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BMC type: PDU1AB


Organism: Escherichia coli MS 115-1. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       HMPREF9540_03880 (fasta) HMMreg00126_1_mix EUT2E (details)
            HMPREF9540_03882 (fasta)
                   HMPREF9540_03883 (fasta)
                       HMPREF9540_03884 (fasta)
                          HMPREF9540_03885 (fasta)
                            HMPREF9540_03886 (fasta)
                               HMPREF9540_03887 (fasta) HMM10114PocR_1_pdu1 PDU1AB (details)
                                     HMPREF9540_03888 (fasta)
                                       HMPREF9540_03889 (fasta) HMM10114PocR_1_pdu1 PDU1AB (details)
                                            HMPREF9540_03890 (fasta)
                                             HMPREF9540_03891 (fasta) H_robinEggBlue GRM4 (details)
                                                  HMPREF9540_03892 (fasta) Tsp_greenishBeige PDU1AB (details)
                                                            HMPREF9540_03893 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                                                HMPREF9540_03894 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                                                                   HMPREF9540_03895 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                                                                               HMPREF9540_03896 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                                                 HMPREF9540_03897 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                                                                  HMPREF9540_03898 (fasta) H_tan PDU1AB (details)
                                                                                    HMPREF9540_03899 (fasta) H_driedBlood PDU1AB (details)
                                                                                        HMPREF9540_03900 (fasta) HMMptac_2_mix PDU1AB (details)
                                                                                           HMPREF9540_03901 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                                                            HMPREF9540_03902 (fasta) P_babyPink PDU1AB (details)
                                                                                                  HMPREF9540_03903 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                                                           HMPREF9540_03904 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                                                                                  HMPREF9540_03905 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                                                                                          HMPREF9540_03906 (fasta) HMMPduS_1_all PDU1AB (details)
                                                                                                                             HMPREF9540_03907 (fasta) Ts_dodgerBlue PDU1AB (details)
                                                                                                                               HMPREF9540_03908 (fasta) Hp_euts_babyPurple PDU1AB (details)
                                                                                                                                HMPREF9540_03909 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                                                                                                                                  HMPREF9540_03910 (fasta)
                                                                                                                                        HMPREF9540_03911 (fasta)
                                                                                                                                           HMPREF9540_03912 (fasta)
                                                                                                                                             HMPREF9540_03913 (fasta)
                                                                                                                                              HMPREF9540_03914 (fasta)
                                                                                                                                                  HMPREF9540_03915 (fasta)
                                                                                                                                                   HMPREF9540_03916 (fasta)
                                                                                                                                                     HMPREF9540_03917 (fasta)
                                                                                                                                                         HMPREF9540_03918 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_robinEggBlue
       H_driedBlood
       H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

       Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>HMPREF9540_03880
MNFRRLKYFVKIVDIGSLTQAAEVLHIAQPALSQQVATLEGELNQQLLIRTKRGVTPTDAGKILYTHARAILRQCEQAQLAVHNVGQALSGQVSIGFAPGTAASSITMPLLQAVRAEFPEIVIYLHENSGAVLNEKLINHQLDMAVIYEHSPVAGVSSQALLKEDLFLVGTQDCPGQSVDVNAIAQMNLFLPSDYSAIRLRVDEAFSLRRLTAKVIGEIESIATLTAAIASGMGVAVLPESAARSLCGAVNGWMSRITTPSMSLSLSLNLPARANLSPQAQAVKELLMSVISSPVMEKRQWQLVS

>HMPREF9540_03882
MGQSFTVTVPDHNTQPLETFAAQYGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPATVRKGIVVNVAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYAKRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKYLFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYESDRKVPLPVTPSLRAFINGQEVDVNRANAALQRRSGMPVQISSGSRQMF

