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BMC type: PDU1AB


Organism: Klebsiella pneumoniae. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

   NCTC5047_01674 (fasta)
              NCTC5047_01675 (fasta)
                        NCTC5047_01676 (fasta)
                         NCTC5047_01677 (fasta)
                                 NCTC5047_01678 (fasta) HMMreg00392_2_grm2 EUT2A (details)
                                      NCTC5047_01679 (fasta) HMM00288_1_pdu PDU1AB (details)
                                       NCTC5047_01680 (fasta) HMM00288_1_pdu PDU1AB (details)
                                                 NCTC5047_01681 (fasta) HMMacetkin_1 PDU1AB (details)
                                                  NCTC5047_01682 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                                                   NCTC5047_01683 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                                                     NCTC5047_01684 (fasta) Hp_euts_babyPurple PDU1AB (details)
                                                       NCTC5047_01685 (fasta) Ts_dodgerBlue PDU1AB (details)
                                                                  NCTC5047_01686 (fasta) HMMPduS_1_all PDU1AB (details)
                                                                           NCTC5047_01687 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                                                      NCTC5047_01688 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                                                             NCTC5047_01689 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                                               NCTC5047_01690 (fasta) P_babyPink PDU1AB (details)
                                                                                                   NCTC5047_01691 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                                                                        NCTC5047_01692 (fasta) HMMptac_2_mix PDU1AB (details)
                                                                                                           NCTC5047_01693 (fasta) H_driedBlood PDU1AB (details)
                                                                                                             NCTC5047_01694 (fasta) H_tan PDU1AB (details)
                                                                                                               NCTC5047_01695 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                                                                                                   NCTC5047_01696 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                                                                                        NCTC5047_01697 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                                                                                          NCTC5047_01698 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                                                                                             NCTC5047_01699 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                                                                                                 NCTC5047_01700 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                                                                                                                                      NCTC5047_01701 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                                                                                                                                                    NCTC5047_01702 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                                                                                                                                          NCTC5047_01703 (fasta) Tsp_greenishBeige PDU1AB (details)
                                                                                                                                                            NCTC5047_01704 (fasta) H_robinEggBlue GRM4 (details)

BMC shell protein types:

BMC-H(map on tree)

       H_robinEggBlue
       H_driedBlood
       H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

       Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>NCTC5047_01674
METKPNWLVRHINLITTAVALYPWLLMILLLWDNQRHHQHGYAALGAAIAILFLLALTSGMNLLISSLVIFCARCSTPPLAGGAAVRFFAMNSISALWLIPLFFSY

>NCTC5047_01675
MVKERRTELVEGFRHSVPYINAHRGKTFVIMLGGEAIEHENFSNIVNDIGLLHSLGIRLVVVYGARPQIDANLAEHHHEPVYHKQTRVTDAKTLELVKQAAGMLQLEITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEEAIHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLTIKLKAEKMIGFCSSQGVYNQAGEIVSELFPNEAQARVEELEADEDYNSGTVRFLRGAVKACRSGVRRCHLISYQENGALLQELFSRDGIGTQIVMESAEQIRRATINDIGGILELISPLEQQGILVRRSREQLEMEIDKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQARQMGLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQMYNYQRRSKVLMADLA

>NCTC5047_01676
MSGNNSGLSRRRLLQGAGAMWLMSVSPVGLAAAARVVAVRVWPASTYTRVTVESNHVLKYRQFALSNPERVVVDLEGVNLNSVLKGMGGQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANATDVQDPLLALLEDYNKGDLERQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYRTREKDVVLQIARRLRALIDKEGNMKAYMTRNEDVFIPLKVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLEKMGNINNLHKNRVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKNGQIPAGGGRVDPRRD

>NCTC5047_01677
MALLKSAHGGNIREAAALLGIAPGELLDLAPTSIRWGCLPRSGRRS

>NCTC5047_01678
MPASLRQAIVTTQAAPNATLTSSINSCIRRWLPTISCRRRHILAGNGETESIFTLVHGLKPRRAMIVIPGFAEYRRALQTVDCEVVEYALRERDGWQLTDAILDALTPALDCLFLCTPNNPTGLLPERGLLEAIAQRCRALNISLILDEAFLDFIPDQPGFIPLLAQHPHVWVLRSLTKFYAIPGLRLGYLLNADAQAVARLRARQMPWSINAYAALAGEIILQDRAYQRATWQWLQEEGARFYAQLQEMAGLTVWPGRANYLFLRCDRADFDLQYALLRQHVLIRSCANYPGLDSRYFRVAIRSAEENDQLLAALRRVLA

>NCTC5047_01679
MASSTADIAATAVATAHHLGHLLDEPTLALLCVRAGAYRQHPVSPADAVDHNTAATQIACPPPPALDLLVLESPLTLRTTDYHQLPREPGLLANASRLQLAWEKVQQACHCGNPQLLGEAATISAIASQQLLPKPGFDAPLDLVESAGLYGLNVAHSGSIVGLLLDRRRHDVEFLQWRLADSDIAAHWPQQHLLAMVPGGVILQ

