BMC type: PDU1AB


Organism: Salmonella enterica subsp. enterica serovar Adelaide str. A4-669. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

  LTSEADE_3036 (fasta)
         LTSEADE_3038 (fasta)
             LTSEADE_3041 (fasta)
               LTSEADE_3042 (fasta)
                   LTSEADE_3044 (fasta)
                      LTSEADE_3045 (fasta)
                       LTSEADE_3049 (fasta)
                           LTSEADE_3050 (fasta) HMM10114PocR_1_pdu1 PDU1AB (details)
                            LTSEADE_3051 (fasta)
                                 LTSEADE_3052 (fasta)
                                  LTSEADE_3055 (fasta) H_robinEggBlue PDU1D (details)
                                     LTSEADE_3056 (fasta) Tsp_greenishBeige PDU1AB (details)
                                       LTSEADE_3057 (fasta) Tsp_greenishBeige GRM4 (details)
                                                  LTSEADE_3058 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                                      LTSEADE_3059 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                                                         LTSEADE_3060 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                                                          LTSEADE_3061 (fasta)
                                                              LTSEADE_3062 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                                      LTSEADE_3063 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                                        LTSEADE_3064 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                                                         LTSEADE_3065 (fasta) H_tan PDU1AB (details)
                                                                            LTSEADE_3066 (fasta) H_driedBlood PDU1AB (details)
                                                                                LTSEADE_3067 (fasta) HMMptac_2_mix PDU1AB (details)
                                                                                   LTSEADE_3068 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                                                    LTSEADE_3069 (fasta) P_babyPink PDU1AB (details)
                                                                                          LTSEADE_3070 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                                                   LTSEADE_3071 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                                                                          LTSEADE_3072 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                                                                             LTSEADE_3073 (fasta) HMMPduS_1_all PDU1AB (details)
                                                                                                                   LTSEADE_3074 (fasta) HMMPduS_1_all PDU1AB (details)
                                                                                                                      LTSEADE_3075 (fasta) Ts_dodgerBlue PDU1AB (details)
                                                                                                                        LTSEADE_3076 (fasta) Hp_euts_babyPurple PDU1AB (details)
                                                                                                                           LTSEADE_3077 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                                                                                                                                LTSEADE_3078 (fasta) HMMacetkin_1 PDU1AB (details)
                                                                                                                                 LTSEADE_3079 (fasta)
                                                                                                                                  LTSEADE_3080 (fasta)
                                                                                                                                        LTSEADE_3081 (fasta)
                                                                                                                                              LTSEADE_3082 (fasta)
                                                                                                                                                    LTSEADE_3083 (fasta)
                                                                                                                                                     LTSEADE_3084 (fasta)
                                                                                                                                                       LTSEADE_3085 (fasta)
                                                                                                                                                         LTSEADE_3086 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_robinEggBlue
       H_driedBlood
       H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

      2x Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>LTSEADE_3036
FSADFNAAFYHQCRADVVITKASGAEGGYQEKVQPCLDAGIPCIVIARPTPLVTGDELLESQAAFAQRLSRWLAAAKE

>LTSEADE_3038
MFCLTPGGVALAKRLSAMLPLTCFTSEKLREEGFIPFDGGFANTARQAFTTYTALIFIGATGIAVRVLAPLVNDKFSDPAVVVIDERGQHVISLLSGHAGGANALTRYLAGMLGADPVITTATDVNEMSALDTLAFQLNARMSDLRTAVKTVNQMLVSHQRVGLWWDAELTEEIGQCDIRGFIPVDDLQRLPELDALICVSLRNDLPELPVLHWKLVPQRVVAGIGCRRDTPFPLLATLLARQLEAQKLDPLALKAIGSVTLKKGEPGLIQLASCCRVPFKTFTAEALREFEHHFPGSGFVRKTVGVGSVSGPAAWLLSQGQLLGETLREQGVTITLGVAH

>LTSEADE_3041
MLTVVGMGPAGRHLMTPAALEAIDHADALAGGKRHLAQFPAFGGERFTLGADIGALLSWIAARRDKGIVVLASGDPLFYGIGTRLVAHFGIEQVRIIPGISAVQYLCAQAGIDMNDMWLTSSHGRCVSFEQLANHRKVAMVTDACCGPREIARELVARGKGHRLMVIGENLAMENERIHWLPVSAVNADYEMNAVVILDER

>LTSEADE_3042
MSNFVGYMIEEAVRLGFCQIVLVGHPGKLIKIAAGIFHTHSHIADARMETLVAHLALLGAPLELLTLVGDCDTTEAAMEHIEAYGFGHIYNHLARRICLRVMQMLRFTKTPPVCDAILFSFDNHILGSNRPVDEIAKELQC