>HMPREF9540_03883
MQTLADLLNTIPAIDPAAMSRAQRHIDGLLKPVGSLGRLEALAIQLAGMPGLNGVPHVGKKAVLVMCADHGVWEEGVAISPKEVTAIQAENMTRGTTGVCVLAAQAGANVYVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRHQAEKLLLDVICYTRELAKNGVTLFGVGELGMANTTPAAAIVSTITGRAPEEVVGIGANLPTDKLANKIDVVRRAITLNQPNPQDGVDVLAKVGGFDLVGMAGVMLGAASCGLPVLLDGFLSYAAALAACQMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMEMRLGEGSGAALAMPIIEAACAIYNNMGELAASNIVLPGNTTSDLNS

>HMPREF9540_03884
MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLLGAISGLVFMVLQAWCGVPLAALFSVLVLALMTGGFHLDGLADTCDGVFSARSRDRMLEIMRDSRLGTHGGLALIFVVLAKILVLSELALRGEPILASLAAACAVSRGTAALLMYRHRYAREEGLGNVFIGKIDGRQTCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQLLKRTLGGQTGDTLGAAIELGELVFLLALL

>HMPREF9540_03885
MMILVTGGARSGKSRHAEALIGDSSQVLYIATSQILDDEMAARIEHHRQGRPAHWHTVERWQHLDELIHADINPHEAVLLECVTTMVTNLLFDYGGDKDPDEWDYQAMEQAINAEIQSLIAACQRCPAKVVLVTNEVGMGIVPESRLARHFRDIAGRVNQQLAAAANEVWLVVSGIGVKIK

>HMPREF9540_03886
MKTIKPESIALFCLLSGDVDLAKHLAEILPITCFVGEDWQQDFQPLDGGPVQSLSDAYSDYSVLLLIAAESEISVPEWLAHSEGTTVILIAEHNARLLTGPAGGAVALIHYLNEICHSRETAVNDAFCRTLTRGSLAIPQCHLLL

>HMPREF9540_03887
MASADLLKLIVENCLKKQLNFVVIKENKSRSDSVRQTRAPNPHDNKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYHGIGFNAWVNQQRMASARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQVYRQQVSENAAMETV

>HMPREF9540_03888
MQKAIHKTRDKNHARRLTAMLMLHRGERVSDVARTLCCARSSVGRWINWFTHSGIEGLKSLPAGRSRRWPFEHICTLLRELIKHSPGDFGYQRSRWSTELLAIKINEITGCQLHAGTVRRWLPSAGLVWRRAAPTLRIRDPHKDEKMAVIHKALDECSAEHPVFYEDEVDIHLNPKIGADWQLRGQQKRVVTPGQNEKYYLAGALHSGTGKVSYVGGNSKSSALFIALLKHLKATYRRAKTITLIVDNYIIHKSRETQRWLKANPKFRVIYQPVYSPWVNHVEQLWQALHDTITRNHQCRSMWQLLKKVRHFMETASPFPGGKHGQAKV

>HMPREF9540_03889
MISAATLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPFCQMMRQHPQLSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLRNDDVDLVDILNVDDC

>HMPREF9540_03890
MADKEKFRKKGVTMNDSLKAQCVAEFLGTGLFLFFGIGCLCALKVAGASLGLWEICIIWGLGISLAVYLTAGISGAHLNPAVTIALWLFASFPARKVLPFCLAQLAGAFGGAVLAYSLYSSLFTDFESAHNMVRGSAESLQLVSIFSTYPAAAINVWQAALVEVVITSMLMGVIMALTDDGNGVPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKIFTWLAGWGEIAMTGGRNIPYFIVPIIAPIIGACVGAAIYRYLIAKNLPVNSVTPKGISE

>HMPREF9540_03891
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAAHNVGEVKAVHVIPRPHTDVEKILPKGINP

>HMPREF9540_03892
MSSNELVEQIMAQVIARVATPEHEVLPKTTHQIRETAMAEKSCTLTEFVGTAIGDTVGLVIANVDSALLDAMKLEKRYRSIGILGARIGAGPHIMAADEAVKATNTEVISIELPRDTKGGAGHGSLILLGGNDVSDVKRGIEVAQKELDRTFGDVYANEAGHLELQYTARASYALEKAFGAPLGRACGVIVGAPAAVGVLMADTALKSANVDVVAYSSPAQGTSYSNEVILIISGDSGAVRQAVISAREIGKTVLSTLGDTPKNDRPSYI

