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BMC type: PDU1AB


Organism: Salmonella enterica subsp. enterica serovar Alachua str. R6-377. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

      LTSEALA_3005 (fasta)
             LTSEALA_3006 (fasta)
              LTSEALA_3009 (fasta)
                LTSEALA_3011 (fasta)
                 LTSEALA_3012 (fasta)
                     LTSEALA_3014 (fasta)
                        LTSEALA_3015 (fasta)
                            LTSEALA_3016 (fasta)
                               LTSEALA_3017 (fasta)
                                    LTSEALA_3020 (fasta)
                                     LTSEALA_3021 (fasta) H_robinEggBlue GRM3A (details)
                                        LTSEALA_3022 (fasta) Tsp_greenishBeige PDU1AB (details)
                                          LTSEALA_3023 (fasta) Tsp_greenishBeige GRM4 (details)
                                              LTSEALA_3024 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                                      LTSEALA_3025 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                                       LTSEALA_3026 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                                                        LTSEALA_3027 (fasta)
                                                            LTSEALA_3028 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                                                               LTSEALA_3029 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                                                                 LTSEALA_3030 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                                                  LTSEALA_3031 (fasta) H_tan PDU1AB (details)
                                                                   LTSEALA_3034 (fasta) H_tan PDU1AB (details)
                                                                      LTSEALA_3035 (fasta) H_driedBlood PDU1AB (details)
                                                                          LTSEALA_3036 (fasta) HMMptac_2_mix PDU1AB (details)
                                                                              LTSEALA_3037 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                                               LTSEALA_3038 (fasta) P_babyPink PDU1AB (details)
                                                                                LTSEALA_3039 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                                      LTSEALA_3040 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                                                LTSEALA_3041 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                                                                 LTSEALA_3042 (fasta)
                                                                                                     LTSEALA_3043 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                                                                       LTSEALA_3044 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                                                                          LTSEALA_3045 (fasta) HMMPduS_1_all PDU1AB (details)
                                                                                                                LTSEALA_3046 (fasta) HMMPduS_1_all PDU1AB (details)
                                                                                                                   LTSEALA_3047 (fasta) Ts_dodgerBlue PDU1AB (details)
                                                                                                                     LTSEALA_3048 (fasta) Hp_euts_babyPurple PDU1AB (details)
                                                                                                                        LTSEALA_3049 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                                                                                                                                 LTSEALA_3050 (fasta) HMMacetkin_1 PDU1AB (details)
                                                                                                                                       LTSEALA_3051 (fasta) HMM00288_1_pdu PDU1AB (details)
                                                                                                                                         LTSEALA_3052 (fasta)
                                                                                                                                                LTSEALA_3053 (fasta)
                                                                                                                                                   LTSEALA_3054 (fasta)
                                                                                                                                                    LTSEALA_3055 (fasta)
                                                                                                                                                      LTSEALA_3059 (fasta)
                                                                                                                                                       LTSEALA_3060 (fasta)
                                                                                                                                                        LTSEALA_3061 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_robinEggBlue
       H_driedBlood
      2x H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

      2x Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>LTSEALA_3005
MEAIEALQAAEIVVGYKTYTHLVKAFTGDKQVIKTGMCKEIERCQAAIELAQAGHNVALISSGDAGIYGMAGLVLELVGKQKLDVEVRLIPGMTASIAAASLLGAPLMHDFCHISLSDLLTPWPVIEKRIVAAGEADFVICFYNPRSRGREGHLARAFDLLAASKSAQTPVGVVKSAGRKKEEKWLTTLGDMDFEPVDMTSLVIVGNKTTYVQDGLMITPRGYTL

>LTSEALA_3006
MFCLTPGGVALAKRLAAMLPLTCFTSEKLREEGFIPFDGGFANTARQAFTTYTALIFIGATGIAVRVLAPLVNDKFSDPAVVVIDERGQHVISLLSGHAGGANALTRYLAGMLGADPVITTATDVNEMSALDTLAFQLNARMTDLRTAVKTVNQMLVSHQRVGLWWDAELTEEIGQCDIRGFIPVDDLQRLPELDALICVSLRNDLPELPVPHWKLVPQRVVAGIGCRRDTPFPLLATLLARQLEAQKLDPLALKAIGSVTLKKGEPGLIQLASCCRVPFKTFTAEALREFEHHFPGSGFVRKTVGVGSVSGPAAWLLSQGQLLGETLREQGVTITLGVAH

>LTSEALA_3009
MVIGENLAMENERIHWLPVSAVNADYEMNAVVILDER

>LTSEALA_3011
MLVGHPGKLIKIAAGIFHTHSHIADARMETLVAHLALLGAPLELLTLVGDCDTTEAAMEHIEAYGFGHIYNHLARRICLRVMQMLRFTKTPPVCDAILFSFDNHILGSNRPVDEIAKELQC