>LTSEADE_3044
MHYIQQPQTIEANSFTIISDIIRETRPDYRFASPLHEAIIKRVIHTTSDFDWLDILWFSADALEQLCDALRQPCIIYTDTTMALSGINKRLLATFGGECRCYISDPRVVRAAKTQGITRSMAAVDIAIAEDEKNKLFVFGNAPTALFRLLEHNVTVSGVVGVPVGFVGAAESKEALTHSHFPAVAALGRKGGSNVAAAIVNALLYHLRGA

>LTSEADE_3045
SFSSFSAGAPLAMAYKAVNTLDSMVGYKHEKYRAIGMVSARMDDVANYLPARLSWLLLGIAAGLCRLSGWRALRIGWRDRYNHSSPNCAWSEACVAGALGIQLGGPNNYFGERVDKPWIGDAQRGISVDDISRTIRLMWVASTLALALFIAARCGLSGVA

>LTSEADE_3049
MAARHHAFILAGTGSGCGKTTVTLGLLRLLQKRALRGGLSSTPIYTRAARTAV

>LTSEADE_3050
MSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDVELVNILNVDDRWQADPELLNEFRNVPEMDYSRVIASADLLKLIVENCLKKQLNFVVIKDNPQQSEVNKTARGPTPHDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAWVNRQRMVSARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAYRQQINENSHPPSL

>LTSEADE_3051
MISASALNSELINKIAQDNSELINKIYCNIKSHRILHKPPVWRLWLSIFMVMKYLSYSISRRFVS

>LTSEADE_3052
MFFGIGCLSALKVAGASLGLWEICIIWGLGISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGALLAYVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGIPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFTWLAGWGNMAMSGGREIPYFIVPIVAPVIGACAGAAIYRYFIGKNLPCNRCEL

>LTSEADE_3055
MVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKGISQ

>LTSEADE_3056
MSSNELVEQIMAQVIARVATPEQQAIPGQPQPIRETAMAEKSCSLTEFVGTAIGDTLGLVIANVDTALLDAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKRLRRHRRRS

>LTSEADE_3057
RACGVIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVTSAREIGKTVLATLGSEPVLNRKTIARPSVLNRKTIARPTSDTHEADS

>LTSEADE_3058
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGAVTELDGKPVSEFDLIDHFIARYGINLNRAEEVMAMDSVKLANMLCDPNVKRSEIVPLTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAQGGFTDVAQDMLNIQKAKLTGDYLHTSAIIVGDGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNEID

>LTSEADE_3059
MEINEKLLRQIIEDVLRDMKGSDKPVSFNAPAASTAPQTAAPAGDCFLTEVGEARQGTQQDEVIIAVGPAFGLAQTVNIVGLPHKSILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQQGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL

>LTSEADE_3060
MNTDAIESMVRDVLSRMNSLQGDAPAAAPAAGGTSRSAKVSDYPLANKHPEWVKTATNKTLDDFTLENVLSNKVTAQDMRITPETLRLQASIAKDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTKEELLAIADDLENRYQAKICAAFVREAAGLYVERKKLKGND

>LTSEADE_3061
MPNTLRNVPLIPVVSASALCVSQRAVRNRQCASLILPRQCDFR

>LTSEADE_3062
MFGIQEALALVAKRAGINVSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGAGLGVGITITPEELLTRPADSSYILVVSSAFDFADIANVINASMRAGYQITGVILQRDDGVLVSNRLEKSLPIVDEVLYIDRIPLGMLAAIEVAVPGKVIETLSNPYGIATVFNLNADETKNIVPMARRADWQPFRR

>LTSEADE_3063
PRALIGNRSAVVVKTPSGDVKARAIPAGNLELQAQGRTVRVDVAAGAEAIMKAVDGCGKLDNVTGEAGTNIGGMLEHVRQTMAELTNKPSSEIFIQDLLAVDTSVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMAMIAREIEQKLNIDVQIGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGEIIATHLAGAGDTVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFPTPLPPAVFARVCVVKPDELVPLPGDLALEKVRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGGHRPDSLLNAVATGLILSWHKEFAHGQ

>LTSEADE_3064
MDSNHSAPAIVITVINDCASLWHEVLLGIEEEGIPFLLQHHPAGDVVDSAWQAARSSPLLVGIACDRHTLVVHYKNLPASAPLFTLMHHQDSQAQRNTGNNAARLVKGIPFRDLNS

>LTSEADE_3065
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSAAASVVGEVKSCHVIPRPHSDVEAILPKSA

>LTSEADE_3066
MKQSLGLLEVCGLALAISCADIMAKSASITLLALEKTNGSGWMVIKITGDVASVQAAITTGAHFAEQRNGLVAHKVIARPGEGILLAETPPPSVIEPEPEASEIADVVSEAPAEEAPQESELVSCNLCLDPKCPRQKGEPRTLCIHSGKRGEA