>HMPREF9540_03893
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGVVTELDGKPASQFDLIDHFIARYGINLARAEEVIAMDSVKLANMLCDPNVKRSDIVPLTTAMTPAKIVEVVSQMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECASSNDQTFTHSDMRRTARFLMQFLPGTDFISSGFSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNSLEVVKALAQGGFTDVAQDMLNMQKAKLTGDYLHTSAIIVDDGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNEID

>HMPREF9540_03894
MEINEKLLRQIIEDVLAEMQPSDKSVSFRAPVSATVSSAPDTGNFLTEIGEAQQGTQQDEVIIAVGPAFGLAQTVNIIGIPHKNILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGDRLSGSGIAIGIQSKGTTVIHQQGLPPLSNLELFPQAPLLTLDTYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKKPQELRVTF

>HMPREF9540_03895
MNTDAIESMVRDVLNRMNSLQDAAPVSAVPNASILSAKVTDYPLANKHPEWVKTATNKTLDDFTLENVLSDNVTALDMRITPETLRIQAAIARDAGRDRLAMNFERAAELTSVPDDRILEIYNALRPYRSTKQELIAIADDLEQRYQAKICAAFVREAAELYVERKKLKGDD

>HMPREF9540_03896
MRYIAGIDIGNSSTEVALATLSATGELSFVSSALAETTGIKGTLRNVHGIQEALAQATKKVGINVSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGVGLGVGLTITPQELLTRPADTPYILVVSSAFDFADIATMINASVRAGYQLTGVILQRDDGVLVNNRLEIPLPIVDEVLYIDRIPLGMLAAIEVAVPGKVIETLSNPYGIATVFALNAEETKNIVPVARALIGNRSAVVVKTPSGDVKARSIPAGNIELLSAGRTTRVDVAAGADAIMKAVGECPKLENVTGEPGTNIGGMLEHVRQTMAELTNKPSNEIFIQDLLAIDTSVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMAMIASEIKQKLHVDVQVGGAEAEAAIQGALTTPGTTRPLAILDLGAGSTDASIINQSGEIVATHLAGAGDMVTMIIARELGLNDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFPTPLSPHVFARVCVVKPDELVPIPGDLTLEKVRAVRRSAKERVFVTNALRALRQVSPGGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLLISWHRELAHGK

>HMPREF9540_03897
MESKEHTPAIVVTEIGDCISTWNEVLLGIEEEGIPFRIQHIPSGEVIDSAWQAARQSPLLVGIACDREKLIVHYKNLPASAPLFTLMYQQDNHTRRSIGNNAARLVKGIPFRECHS

>HMPREF9540_03898
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASAVGEVKSCHVIPRPHSDVEAILPKSA

>HMPREF9540_03899
MKQSLGLLEVSGLALAISCADAMAKAASITLVGLEKTNGSGWTLIKITGDVASVNAAIATGASFAGQRNGLVAHKVIARPGDGILPHTTEALTVTVETSKTPATTVTSEIISCNLCLDPACQRQKGEPRSLCLYANKRGE

>HMPREF9540_03900
MDKQTLQETVNQILDEMRERPIPLGVSSRHIHLSTADYLRLFPEQPISEKKPLMQPGQYSAEQVVTLEGPKGKLHNVRLLGPLRNASQVEISRTDARTLGITAPLRMSGDLSGTPGIRLISPFAELEITSGVIVAQRHIHMSPLDALIYGVTHGDKVAVAIEGDERRLIFENVAVRVSPDMRLEMHIDTDEANAAGADSPDVFATLVSVP

>HMPREF9540_03901
MNNMLMQRIVDEVLFRLKQRAGKTLVLTVFQLRDASVQESVHQYASLQIRYVDLPLLRQLAENETSDRAAIQIHEALAWGMHIQLSLQHHFLNAIELKTLARLPLSWCDEQGQPIYLHRDRLLSYADIAQLSSGILVLQRKCCVTALAREAAITRNIQLIRQE

