Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: PDU1AB


Organism: Klebsiella pneumoniae. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

         SAMEA104567903_02340 (fasta) HMMreg00392_2_grm2 EUT2A (details)
                SAMEA104567903_02341 (fasta) HMM00288_1_pdu PDU1AB (details)
                         SAMEA104567903_02342 (fasta) HMMacetkin_1 PDU1AB (details)
                            SAMEA104567903_02343 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                              SAMEA104567903_02344 (fasta) Hp_euts_babyPurple PDU1AB (details)
                                  SAMEA104567903_02345 (fasta) Ts_dodgerBlue PDU1AB (details)
                                             SAMEA104567903_02346 (fasta) HMMPduS_1_all PDU1AB (details)
                                                      SAMEA104567903_02347 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                                 SAMEA104567903_02348 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                                         SAMEA104567903_02349 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                           SAMEA104567903_02350 (fasta) P_babyPink PDU1AB (details)
                                                                               SAMEA104567903_02351 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                                                    SAMEA104567903_02352 (fasta) HMMptac_2_mix PDU1AB (details)
                                                                                       SAMEA104567903_02353 (fasta) H_driedBlood PDU1AB (details)
                                                                                         SAMEA104567903_02354 (fasta) H_tan PDU1AB (details)
                                                                                           SAMEA104567903_02355 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                                                                                          SAMEA104567903_02356 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                                                                              SAMEA104567903_02357 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                                                                                                                   SAMEA104567903_02358 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                                                                                                                                SAMEA104567903_02359 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                                                                                                                      SAMEA104567903_02360 (fasta) Tsp_greenishBeige PDU1AB (details)
                                                                                                                                        SAMEA104567903_02361 (fasta) H_robinEggBlue GRM4 (details)
                                                                                                                                              SAMEA104567903_02362 (fasta)
                                                                                                                                                     SAMEA104567903_02364 (fasta) HMM10114PocR_1_pdu1 PDU1AB (details)
                                                                                                                                                                SAMEA104567903_02366 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_robinEggBlue
       H_driedBlood
       H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

       Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>SAMEA104567903_02340
MALLKSAHGGNIREAAALLGIAPGELLDFSANINPLGMPASLRQAIVDNPGCAERYPDVEYQQLHQALAAHHQLPAAHILAGNGETESIFTLVHGLKPRRAMIVIPGFAEYRRALQTVDCELVEYALRECDGWQLTDAILDALTPALDCLFLCTPNNPTGLLPERGLLEAIAQRCRALNISLILDEAFLDFIPDQPGFIPLLAQHPHVWVLRSLTKFYAIPGLRLGYLLNADAQAVARLRERQMPWSINAYAALAGEIILQDRAYQRATWQWLQEEGARFYSRLKEITGLTVWPGRANYLFLRCDRQGLDLQYALLRQHVLIRSCANYPGLDSRYFRMAIRSASENDQLLAALRRALA

>SAMEA104567903_02341
MRPGEGKRKGENVAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVEVETGVPRKDERPLSRAMVDQLLAHWGYPPALSQQIRITLHSTIPVAKGMASSTADIAATAVATAHHLGHLLDEPTLARLCVALEPTDSTLFRQLTLFDHNTAATQIACPPPPALDLLVLESPLTLRTTDYHQLPREAGLLANASRLQLAWEKVQQACHCGSPQLLGEAATISAIASQQLLPKPGFDALLELVESAGLYGLNVAHSGSVVGLLLDRRRHDVEFLQWRLAESDIAAHWPQQHLLAMVPGGVTLQ