>LTSEALA_3012
VILVPGNHGETNGRRHTGGRHHEQFCRLHD

>LTSEALA_3014
MHYIQQPQTIEANSFTIISDIIRETRPDYRFASPLHEAIIKRVIHTTADFDWLDILWFSADALEQLCDALRQPGIIYTDTTMALSGINKRLLATFGGECRCYISDPRVVRAAKTQGITRSMAAVDIAIAEEEKNKLFVFGNAPTALFRLLEHNVTVSGVVGVPVGFVGAAESKEALTHSHFPAVAALGRKGGSNVAAAIVNALLYHLREA

>LTSEALA_3015
VDGIIAPLAPLAMAYKAVNTLDSMVGYKHEKYRAIGMVSARMDDVANYLPARLSWLLLGIAAGLCRLSGWRALRIGWRDRYNHSSPNCAWSEACVAGALGIQLGGPNNYFGERVDKPWIGDAQRDISVDDISRTTRLMWVASTLALALFIAARCGLSGVA

>LTSEALA_3016
MDWRLADRQHVCQLSARPFRPASGNVAALAGGGEARIMTILAWCIAWVLDFIIGDPQHWPHPVRWIGRLITFVQRIVRRYCPGDKALRIGGGVMWVVVVGATWGVAWGVLALAQRIHPWFGWSVEVWMIFTTLAGRSLAHAAQEVERPLRKNDLAESRIKLSWIVGRDTSQLQPAQINRGVVETVAENTVDGIIAPLFFXHTLN

>LTSEALA_3017
MIWLGGGYPELYAADLAANTVMLKHLRAAHQRGVAIYAECGGLMYLGSTLEDSGGEIHQMANIIPGHSKMGKRLTRFGYCEAQAMQPTLLAAPGEIVRGHEFHYSDFIPETPAVMACRKVRDGRVLQEWTGGWQTGNTFASYLHVHFAQRPEMLQHWLAAARRVL

>LTSEALA_3020
FFGIGCLSALKVAGASLGLWEICIIWGLGISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGALLAYVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGIPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFTWLAGWGNMAMSGGREIPYFIVPIVAPVIGACAGAAIYRYFIGKNLPCNRCEL

>LTSEALA_3021
MMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKGISQ

>LTSEALA_3022
MSSNELVEQIMAQVIARVATPEQQAIPGQPQPIRETAMAEKSCSLTEFVGTAIGDTLGLVIANVDTALLDAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALM

>LTSEALA_3023
APIGRACGVIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVTSAREIGKTVLATLGSEPEPKNDRPSYGSEPKNDRPSYI

>LTSEALA_3024
MNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGAVTELDGKPVSEFDLIDHFIARYGINLNRAEEVMAMDSIKLANMLCDPNVKRSEIVPLTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLLKLGMLGHTWS

>LTSEALA_3025
MLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAQGGFTDVAQDMLNIQKAKLTGDYLHTSAIIVIVGDGQVLSAIIVGDGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNEID

>LTSEALA_3026
MEINEKLLRQIIEDVLRDMKGSDKPVSFNTPAASTAPQTAAPATGMSLIIPM

>LTSEALA_3027
MRYIAGIDIGNSSTEVALARQDETGALTITHSALV

>LTSEALA_3028
APAGDGFLTEVGEARQGTQQDEVIIAVGPAFGLAQTVNIVGLPHKSILREVIAGIEEEGIRARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQQGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL

>LTSEALA_3029
MNSLQGDAPAAAPAAGGTSRSAKVSDYPLANKHPEWVKTATNKTLDDFTLENVLSNKVTAQDMRITPETLRLQASIAKNAGRDNFERAAELTAVPDDRILEIYNALRPYRSTKEELLAIADDLENRYQAKICAAFVREAAGLYVERKKLKGDD

>LTSEALA_3030
MDSNHSAPAIVITVINDCASLWHEVLLGIEEEGIPFLLQHHPAGDVVDSAWQAARSSPLLVGIACDRHSLVVHYKNLPASAPLFTLMHHQDSQAHRNTGNNAARLVKGERP

>LTSEALA_3031
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSAAASVAGGNDRDQ

>LTSEALA_3034
AAASVVGEVKSCHVIPRPHSDVEAILPKSA

>LTSEALA_3035
MKQSLGLLEVCGLALAISCADIMAKSASITLLALEKTNGSGWMVIKITGDVASVQAAITTGAHFAEQRNGLVAHKVIARPGEGILLAETPPPSVIGPEPEASEIAAVVSEAPAEKAPQESELVSCNLCLDPKCPRQKGEPRTLCIHSGKRGEA

