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BMC type: PDU1AB


Organism: Salmonella enterica subsp. enterica serovar Minnesota str. A4-603. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

   LTSEMIN_3196 (fasta)
     LTSEMIN_3197 (fasta)
         LTSEMIN_3198 (fasta)
             LTSEMIN_3199 (fasta)
               LTSEMIN_3200 (fasta)
                  LTSEMIN_3203 (fasta)
                      LTSEMIN_3204 (fasta)
                         LTSEMIN_3205 (fasta)
                           LTSEMIN_3206 (fasta)
                                 LTSEMIN_3207 (fasta)
                                   LTSEMIN_3210 (fasta) Hp_euts_babyPurple PDU1AB (details)
                                       LTSEMIN_3211 (fasta) Ts_dodgerBlue PDU1AB (details)
                                                 LTSEMIN_3212 (fasta) HMMPduS_1_all PDU1AB (details)
                                                   LTSEMIN_3213 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                             LTSEMIN_3215 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                              LTSEMIN_3216 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                 LTSEMIN_3218 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                   LTSEMIN_3219 (fasta) P_babyPink PDU1AB (details)
                                                                      LTSEMIN_3220 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                                          LTSEMIN_3221 (fasta) HMMptac_2_mix PDU1AB (details)
                                                                             LTSEMIN_3222 (fasta) H_driedBlood PDU1AB (details)
                                                                               LTSEMIN_3223 (fasta) H_tan PDU1AB (details)
                                                                                 LTSEMIN_3224 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                                                                         LTSEMIN_3225 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                                                            LTSEMIN_3228 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                                                                                                 LTSEMIN_3229 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                                                                                                        LTSEMIN_3230 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                                                                                            LTSEMIN_3231 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                                                                                             LTSEMIN_3232 (fasta) Tsp_greenishBeige GRM4 (details)
                                                                                                                 LTSEMIN_3233 (fasta) Tsp_greenishBeige PDU1AB (details)
                                                                                                                  LTSEMIN_3234 (fasta) H_robinEggBlue PDU1D (details)
                                                                                                                   LTSEMIN_3235 (fasta)
                                                                                                                         LTSEMIN_3236 (fasta)
                                                                                                                               LTSEMIN_3237 (fasta) HMM10114PocR_1_pdu1 PDU1AB (details)
                                                                                                                                 LTSEMIN_3238 (fasta)
                                                                                                                                  LTSEMIN_3239 (fasta)
                                                                                                                                        LTSEMIN_3240 (fasta)
                                                                                                                                           LTSEMIN_3241 (fasta)
                                                                                                                                              LTSEMIN_3242 (fasta)
                                                                                                                                                  LTSEMIN_3243 (fasta)
                                                                                                                                                       LTSEMIN_3244 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_robinEggBlue
       H_driedBlood
       H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

      2x Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>LTSEMIN_3196
MSVIKKNIPAIGLCICAFFIHSAVGQQTVQGGVIHFRGAIVEPLCDISTHAENIDLTCLREGKKQMHRIDLRQASGLPQDIQSIATVRLHYLDAQKSLAVMNIEYR

>LTSEMIN_3197
VSPVFFREEIMHTLLLLAALSNQITFTTTQQGDIYTVIPQVTLNEPCVCQVQILSVRDGVGGQSHTQQKQTLSLPANQPIELSRLSVNISSEDSVKIIVTVSDGQSLHLSQQWPPSAQ

>LTSEMIN_3198
MISLMCRFSVMMRAMNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQGGFKGLLISACTLLSGMVWALVIIHGSALAPHLEIVSYVLTGIVAFLMCIQAKQLLLSFVPGTFIGACATFAGQGDWRLVLPSLALGLIFGYAMKNSGLWLASRREQHSANTAVTXHTLN

>LTSEMIN_3199
MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQDDMLARLQKSCDITQISTDYNALFVGEECAVAPYRSAWVEGAEESEVRAFLTSRGMPLADTPADHIGTLLLAASWLEDQSAEDESEALETLFADYLLPWCNTFLGKVEAHAVTPFWRTLAPLTRDAIGAMWDELQEEDEE

>LTSEMIN_3200
MEVNAIAQAAAKHHVALEINNSSFLHSRKGSEDNCRAVAAAVRDAGGWVALGSDSHTAFTLGDFTECRKILDAVNFPEDRILNVSPQRLLAFLESRGMAPVPEFAEL