>SAMEA104567903_02342
MTYKIMAINAGSSSLKFQLLNMPQGALLSQGLIERIGLSEARFTLKTPTQKWQETLPIADHHEAVPLLLEALTGRGILSSLQEIDGVGHRVAHGGERFKDAALVCDDTLREIERLAELAPLHNPVNALGIRLFRQLLPAVPAVAVFDTAFHQTLAPEAWLYPLPWRYYAELGIRRYGFHGTSHHYVSSALAEKLGVPLSALRVVSCHLGNGCSVCAIKGGQSVNTSMGFTPQSGVMMGTRSGDIDPSILPWLVEKEGKSALQLSQLLNNESGLLGVSGVSSDYRDVEQAADAGNERAALALSLFAERIRATIGSYIMQMGGLDALIFTGGIGEHSARARATICRNLHFLGLALDDEKNQRSATFIQADNALVKVAVINTNEELMIARDVMRLALPQARELAVSA

>SAMEA104567903_02343
MKRLMLIGPSQCGKTSLTQVLRGETLRYQKTQAIVWTPAAIDTPGEYLENRCLYSALLTSACEADIIALVLNADAPWSPFSPGFTAPMNCPVIGVITKADLAAPPRLQQVRAWLEAAGAEHIFITSALTGDGLDDLLACLNAEEYQ

>SAMEA104567903_02344
MEPQTPTERMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALRQVTRTLGELMRFTACPITRT

>SAMEA104567903_02345
MTQAIGILELTSIARGMELGDVMLKSANVQLLLCRTLCPGKFLLMLGGDVGAVQQAIAAGTARAGEMLVDSLVLANIHPSVLPAISGLNVVEQRQAAGIVETWSVAACISAADRAVKAANVTLVRIHMAFGIGGKCYMVVAGDIADVDNAVTVASDSAGEKGLLVYRAVIPRPHDALWQQLMEG

>SAMEA104567903_02346
MSEAIVPLPDMDPAEIRERVRAAGVVGAGGAGFPTHIKLQARVDTVLVNAAECEPMLKVDQQLMAQQADRLIRGLGYAMTATGAREGIIALKAKYAAAIAALTPRLPEWARLHILPDVYPAGDEVLTIWLATGRRVPPAALPVSVGVVVNNVQTVLNIARAVEQGYPVTRRTLTVNGAVARPLTLTVPLGMSLREVLDLAGGATVAEPGFINGGPMMGSLMTSLETPVTKTTGGLLVLPGNHPLIQRRRQDERTLLAIARTVCEQCRLCTDLCPRHLIGHELSPNLLVRAVNYRQAATPSLLLSALTCSECNVCESVACPVGISPMRINRLLKRELRAKNLRYEGPLRPADEMAKHRLVPVKRLISKLGLDPWYQEAPLTAVEPEVGCVTLPLRQHIGISAVPCVAPGERVTRGQLLADIPADALGAPVHASIDGQVSAITEQAITLVRG

>SAMEA104567903_02347
MHTFSLQTRLYSGPGSLTALQRFSHQHIWIVCDGFLARSPLFERLRAALPASNRVSVFSDITPDPTIHTVAKGIAQMQTLRPQVVIGFGGGSAMDAAKAIVWFSQQGGLPVDTCVAIPTTSGTGSEVTSACVISDPEKGIKYPLFHEALCPDMAILDPTLVVSVPPTITAHTGLDVLTHALEAWVSPQATDFTDALAEKAARLVFRALPVAVRQGDCVATRSKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTAVIRFNAGEPRAAKRYARLARACRFCPPEAGEQEALQALIAAVETLKQQCAIPTLKGALQEKYPLFLSRIPAMVPAALADATLRTNPRPADGAAIAQLLESLQ

>SAMEA104567903_02348
MNTAELETLIRTILSEKLAPAPVSQEQQGIFRDVGSAIDAAHQAFLRYQQCPLKTRSAIISALRETLAPELATLAEESATETGMGNKEDKYLKNKAALENTPGIEDLTTSALTGDGGMVLFEYSPFGVIGAVAPSTNPTETIINNSISMLAAGNSVYFSPHPGAKKVSLTLIARIEEIAYRCSGIRNLVVTVAEPTFEATQQMMAHPLIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIISGAAFDYNLPCIAEKSLIVVASVADRLIQQMQDFDALLLSPQETDTLRAVCLPDGAANKKLVGKSPAELLAAAGLAVPSRPPRLLIAEVQANDPWVTCEQLMPVLPIVRVADFDSALALALRVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARLRRCVLTNGFSIR

>SAMEA104567903_02349
MAIYTRTGDAGSTSLFTGQRVSKTHPRVEAYGTLDELNAVLSLCVCAAAEEEHRVLLEALQQHIFWFSAELASDSEQPSPGKRYISSEEIALLEQTIDREMARVPALHQFVLPGRCEAASRLHLARTVARRAERRLVELAAEVTIRQILLRYLNRLSDCLYALARSEDHADHQRRLVAEIAARYLAASGSPASDAPKAQAGALSFHELHQLTRQAIEHARQLQVPVVVSIVDAHGTETVTWRMPDALLVSSELAPKKAWTAVAMKTATHELATTVQPGAALYGLESHLQGKVVTFGGGYPLWRDGQLIAGLGISGGSVEQDMAIAQAAMAAINVRTHQ

>SAMEA104567903_02350
MHLARVTGAVVSTQKSPSLNGKKLLLVRRVSTDDEHPFPPASGDEVAVDSVGAGVGELVLLCSGSSARHVFSGPNEAIDLAVVGIVDSLSR

>SAMEA104567903_02351
MNHAMLQRIVEEVAARLRRRARSTATLSVAQLGEADIHSLLCQHASLRIVQVDLPLLEQLTGQRALTAAGCALHEAMAWGVRVQLTLLPALLPALAVKKLARLPLTFSDPPGQPVRLHAASVLTYADVARLHGGYLVLRRRPIITALAREAAVARHVQLITQE

>SAMEA104567903_02352
MDKQQLASTVNKVLDEMRQRPIPIGISSRHIHLAAEDYARLFPAQPIQPKKALLQPGQYAAEQTVTLVGPKGRLNNVRLLGPLRQTSQVEISRTDARTLGIAAPLRMSGNLQDTPGIRLISPFAELELSSGTIVAQRHIHMSPLDALILRVAHGDSVAVAIEGSDRRLIFDNVAVRVAPDMRLEMHIDTDEANAAGADAAQAWATLVTKP

>SAMEA104567903_02353
MKQSLGLLEVSGLALAITCADAMAKAAAITLLALEKTNGSGWMVVKIVGDVASVQAAVMTGAELADRQQGLVAQKVIARPGAGLLPARVEAPSPAPDAALEEENATVMDERRDPADTLPRPAEQVTCNLCLDPHCPRQKGEPRSQCLHAGKRGDA

>SAMEA104567903_02354
MNNALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASVVGEVKSSHVIPRPHSDVEAILPKSV

>SAMEA104567903_02355
MESSVVAPAIVIAVTDECSEQWRDVLLGIEEEGIPFVLQAQTGGDLVHHAWQAAQRSPLLVGIACDREQLIVHYKNLPASIPLFSLRYHQDRLARRNTGNNAARLVKGIPFRDRNA

>SAMEA104567903_02356
MRYIAGIDIGNSSTEVALATVDDAGVLNIRHSALAETTGIKGTLRNVFGIQEALTQAAKAAGIQVSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGVGLGVGITITPEALLSCAADAPYILVVSSAFDFADVAAMVNAATAAGYQISGIILQQDDGVLVNNRLQQPLPVIDEVQHIDRIPLGMLAAVEVALPGKIIETLSNPYGIATVFNLNAEETKNIVPMARALIGNRSAVVVKTPSGDVKARTIPAGNLLLIAQGRSVQVDVAAGAEAIMKAVDGCGKLDNVAGEAGTNIGGMLEHVRQTMAELTNKPAQEIRIQDLLAVDTAVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMALIAREIEHKLQIAVQVGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINAQGEISATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFPSALPPAVFARVCVVKPDELVPLPGDLPLEKVRAIRRSAKSRVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEIPQLVTDALAHYRLVAGRGNIRGSEGPRNAVASGLLLAWQKGGTHGE