>LTSEALA_3036
MDKELLQSTVSKVLDEMRQRPIPLGVSNRHIHLSAQDYERLFPGHPISEKKALLQPGQYAAEQTVTLVGPKGQLKNVRLLGPLRSVSQVEISRTDARTLGIAAPLRMSGNLKGTPGIRLVSPFAELELPSGVIVAQRHIHMSPLDALILRVSHGDMVSVAIEGDDRGLIFNNVAIRVSPDMRLEMHIDTDEANAAGADNPQAFARLVGPR

>LTSEALA_3037
MNGETLQRIVEEIVSRLQRRAQSTGPEHGDAERYRAQSTATLSVTQLRDADCPALFCQHASLRILLVDLPLLGQLADAETDDAAARKIHDALAFGIRVQLSLHSQLLPVIPVKKLARLPLVFTDEHGLPLVLHAGSVLSYRDVALLSRGRVVVHRKCIVTAMARDAANARNIQLIKQE

>LTSEALA_3038
MDSVGAGVGELVLLSGGSSARHVFSGPNEAIDLAVVGIVDTLSR

>LTSEALA_3039
MAIYTRTGDAGTTSLFTGQRVSKTHIVRLVHN

>LTSEALA_3040
YGTLDELNAALSLCACAAADENHRTLLEAIQQQLFWFSAELASDSEQPSPKQRYISSEEISALEAAIDRAMARVEPLHSFILPGRCEAASRLHFARTLARRAERRLVELATEVNVRQVLMRYINRLSDCLYALARAEDSDAHQANIIREVSKRYLAASQPTRSKETTPVALSFHDLHQLTRAAVERAQQLQVPVVVSIVDAHGTETVTWRMPDALLVSSELAPKKAWTAVAMKTATHELSDVVQPGAALYGLESHLQGKVVTFGGGYALWRDGILIGGLGISGGSVEQDMDIAQTAIAAINVGTHQ

>LTSEALA_3041
MNTSELETLIRTILSEQLTTPAQTPAQPQGKGIFQSVSEAIDAAHQAFLRYQQCPLKTRSAIISAMRQELTPLLAPLAEESANETGMGNKEDKFLKNKAALDNTPGVEDLTTTALTGDGGMVLFEYSPFGVIGSVAPSTNPTETIINNSISMLAAGNSIYFSPHPGAKKVSLKLISLIEEIAFRCCGIRNLVVTVAEPTFEATQQMMAHPRIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIINGASFDYNLPCIAEKSLIVVESVAERLVQQMQTFGALLLSPADTDKLRAVCLPEGQANKKLVGKSPSAMLEAAGIAVPAKAPRLLIAVVNADDPWVTSEQLMPMLPVVKVSDFDSALALALKVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARSRRCVLTNGFSIR

>LTSEALA_3042
MDGGVRRYLAKDADAVICGQRVTQGIQQRRASQKAIADYPDVLIGKALEHSQAALTAVQPRL

>LTSEALA_3043
MQALQPQVVIGFGGGSAMDAAKAIVWFSQQSGINIETCVAIPTTSGTGSEVTSACVISDPDKGIKYPLFNNALYPDMAILDPELVVSVPPQITANTGMDVLTHALEAWVSPHASDFTDALAEKAAKMVFQYLPTAVEKGDCVATRGKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTTVIRFNAGRSARRQTL

>LTSEALA_3044
AGVPRAAKRYARLAKACGFCPAEANDIAAINALIQQIELLKQRCALPSLAVALKEGRTDFSARIPAMVQAALADVTLRTNPRPANAEAIRELLEELL

>LTSEALA_3045
MSTAINSVEMSLSADEIRERVRAAGVVGAGGAGFPAHVKLQAQVEIFLVNAAECEPMLKVDQQLMWQQAARLVRGVQYAMTATGAREGVIALKEKYRRAIDALTPQLPAGIRLHILPDVYPAGDEVLTIWMATGRRVQTVLNIARAV

>LTSEALA_3046
QTVLNIARAVEQQFPVTRRTLTVNGAVARPLTVTVPVGMSLHEVLALAGGATVDDPGFINGGPMMGGLITSLDNPVTKTTGGLLVLPKSHPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNFHQAATPQLLLSALTCSECNVCESVACPVGISPMRINRMLKRELRAQNQRYEGPLNPADEMAKYRLVPVKRLIAKLGLSPWYQEAPLVEEEPSVEKVTLQLRQHIGASAVPTVAVGERVTRGQCVADVPPGALGAPIHASIDGVVSAISEQAITVVRG