>NCTC5047_01680
MRPGEGKRKGENVAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVEVETGVPRKDERPLSRAIVDQLLAHWATPQR

>NCTC5047_01681
MTYKIMAINAGSSSLKFQLLNMPQGALLCQGLIERIGLPEARFTLKTSAQKWQETLPIADHHEAVTLLLEALTGRGILSSLQEIDGVGHRVAHGGERFKDAALVCDDTLREIERLAELAPLHNPVNALGIRLFRQLLPAVPAVAVFDTAFHQTLAPDAWLYPLPWRYYAELGIRRYGFHGTSHHYVSSALAEKLGVPLSALRVVSCHLGNGCSVCAIKGGQSVNTSMGFTPQSGVMMGTRSGDIDPSILPWLVEKEGKSAQQLSQLLNNESGLLGVSGVSSDYRDVEQAADAGNERAALALSLFAERIRATIGSYIMQMGGLDALIFTGGIGENSARARATICRNLHFLGLALDDEKNQRSATFIQADNALVKVAVINTNEELMIARDVMRLALPQARELAVSA

>NCTC5047_01682
MNRPVIGVITKADLAAPPRLQQVRTWLDAAGAGHIFITSALTGDGLDDLFACLNTEEYQ

>NCTC5047_01683
MKRLMLIGPSQCGKTSLTQVLRGETLRYQKTQP

>NCTC5047_01684
MEPQTPTERMIQEYVPGKQVTLAHLIANPGKDLFKSWGLPDAVSAIGILTITPVKHRLSACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVE

>NCTC5047_01685
MDSLVLANIHPSVLPAISGLNVVGQRQAAGIVETWSVAACISAADRAVKAANVTLVRVHMAFGIGGKCYMVVAGDIADVDNAVTVASDSAGEKGLLVHRAVIPRPHDALWQQLMEG

>NCTC5047_01686
MSEAIVPLSSIDAAEIRERVRAAGVVGAGGAGFPTHIKLQARVDTVLVNAAECEPMLKVDQQLMAQQADRLIRGLGYAMTATGAQEGIIALKAKYAPAIAALTPRLPEWARLHILPDVYPAGDEVLTIWLATGRRVPPAALPVSVGVVVNNVQTVLNIARAVEQGYPVTRRTLTVNGAVARPLTLAVPLGISLREVLDLAGGATVDDPGFINGGPMMGSLITSLETPVTKTTGGLLVLPGNHPLIQRRRQDERTLLAIARTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNYRQAATPSLLLSALTCSECNVCESVACPVGISPMRINRLLKRELRAKNLRYDGPLRPADEMAKHRLVPVKRLISKLGLDPWYQEAPLTAVEPEVACVTLPLRQHIGISAVPCVAPGERVTRGQVLADIPADALGAPVHASIDGLVSAITEQAITLVRG

>NCTC5047_01687
MHTFSLQTRLYSGPGSLAALQRFSHQHIWIVCDGFLARSPLLDRLRAALPASNRVSVFSDITPDPTIHTVAKGIAQMQALRPQVVIGFGGGSAMDAAKAIVWFSQQGGLPVDTCVAIPTTSGTGSEVTSACVISDPEKGIKYPLFHEALCPDMAIIDPTLVVSVPPTITAHTGLDALTHALEAWGSPQATDFTDALAEKAARLVFRALPVAIRQGDCIATRSKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHIPHGLANALLLTAVIRFNTGEPRAAKRYARLARACRFCPPEAGEQEAFQALLTAVETLKQQCAIPTLKGALQEKYPLFLSRIPAMVPAALADATLRTNPRPVDGAAIAQLLESLQ

>NCTC5047_01688
MNTAELETLIRTILSEKLAPTPPAPQQEQGIFCDVGSAIDAAHQAFLRYQQCPLKTRSAIISALRETLAPELATLAEESATETGMGNKEDKYLKNKAALENTPGIEDLTTSALTGDGGMVLFEYSPFGVIGAVAPSTNPTETIINNSISMLAAGNSVYFSPHPGAKKVSLKLIARIEEIAYRCSGIRNLVVTVAEPTFEATQQMMSHPLIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIISGAAFDYNLPCIAEKSLIVVASVADRLIQQMQDFDALLLSRQEADTLRAVCLPDGAANKKLVGKSPAALLAAAGLAVPPRPPRLLIAEVEANDPWVTCEQLMPVLPIVRVADFDSALALALRVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARLRRCVLTNGFSIR

>NCTC5047_01689
MAIYTRTGDAGSTSLFTGQRVSKTHPRVEAYGTLDELNAMLSLCVCAVAEEEQRTLLEALQQHIFWFSAELASDSEQPSPGKRYISSEEIALLEQTIDREMARVPALHQFVLPGRCEAASRLHLARTVARRAERRLVELGAEVTIRQILLRYLNRLSDCLYALARSEDHAAHQRRLVTEIAARYLAASRSPAPDAPKAQAGSLSFHELHQLIRQAIEHARQLQVPVVISIVDAHGTETLTWRMPDALLVSSELAPKKAWTAVAMKTATHELATTVQPGAALYGLESHLQGKSRHLWRRISAVARWPANSRPRH

>NCTC5047_01690
MHLARVTSAVVSTQKSPSLNGKKLLLVRRVSADDDRPILPTSGDEVAVDSVGAGVGELVLLCSGSSARHVFSGPNEAIDLAVVGIVDSLSR

>NCTC5047_01691
MNHAMLQRIVEEVAARLRRRALSTATLSVAQLGEADIRSLLCQHASLRIVQVDLPLLEQLAGQRALAAAGCALHEAMAWGVRVQLTLLPALLPALAVKKLARLPLTFSDPLGQPVRLHAASVLTYADVARFSGGYLVLCRRPIITALAREAAVARHVQLIKQE

>NCTC5047_01692
MDKQQLASTVNKVLDEMRQRPIPIGISSRHIHLAAADYARLFPAQPIQPKKALLQPGQYAAEQTVTLVGPKGRLNNVRLLGPLRQTSQVEISRTDARILGIAAPLRMSGNLQGTPGIRLISPFAELELSGGTIVAQRHIHMSPLDALILRVSHGDNVAVAIEGSDRRLIFDNVSVRVAPDMRLEMHIDTDEANAAGADAAQAWATLVTKP

>NCTC5047_01693
MKQSLGLLEVSGLALAITCADAMAKAAAITLLALEKTNGSGWMVVKIAGDVASVQAAVMTGAELAERQQGLVAQKVIARPGEGLLPARVQAPSPAPDVAVTEENTALTDAPSHSTERVTCNLCLDPHCPRQKGDPRSQCLHAGKRGDA

>NCTC5047_01694
MNNALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASVVGEVKSSHVIPRPHSDVEAILPKSV

>NCTC5047_01695
MESSVVAPAIVIAVTDECSEQWRDVLLGIEEEGIPFVLQPQTGGDLIHHAWQAAQRSPLQVGIACDRERLIVHYKNLPASTPLFSLMYNQNRLARRNTGNNAARLVKGIPFRDRHA

>NCTC5047_01696
MVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFPSALPPAVFARVCVVKPDELVPLPGDLPLEKVRAIRRSAKSRVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEIPQLVTDALAHYRLVAGRGNIRGSEGPRNAVASGLLLAWQKGGTHGE

>NCTC5047_01697
MARALIGNRSAVVVKTPSGDVKARAIPAGNLLLIAQGRSVQVDVAAGAEAIMKAVDGCGKLDNVAGEAGTNIGGMLEHVRQTMAELTNKPAQEIRIQDLLAVDTAVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMALIAHEIEHKLQIAVQVGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDAPLSCAGRDQRHSPGRRRRYGHDDHRSRAGA

>NCTC5047_01698
MVSSAFDFADVAAIVNAATAAGYQITGIILQQDDGVLVNNRLQQPLPVIDEVQHIDRIPLGMLAAVEVALPGKIIETLSNPTVLRPFSISTPRRPKISYQWRGR

>NCTC5047_01699
MRYIAGIDIGNSSTEVALATVDDAGVLNIRHSALAETTGIKGTLRNVFGIQEALTQAAKAAGIQLSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGVGLGSASPSHQRRCCPAPRTLPIFWWSPRPLTLPMSPR

>NCTC5047_01700
MNTDAIESMVRDVLSRMNSLQDGITPAPATPTNDTVRQPKVSDYPLATRHPEWVKTATNKTLDDLTLENVLSDRVTAQDMRITPETLRMQAAIAQDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTQAELLAIADDLEHRYQARLCAAFVREAAGLYIERKKLKGDD

>NCTC5047_01701
MEINETLLRQIIEEVLVEMKSGADKPVSFSASAASVASAAPVAVAPVSSDSFLTEIGEAKPGTQQDEVIIAVGPAFGLAQTANIVGIPHKNILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQRGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL

>NCTC5047_01702
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIRIVNGAVTELDGKPVEQFDLIDHFIARYGINLARAEEVMAMDSVKLANMLCDPNVKRSDIVPLTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNIKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSALDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAKGGFPDVAQDMLNIQKAKLTGDYLHTSAIIVGEGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNELG

>NCTC5047_01703
MSSNELVEQIMAQVIARVATPEQQALPDTPHPTGETAMAEKSCSLTEFVGTAIGDTLGLVIANVDAALLEAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIVLGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFGAPLGRACGIIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVISAREIGKTVLATLGAEPKNDRPSYI

>NCTC5047_01704
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYERIGSGLVTVIVRGDVGAVKAATDAGAAAARHVGEVKAVHVIPRPHTDVEKILPKGNSQ

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021