>LTSEADE_3067
MDKELLQSTVSKVLDEMRQRPIPLGVSNRHIHLSAQDYERLFPGHPISEKKALLQPGQYAAEQTVTLVGPKGQLKNVRLLGPLRSVSQVEISRTDARALGIAAPLRMSGNLKGTPGIRLVSPFGELELPSGVIVAQRHIHMSPLDALILRVSHGDRVSVAIEGDDRGLIFNNVAIRVSPDMRLEMHIDTDEANAAGADNPQAFARLVGPR

>LTSEADE_3068
MNGETLQRIVEEIVSRLQRRAHSTATLSVAQLRDADCPALFCQHASLRILLVDLPLLGQLADAETDDAAARKIHDALAFGIRVQLSLHSQLLPVIPVKKLARLPLVFTDEHGLPLVLHAGSVLSYRDVALLSRGRVVVHRKCIVTAMARDAANARNIQLIKQE

>LTSEADE_3069
MHLARVTGAVVSTQKSPSLIGKKLLLVRRVSADGELPASPTSGDEVAVDSVGAGVGELVLLSGGSSARHVFSGPNEAIDLAVVGIVDTLSR

>LTSEADE_3070
MAIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLCACAAADENHRTLLEAIQQQLFWFSAELASDSEQPSPKQRYISSEEISALEAAIDRAMARVEPLHSFILPGRCEAASRLHFARTLARRAERRLVELATEVNVRQVLMRYINRLSDCLYALARAEDSDAHQANIIREVSKRYLAASQPTRSKETTPVALSFHDLHQLTRAAVERAQQLQVPVVVSIVDAHGTETVTWRMPDALLVSSELAPKKAWTAVAMKTATHELSDVVQPGAALYGLESHLQGKVVTFGGGYALWRDGILIGGLGISGGSVEQDMDIAQTAIAAINVGTHQ

>LTSEADE_3071
MNTSELETLIRTILSEQLTTPAQTPAQPQGKGIFQSVSEAIDAAHQAFLRYQQCPLKTRSAIISAMRQELTPLLATLAEESANETGMGNKEDKFLKNKAALDNTPGVEDLTTTALTGDGGMVLFEYSPFGVIGSVAPSTNPTETIINNSISMLAAGNSIYFSPHPGAKKVSLKLISLIEEIAFRCCGIRNLVVTVAEPTFEATQQMMAHPRIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIINGASFDYNLPCIAEKSLIVVESVAERLVQQMQTFGALLLSPADTDKLRAVCLPEGQANKKLVGKSPSAMLEAAGIAVPAKAPRLLIALVNADDPWVTSEQLMPMLPVVKVSDFDSALALALKVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARSRRCVLTNGFSIR

>LTSEADE_3072
MNTFSLQTRLYSGQGSLAVLKRFTNKHIWIICDGFLARSPLLDTLRNALPADNRISVFSEITPDPTIHTVVQGIAQMQALQPQVVIGFGGGSAMDAAKAIVWFSQQSGINIETCVAIPTTSGTGSEVTSACVISDPDKGIKYPLFNNALYPDMAILDPELVVSVPPQITANTGMDVLTHALEAWVSPRASDFTDALAEKAARLVFQYLPTAVEKGDCVATRGKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTTVIRFNAGDPRAAKRYARMAKACGFCPAEANDIAAINALIQQIELLKQRCVLPSLAVALKEGRSDFSARIPAMVQAALADVTLRTNPRPANAEAIRELLEELL

>LTSEADE_3073
MSTAVNVVEMSHSADEIRERVRAAGVVGAGGAGFPAHVKLQAQVEIFLVNAAECEPMLKVDQQLMWQQAARFVRGVQYAMTATGAREGVIALKEKYRRAIDALTPQLPAGIRLHILPDVYPAGDEVLTIWMATGRRVAPAALPTSVGVVVNNVQTVLNIAQSSSSFR

>LTSEADE_3074
ARAVEQQFPVTRRTLTVNGAVARPLTVTVPIGMSLREVLALAGGATVDDPGFINGGPMMGGLITSLDNPVTKTTGGLLVLPKSHPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNFHQAATPQLLLSALTCSECNVCESVACPVGISPMRINRMLKRELRAQNQRYEGPLNPADEMAKYRLVPVKRLIAKLGLSPWYQEAPLVEEEPSVEKVTLQLRQHIGASAVPTVAVGERVTRGQCVADVPAGALGAPIHASIDGVVSAISEQAITVVRG