>LTSEALA_3047
MELGDAMLKSANVDLLVSKTICPGKFLLMLGGDIGAIQQAIETGTSQAGEMLVDSLVLANIHPSVLPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEKGLLVYRSVIPRPHEAMWRQMVEG

>LTSEALA_3048
MPGKQVTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLGEMMQFTTCSITRT

>LTSEALA_3049
MKRLMFIGPSQCGKTSLTQSLRGEALHYKKTQAIEWSPMAIDTPGEYLENRCLYSALLTSACEADVIALVLNADAQWSPFSPGFTAPMNRPTIGLVTKADLADPQRISLVAEWLTQAGAQQIFITSARPLTPAAHR

>LTSEALA_3050
MAINAGSSSLKFQLLEMPQGDMLCQGLIERIGMADAQVTIKTHSQKWQETVPVADHRDAVTLLLEKLLGYQIINSLRDIDGVGHRVAHGGEFFKDSTLVTDETLAQIERLAELAPLHNPVNALGIHIFRQLLPDAPSVAVFDTAFHQTLDEPAYIYPLPWHYYAELGIRRYGFHGTSHKYVSGVLAEKLGVPLSALRVICCHLGNGSSVCAIKNGRSVNTSMGFTPQSGVMMGTRSGDIDPSILPWIAQRESKTPQQLNQLLNNESGLLGVSGVSSDYRDVEQAANTGNRQAKLALTLFAERIRATIGSYIMQMGGLDALVFTGGIGENSARARSAVCHNLQFLGLAVDEEKNQRNATFIQTENALVKVAVINTNEELMIAQDVMRIALPATEGLCVPA

>LTSEALA_3051
MRAHYSYLKGDNVAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVAVTAAPPLVNERPLSRAMVERVLAHWQYPAHWSNEIRVDVRSSIPVAKGMASSTADIAATAVATAHHLGHSLDETTLAQLCVSIEPTDSTVFHQLTLFDHNNAATQIACEPPPPIDLLVLESPVTLRTQDYHRLPRQQKLIASSPTLQQAWNLVQEACITQNPLRLGEAATLSAIASQTLLPKPGFTALLSLVEECDLYGLNVAHSGSVMGLMLDRKRHDIARLKGKLAEKKLTRHWPKQHLLKMVTGGVKLQ

>LTSEALA_3052
MLNESESHIIRGVKMETTKPSFQDVLEFVRLFRRKNKLQREIQDIEKKIRDNQKRVLLLDNLSDYIKPGMSVEAIQGIIASMKSDYEDRVDDYIIKNAEISKERRDISKKLKAMGEMKHADVKAE

>LTSEALA_3053
MRADKSLSPFEIRLYRHYRIVHGIRIALAFILTFLLVRLFSIPEGTWPLITLVVIMGPISFWGNVVPRAFERIGGTILGAALGLVALRLELFSLPLMLVWCAIAMFLCGWLALGKKPYQALLIGITLAVVVGAPAGDMNTALWRGGDVILGSLLAMLFTGIWPQRAFLHWRIQLAHCVTAYNRVYQAALSPNLLERPRLDKHLQRLLNDVVKMRGLITPASKETRIQKSIFEAIQTINRNLVCMLELQINAHWATRASHFVMLNAHTLRETQQMTQQTLLTIAHALFEGNPQPVLANTGKLNDIAAELRQLMNEQQGDAVAETPIHGYVWLSMETARQLELLSHLICRALRK

>LTSEALA_3054
MDYEIRQEQKRKIAGFHMVGPWEHTVKQGFEQLMTWVDRQRIVPVEWIAVYYDNPDVVPAEKLRCDTVVSVAENFILPDNSEGVIVTAIEGGEYATAVARVEDRDFAKPWERFFDVLEQDSAYQIASAPCFETYLNNGMEDGYWDIEMYIPVQRK

>LTSEALA_3055
TEQDFWMAEIPHIKAKYVLDRKELEAPIAAHQRVGEIELYDRDKLIAQWPLVTLESVGKGGMFSRLSDYFQHKA

>LTSEALA_3059
MKGEAHPFAATEQNKFNPLQQLAYLAIMYALVPLLIITGLLCLYPQVAGLGPVMLVLHMALAIIGLLFICAHLYLCTLGDTPGQIFRSMVDGYHRHRTAPRGDKSAV

>LTSEALA_3060
MRYLNPQTGVADKCNFCADTRLAAGQSPACVSVCPTDALKFGRLDESEIQRWVGQKEVYRQQEARSGAVSLYRRKEVHQEGKA

>LTSEALA_3061
MYLYAAKSLRYVIKHFAGNGTRLAADTTFFIMQHDVLIR

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021