>LTSEMIN_3203
MYDQVQGDSMKNKLLFMMLTILGAPGIATATNYDLARSEYNFAVNELSKSSFNQAAIIGQVGTDNSARVRQEGSKLLSVISQEGGNNRAKVDQAGNYNFAYIEQTGNANDASISQSAYGNSAAIIQKGSGNKANITQYGTQKTAVVVQKQSQMAIRVTQR

>LTSEMIN_3204
MFNEVHSSHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQRSLEDISAGCIVLMDMMEADKKLIHYWQDNLSRKNNNIKTLLLNTPDDYPYREIENWPHINGVFYATEDQEHVVSGLQGILRGECYFSQKLASYLITHSGNYRYNSTESALLTHREKEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR

>LTSEMIN_3205
MKRYLTWIVAAELLFATGNLHANEVEVEVPGLLTDHTVSSIGHEFYRAFSDKWESDYTGNLTINERPSARWGSWITITVNQDVIFQTFLFPMKRDFEKTVVFALAQTEEALNRRQIDQTLLSTSDLARDEF

>LTSEMIN_3206
MLFSPLTWAGNMTFQFRNPNFGGNPNNGSFLLNSAQAQNSYKDPAYDNDFGIETPSALDNFTQAIQSQILGGLLTNINTGKPGRMVTNDFIIDIANRDGQLQLNVTDRKTGRTSTIEVSGLQTQSTDF

>LTSEMIN_3207
MPRLLILVAVLLLSGCLTAPPKQAAKPTLMPRAQSYKDLTHLPAPTGKIFVSVYNIQDETGQFKPYPASNFSTAVPQSATAMLVTALKDSRWFIPLERQGLQNLLNERKIIRAAQENGTVAMNNRIPLQSLTAANIMVEGSIIGYESNVKSGGVGARYFGIGADTQYQLDQIAVNLRVVNVSTGEILSSVNTSKTILSYEVQAGVFRFIDYQRLLEGEIGYTSNEPVMLCLMSAIETGVIFLINDGIDRGLWDLQNKADRQNDILVKYRELSVPPES

>LTSEMIN_3210
MATDGGGIMERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLGEMMHFTTCSITRT

>LTSEMIN_3211
MSQAIGILELTSIAKGMELGDAMLKSANVDLLVSKTICPGKFLLMLGGDIGAVQQAIETGTSQAGEMLVDSLVLANIHPSVLPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEKGLLVYRSVIPRPHEAMWRQMVEG

>LTSEMIN_3212
MSTTVNVVEMSYSADEIRERVRAAGVVGAGGAGFPAHVKLQAQVEIFLVNAAECEPMLKVDQQLMWQQAARLVRGVQYAMTATGAREGVIALKEKYRRAIDALTPQLPAGIRLHILPDVYPAGDEVLTIWMATGRRVAPAALPASVGVVVNNVQTLLNIARAVEQQFPVTRRTLTVNGAVARPLTVTVPIGMSLHEVLVLAGGATVDDPGFINGGPMMGGLITSLDNPVTKTTGGLLVLPKNHPLIQRRIQDERTVLSVARTVCEQCRLCTDLCPRHLIGHELSPHLLVLVRAVNFHQHLLVRAVNFHQAATPQLLLSALTCSECNVCESVACPVGISPMRINRMLKRELRAQNQRYEGPLNPADEMAKYRLVPVKRLIAKLGLSPWYQEAPLVEEEPSVKKVTLQLRQHIGANAVPTVAVGERVTRGQCVADVPPGALGTPIHASIDGIVSAISEQAITVVRG

>LTSEMIN_3213
PRAAKRYARLAKACGFCPAEANDVAAINALIQQIELLKQRCALPSLAVALKEGRSDFSARIPAMVQAALADVTLRTNPRPANAEAIRELLEELL

>LTSEMIN_3215
MNTSELETLIRTILSEQLTTPAQTPAQPQGKGIFQSVSEAIDAAHQAFLRYQQCPLKTRSAIISAMRQELTPLLAALAEESANETGMGNKEDKFLKNKAALDNTPGVEDLTTTALTGDGGMVLFEYSPFGVIGSVAPSTNPTETIINNSISMLAAGNSIYFSPHPGAKKVSLKLISLIEEIAFRCCGIRNLVVTVAEPTFEATQQMMAHPRIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIINGASFDYNLPCIAEKSLIVVESVAERLVQQMQTFGALLLSPADTDKLRAVCLPEGQANKKLVGKSPSAMLEAAGIAVPAKAPRLLIAVVNADDPWVTSEQLMPMLPVVKVSDFDSALALALKVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARSRRCVLTNGFSIR

>LTSEMIN_3216
MKTATHELSDAVQPGAALYGLESHLQGKVVTFGGGYALWRDGILIGGLGISGGSVEQDMDIAQTAIAAINVGTHQ

>LTSEMIN_3218
MAIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLCACAAADENHRTLLEAIQQQLFWFSAELACDSEQPSPKQRYISSEEISALEAAIDRAMARVEPLHSFILPGRCEAASRLHFARTLARRRTPSG

>LTSEMIN_3219
MHLARVTGAVVSTQKSPSLIGKKLLLVRRVSADGELPASPTSGDEVAVDSVGAGIGELVLLSGGSSARHVFSGPNEAIDLAVVGIVDTLSR

>LTSEMIN_3220
MNGETLQRIVEEIVSRLHRRAQSTATLSVTQLRDADCPALFCQHASLRILLVDLPLLSQLADAETDDAAARKIHDALAFGIRVQLSLHSQLLPVIPVKKLARLPLVFTDEHGLPLVLHAGSVLSYRDVALLSRGRVVVHRKCIVTAMARDAANARNIQLIKQE

>LTSEMIN_3221
MDKELLQSTVSKVLDEMRLRPIPLGVSNRHIHLSAQDYERLFPGHPISEKKALLQPGQYAAEQTVTLVGPKGQLKNVRLLGPLRSVSQVEISRTDARTLGIAAPLRMSGNLKGTPGIRLVSPFGELELPSGVIVAQRHIHMSPLDALILRVSHGDRVSVAIEGDERGLIFNNVAIRVSPDMRLEMHIDTDEANAAGADNPQAFARLVGPR

>LTSEMIN_3222
MKQSLGLLEVCGLALAISCADIMAKSASITLLALEKTNGSGWMVIKITGDVASVQAAITTGAHFAKQRNGLVAHKVIARPGEGILLAEPPPPSVIEPEPEASEIADVVSEATAEEAPQESELVSCNLCLDPKCPRQKGEPRTLCIHPGKRGEA

>LTSEMIN_3223
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSAAASVVGEVKSCHVIPRPHSDVEAILPKSA

>LTSEMIN_3224
MDSNHSAPAIVITVISDCASLWHEVLLGIEEEGIPFLLQHHPAGEVVDSAWQAARSSPLLVGIACDRHTLVVHYKNLPASAPLFTLMHHQDSQAHRNTGNNAARLVKGIPFRDLNS

>LTSEMIN_3225
RALIGNRSAVVVKTPSGDVKARAIPAGNLELQAQGRTVRVDVAAGAEAIMKAVDGCGKLDNVTGEAGTNIGGMLEHVRQTMAELTNKPSSEIFIQDLLAVDTSVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMAMIARQIEQKLNIDVQIGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGEIIATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFPTPLPPAVFARVCVVKPDELVPLPGDLALEKVRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGSEGPPA

>LTSEMIN_3228
MNTDAIESMVRDVLSRMNSLQGDAPAAAPAAGGTSRSAKVSDYPLANKHPEWVKTATNKTLDDFTLENVLSNKVTAQDMRITPETLRLQASIAKDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTKEELFAIADDLENRYQAKICAAFVREAAGLYVERKKLKGDD

>LTSEMIN_3229
MEINEKLLRQIIEDVLRDMKGSDKPVSFNAPAASTAPQTAAPAGDGFLTEVGEARQGTQQDEVIIAVGPAFGLAQTVNIVGLPHKSILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQQGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL

>LTSEMIN_3230
MLLKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAQGGFTDVAQDMLNIQKAKLTGDYLHTSAIIVGDGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNEID

>LTSEMIN_3231
MNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGAVTELDGKPVSEFDLIDHFIARYGINLNRAEEVMAMDSVKLANMLCDPNVKRSEIVPQTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLRI

>LTSEMIN_3232
ACGVIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVTSAREIG

>LTSEMIN_3233
MSSNELVEQIMAQVIARVATPEQQAIPGQPQPIRETAMAEKSCSLTEFVGTAIGDTLGLVIANVDTALLDAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKVL

>LTSEMIN_3234
MVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKGISQ

>LTSEMIN_3235
MAKDAKCDAYSKLISWLVQYFIISTGVFYSSNFPCDGLIKISEKQNF

>LTSEMIN_3236
MNDSLKAQCGAEFLGTGLFLFFGIGCLSALKVAGASLGLWEICIIWGLGISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGALLAYVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGIPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFTWLAGWGNMAMSGGREIPYFIVPIVAPVIGACAGAAIYRYFIGKNLPCNRCEL

>LTSEMIN_3237
MISASALNSELINKIAQDFAQATGLAVVVVNIHGDEISELFNFTPFCQLMRQHPQHSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDVELVNILNVDDRWQADPELLNEFRNVPEMDYSRVIASADLLKLIVENCLKKQLNFVVIKDNPQQSEANKAARGPTPHDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAWVNRQRMVSARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAYRQQINENS

>LTSEMIN_3238
MAARHHAFILAGTGSGCGKTTVTLGLLRLLQKRALRVQPFKVGPDYLDTGWHTAICGVASRNLDSFMLPPPVLNALFCEQMRQADIAVIEGVMGLYDGYGVDP

>LTSEMIN_3239
MAKQLGCPVILLVDGKAVSTSLAATVMGFQHFDPTLNLAGVIVNRVTSDAHYQLLKNAIEHYCSLPVLGYVPPCDGVAWGMSLLATA

>LTSEMIN_3240
MITARESLVNQQSWHDFAATLEQTVDVDALLSLSVLSALPTGMWPERPDNTAGAGLTLALADDEAFNFYYPDNIDLLERASVNIVRFSPLHDRALPDCQMIWLGGGYPELYAAELAANTAMLKHLRAAHQRGVAIYAECGGLMYLGSTLEDSGGEIHQMANIIPGHSKMGKRLTRFGYCEAQAMQPTLLAVPGEIVRGHEFHYSDFIPETPAVMACRKVRDGRVLQEWTGGWQTGNTFASYLHVHFAQRPEMLQHWLAAARRIL

>LTSEMIN_3241
MTILAWCIAWVLDFIIGDPQHWPHPVRWIGRLITFVQRIVRRYCPGDKALRIGGGVMWVVVVGATWGVAWGVLALAQRIHPWFGWSVEVWMIFTTLAGRSLARAAQEVERPLRENDLAESRIKLSWIVGRDTSQLQPAQINRAVVETVAENTVDGIIAP

>LTSEMIN_3242
QKTPLTALSRPLAMAYKAVNTLDSMVGYKHEKYRAIGMVSARMDDVANYLPARLSWLLLGIAAGLCRLSGWRALRIGWRDRYNHSSPNCAWSEACVAGALGIQLGGPNNYFGERVDKPWIGDAQRDISVDDISRTIRLMWVASTLALALFIVARCGLSGVA

>LTSEMIN_3243
MHYIQQPQTIEANSFTIISDIIRETRPDYRFASPLHEAIIKRVIHTTADFDWLDILWFSADALEQLCDALRQPCIIYTDTTMALSGINKRLLATFGGECRCYISDPRVVRAAKTQGITRSMAAVDIAIAEEEKNKLFVFGNAPTALFRLLEHNVTVSGVVGVPVGFVGAAESKEALTHSHFPAVAALGRKGGSNVAAAIVNALLYHLREA

>LTSEMIN_3244
MSELSFDAPVWHHGKALRKGYTTGSCATAAAKVAALMVLRQHLIHQVSIVTPSGVTLCLNVESPHIEGQQAIAAIRKDGGDDVDATHGMLIFARVTLNDSGEITLTGGEGIGTVTRKGVGLPLGSAAINRTPRHTIESAVREAIGPARGADVEIFAPEGEVRAQKTYNSRLGILGGISIIGTTGIVTPMSEESWKRSLSLELEIKRASGLTRVILVPGNHGE

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
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