>LTSEADE_3075
MSQAIGILELTSIAKGMELGDAMLKSANVDLLVSKTICPGKFLLMLGGDIGAVQQAIETGTSQAGEMLVDSLVLANIHPSVLPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEKGLLVYRSVIPRPHEAMWRQMVEG

>LTSEADE_3076
MATDGGGIMERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLGEMMQFTTCSITRT

>LTSEADE_3077
MFIGPSQCGKTSLTQSLRGEALHYKKTQAIEWSPMAIAIDTPGEYLPMAIDTPGEYLENRCLYSALLTSACEADVIALVLNADAQWSPFSPGFTVPMNRPTIGLVTKADLADPQRISLVAQWLTQAGARQIFITSALNNSGLDAVLDFLNSKEPLCLTK

>LTSEADE_3078
AINAGSSSLKFQLLEMPQGDMLCQGLIERIGMADAQVTIKTHSQKWQETVPVADHRDAVTLLLEKLLGYQIINSLRDIDGVGHRVAHGGEFFKDSTLVTDETLAQIERLAELAPLHNPVNALGIHIFRQLLPDAPSVAVFDTAFHQTLDEPAYIYPLPWHYYAELGIRRYGFHGTSHKYVSGVLAEKLGVPLSALRVICCHLGNGSSICAIKNGRSVNTSMGFTPQSGVMMGTRSGDIDPSILPWIAQRESKTPQQLNQLLNNESGLLGVLIHLKYEKNREDIGLFGIWRD

>LTSEADE_3079
MEQQKTLQTLQALPPEKVREILSQYEGKEHNFPARENDVKKAV

>LTSEADE_3080
MHMNKRTNRQDWHRADIVAELRKRNMSLAELGRSNHLSSSTLKNALDKRYPKAEKIIADALGMTPQDIWPSRY

>LTSEADE_3081
MQQGRIETSQGYFEIARPTLEAHDYDREVLWSKWDNASDSQRRLAEKWLPAVQAADEMLNQGISTKTAFATVAGHYQVSASTLRDKYYQVQKFAKPDWAAALVDGRGASRRNVHKSEFDEDAWQFLIADYLRPEKPAFRKCYERLELAAREHGWSIPSRATAFRRIQQLDEAMVVACREGEHALMHLIPAQQRTVEHLDAMQWINGDGYLHNVFVRWFNGDVIRPKTWFWQDVKTRKILGWRCDVSENIDSIRLSFMDVVTRYGIPEDFHITIDNTRGAANKWLTGGAPIATALR

>LTSEADE_3082
GAPNRYRFKVKEDDPKGLFLLMGAKMHWTSVVAGKGWGQAKPVERAFGVGGLEEYVDKHPALAGAYTGPNPQAKPDNYGDRAVDAELFLKTLAEGVAMFNARTGRETEMCGGKLSFDDVFEREYARTVVRKPTEEQKRMLLLPAEAVNVSRKGEFTLKVGGSLKGAKNVYYNMALMNAGVKKVVVRFDPQQLHSTVYCYTLDGRFICEAECLAPVAFNDAAAGREYRRRQKQLKSATKAAIKAQKQMDALEVAELLPQIAEPAAPESRVVGIFRPSGNTVQVKYQETDDEYETDRDEYLNHSLDILEQNRRKKAI

>LTSEADE_3083
MNISDIRAGLRTLVESEKTTYAQIARESGVAAGTLSAFVNNKYNGDNERVAQTLERWLENYHRAAELPEPPRFVETRTARQIWTSMRFASLTESISVICGNPGVGKTEAAREFRRTNNNVWMITITPSCASVLECLTELAYELGMNDAPRRKGPLSRALRRRLEGTQGLVIIDEADHLGAEVLEELRLLQESARIGLVLMGNHRVYSNMTGGNRTVEFARLFSRIAKRTAINKTKIDDVKAIADAWQITGENERELLQQIAQKPGALRILNHSLRLAAMTAHGKGERVNEDYLRQAFRELDLDVDISTLLRT

>LTSEADE_3084
MMVINIHDSLGIGRLINLDNVNVMESTVNGDVIFEFVDGRRLAVHVGNHHHAENVFCELNEITNATPVNQ

>LTSEADE_3085
MQRPLINKQEIKMAKVIFEFNNTENIEFQENGGFAVNMNVRLEESSPEDQTGPHDVMAGIIKSMAPEIIKKATEELLKSARELGLEAEGELFSYNPNAARH

>LTSEADE_3086
MNVKIRNEIQALIRIQERNNNGGELREFICARKVDGCDEKTYLIAFDHYSICARYCGESISRAIAFGGAFNVDLWEYVMDREYICASDPEAREMWQRIWRDYRLMAKGWAHCCYSSLALKAVQLSLRHIPASQREPLLY