>SAMEA104567903_02357
MNTDAIESMVRDVLSRMNSLQDGATPAPAAPTNDTARQPKVSDYPLATRHPEWVKTATNKTLDDLTLENVLSDRVTAQDMRITPETLRMQAAIAQDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTQAELLAIADDLEHRYQARLCAAFVREAAGLYVERKKLKGDD

>SAMEA104567903_02358
MEINETLLRQIIEEVLSEMKSGADKPVSFSAPAASVASAAVAPVSSDSFLTEIGEAKPGTQQDEVIIAVGPAFGLAQTANIVGIPHKNILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQRGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRMAL

>SAMEA104567903_02359
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIRIVNGAVTELDGKPVEQFDLIDHFIARYGINLARAEEVMAMDSVKLANMLCDPNVKRSDIVPLTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNIKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSALDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAKGGFPDVAQDMLNIQKAKLTGDYLHTSAIIVGEGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNELG

>SAMEA104567903_02360
MSSNELVEQIMAQVIARVATPEQQALPDTPHPTGETAMAEKSCSLTEFVGTAIGDTLGLVIANVDAALLEAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIVLGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFGAPLGRACGIIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVISAREIGKTVLGTLGAEPKNDRPSYI

>SAMEA104567903_02361
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYERIGSGLVTVIVRGDVGAVKAATDAGAAAARHVGEVKAVHVIPRPHTDVEKILPKGNSQ

>SAMEA104567903_02362
MNGSLRAQCIAEFLGTGLFLFFGICCLSALKLAGASLGLWEICIIWGLGISLAVYLTAGISGGHLNPAVTVALWLFACFPGRKVLPYIVAQVAGAFGGAVLAWILYSTLFTQFETVHHMVRGSLESLQLASIFSTYPAPELSIWHAALVEVVITSMLMGMIMALTDDGNGVPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFAWLAGWGDIAMTGGRDIPYFIVPIIAPLLGACLGAAIYRFLIANNLPCHTCVEEKNTR

>SAMEA104567903_02364
MISASTLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPFCQLMRQHPEHSGRCRMSDRCGGLEASKNDQLCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDIELVDILNVDDRWQDDPALVQAFRDVPEMDYSRVIASADLLKLIVENCLKKQLNFVVIKDNPPQNDPAQACRAASPHDGKMKKALRYIDAHLSDELRLEDVAAHVYLSPYYFSKLFKKYQGIGFNAWVNQQRMASAKELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAFRQQINAGSQTESF

>SAMEA104567903_02366
MATRRAFILAGTGSGCGKTTVTLGLLSLLQQRGLRVQPCKVGPDYLDTAWHTAISGIASRNLDSFMLPAPILNALFAEQLQQADIAVIEGVMGLYDGYGIDPNYCSSAAMAKQLGCPVILLVDGKAVSTSIAATVMGFQHFDPALNIAGVIVNRVNSEAHFQLLKSAIERYCQVPVLGYVPRVEGVALPERHLGLVTARESVVNQQAWRDFASLLGRTLDIDRLLALSELAAMPAGEWGEQLAADAGEGLTLALADDEAFNFYYPDNLALLARCGVKMVRFSPLRDRQLPACQMIWLGGGYPELHAAGLSANHEMLAQLRAAHRRGVAIYAECGGLMYLGTTLEVTGGERYAMVDIIPGHSRMGTRLTRFGYCEAQAQQQTLLAAPGEWLRGHEFHYSDFSPATPAVLACRKQRDGKTLQQWPGGWQSGSAFASYLHVHFAQRPTMLNHWLRAARRAQ

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021