPSNQCHVTNTQDNPVLIAADAAEAALRGFDEMETTVAVVRYAPFNALSLQVGARWDVVEYLSSVLWKKQLSFSWVCVESLPMPKQFLYTALKTYLLTVMILPGQRPFWPRPMPPAA

>N752_16705
MQYTARASLAINKAFGAPLGKAFGLIVGAPAAIGVVMADVAVKTASVEVVGFASPANGTSFSNEVILMITGDSGAVRQSVISARETGKKLLEAMAGPAPSVTTPYI

>N752_16710
MTDQLIEKVMDEIKKRTATVQDSPATGQRVFSKPSLTEFVGTAIGDTIGLVIANIDPTLHEKMKLDPKYRSLGILGARTGAGPHIMAADEAVKATNTEIVTIELPRDTKGGAGHGSLIIFGAEEVSDARRAIEVA

>N752_16715
MNDALGMVETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTVMVRGDVGAITAATDAGAAAARNVGEVVSVHVIPRPHSDVEKILPKN

>N752_16720
MIMVVGPIGTGKTSLLNALQQNGQKAVKTQSISYVNGSIDTPGEYVQMPRFYSSLTVTAAEAKIVLVVQDATDTKVSLPPGFISLLIRPVVGVITKIDLPGANREKAKALLKQAGIKEPYFYVSAHTGAGLPELIAYLRERGEKL

>N752_16725
MCAEKQRVVQEYVPGKQVTLAHLIANPKEELCEKLGISNNGAIGILTITPSEAAIIAADVATKLQRYSLGLWIVLQAL

>N752_16730
MKKVFEYFITPISLLGVGCLEELKNYLKPMSFRKALIVTDKVLVDTGLVDKLYTFLIGKEFCT

>N752_16735
MYIVYKDVSPNPTVNQVDFGLKLMKDNGCDFLISFGGGSPHDCAKAIALLATNGGDIRDYEGINKVKKSSAPLIAINTTAGTGSELTRFCIITDEERQIKMAINDWRVTPVIAVNDAELMIGKPPGLTSTTGMDALTHAIEAYVSVNASPITDCQARKAIDLVFNHLLEAYKDGNNIEAREGMVYAQFLAGIAFNNAGLGYVHAMAHQLGGFYDLPHGLCNAVLLPAVMRFNLPVVAKKYARVARAVGIDTGGLTDEQSAELLIEKIEQLNKELSIPLKLSELRGFNAGDIPQLAENALKDITRLTNPRQGNQEDVEEIYRSIV

>N752_16740
METDYSRIKQLHHLIETKTATKLSGPYKVGVDLGTADVVLVVTDNEGNPVAGSMRWASVVRDGLVVDFRGATSIVEELKDEVEQLIGVKLEKGATAVPPGTVGRNALACGHVIAGAGIEPVSQVDEPVAAAKALNIDHGIVVDIGGGTTGIAVLKNGDLAFTADEPTGGTHISLVLSGAYNIPFAEAEHMKRDESQHRKIMPVIFPVVEKMATIVKDMLAGHREYHDYPVYVVGGTAYLQDFETHFSKAFGRRVHVPPHPLLVTPLGIAMFG

>N752_16745
MSASILQVQGLHYTYPDGTLALRGLSTDIARGKKIALLGANGAGKSTFLLHLIGILKPFSGKILLHGEEVKYNRKALHNLRSKVGFVFQDPDTQLFSASVWQEVSFGPINLGLSKEEVKARVIKALDDTGITSLKDKPTHFLSYGQKKLVSIADILAMEPEVLIFDEPTASLDPRYTKHVMELLDQLNQSNITIIMATHCVDIAYGWADWVLVMKEGIITKEGTPEEIFTNDQLLISTNLSRPFLLEVFQELSSNNYLPRNISLPKKMADFKKILQENAPKNK

>N752_16750
MLLPMTFLLVGIIAIAVNIVQETSTLLWGVNLFSMTIGINYDSLYTAVNLFLRALAAVSCLYFLSLTTPLTEIISVLRRFKCPELLLDLMSLTYRFIFVLLETAEKIYTSQSARLGYASLRKGYQSTGSLATSLFVRTYKRSLDLYNTLEARCYNGKLEVLEQDYEVSKKIYL

>N752_16755
MLHLDRYAYNNSLVHIHPLERFLFSGVTLITSLILNCEVVSLLVILLMAWVTVHKGSLPFRFYFNSCFYL

>N752_16760
MIFYEEEFNINPLCCPTGCGPILILNDAEFGGADGQAEEIISEVSPDYTPWMEPIWEPPSGEIESLLFALQAALGAGFIGFYLGSKRGSRKAASSIDASS

>N752_16765
MSVLGSIVLLFQALLLAHGGITTLGANIFSMAVVGPFVAYGVYLIINKSGGPKWLAVFSAAALGNLLTYVTTSFQLAFAFPDVTGGIMVSLVKFLGIFAVTQLPLAISEGLLTVLIYNLLTAHSSNELKSIQTLKYNLK

>N752_16770
MVPALGRPFSPLYYLGLLLHKKIVSEKPELKMLLGLVCAFAFVLSALKIPSVTGSCSHPTGVGLGAILFGPAP

>N752_16775
MNIAGEHALSDLAGDGEDSWKSVLSPLFKVNINLSGLLDYEDIVKIYIDHLIAVFEELHN

>N752_16780
MLYHQSDYEAVIKFLKCCLPSNSPEHALVLVGHGSEHPAFSTYGCLNDMLRRTCPNLFLGTVEGFPSLTDVKEDLVKARAKEITIMPL

>N752_16785
MSHKSGDLLNAELFLPRRGKQLRIGHLQLFDNLNFAKLRLLFFGGEYLNHSRDTAILLVTFGTNVTQAATSFKNLEDKVKETFPNIEVRWAYTAKSIRQRLGKMGFHYDSPVTALARLQDEGYTRVAVQSVHMIAGQEYYDLVNVVENMSHLRGISGHNFHPKLANLALKN

>N752_16790
MELLQETLSKIQEPNRNVEELAQRRLDNLTKPLGSLGVLEEIASRLAGIQGQALPKLPKEKAIIVLAGDHGVTNEGVSASHRR

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021