>HMPREF9540_03902
MHLARVTGAVVSTQKSPSLIGKKLLLVRRISADGELPLTPLTGDEVAVDSVGAGVGELVLLSSGSSARHVFSGPNEAIDLAVVGIVDTLSR

>HMPREF9540_03903
MAIYTRTGDSGSTSLFTGQRVSKTHLRVETYGTLDELNATLSLCYCATAIESHRILLEAIQQQIFWFSAELASESEQPSAQQRYIGTEEIAALENAIDSAMNAVPPVHSFILPGRCEAASRMHFARTVARRAERRLVELTTETTVRNVLLHYINRLSDCLYALARVEDNVAHQNLMIQEITKRYHEANHIPALKERTMPLTFQDLHQLIRSAAMRADELHIPVVISIVDANGTESVTWRMPDALLVSSELAPKKAWTAVAMKTATHKLADTVQPGAPLYGLESHMQGKVVTFGGGFPLWRDGKLLGGLGISGGSVEQDMDIAQSAMAVINVGVNQ

>HMPREF9540_03904
MNNSELETLIRNILREQLVPATPRTLRNAIFQTVDEAVCAAHQAFLRFQQCPLKTRSAIISAIREELMPRLTELAEESAKETGMGNKEDKYLKNKAALDNTPGVEDLTTTALTGDGGMVLFEYSPFGVIGSVTPSTNPTETIINNSISMLAAGNSVYFSPHPGAKYVSLKLITTIEDIAFRCSGIHNLIVTVSEPTFAATEQMMAHPKISVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADIVKAAEDIINGASFDYNLPCIAEKNLIVVASVAEYLIQQMQSFGALLLNYEQTEKLRAICLPDGSANKKLVGKSPSALLEAAGLPLPAKAPRLLIAVVDANDSWVTCEQLMPMLPIVKVNDFDSALTLALKVEDGLHHTAIMHSQNVSRLNLAARVMQTSIFVKNGPSWAGIGVGGEGFTTFTIATPTGEGTTSARTFARSRRCVLTSGFSIR

>HMPREF9540_03905
MNTFSLQTRLYSGPGSLKVISRFSHKHIWIICDVFLARSPLINTLHQALPDSNRLSIFSEITPDPTIQTVVKGIAQMQTLRPDVVIGFGGGSALDAAKAIVWFGRQCGIEIETCVAIPTTSGTGSEVTSACVISDPEKGIKYPLFDNALYPDIAILDPSLIVSVPPAITANTGMDVLTHALEAYVSPRASDFTDALVEKAVQIVFQYLPTAVKKGDCLATRGKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTAVIRFNAGDPRTAKRYARLAKTCHLCPDNANDTASLNALIQHIEQLKTTCTQPTLANALKEKKAEWSIRIPDMVQAALADATLRTNPRAADASAIAELLEELL

>HMPREF9540_03906
MNVGLTSCDDQTIRERVQAAGVVGAGGAGFPTHIKLQARVDTFLVNAAECEPMLKVDQQLMAQQASRLFRGVHYAMKATGTSSGIIALKEKYQLAINALTPLLPPDIRLHILPDVYPAGDEVLIIWMATGRRVPPAALPVSVGVVVNNVQTVLNIARAVEQQYPVTRRTLTVNGAVAKPITVTVPIGMSLREVLALAGGATVDAPGFINGGPMMGSLITSLDTPVSKTTGGLLVLPNSHSLIQRRLQNDRSVLAVAKTVCEQCRLCTDLCPRHLIGHELAPHLLVRAVNYQQLATPQLLLTALTCSECNVCASVACPVGISPMRINRLLKQELRAQNLRYEGALNPADPMANYRLIPVKRLVTRLGLTPWYQDAPLSEQVPQPEKVTLLLRQHIGASAIACVQKGDRVVHGQCVGQIPHGTLGAPIHASIDGMVSDVTENAITLVRG

>HMPREF9540_03907
MSKAVGILELSSIAKGMETGDAMLKSANVELLVSKTLCPGKFLLMLGGDVGAVQQAINSGASLAGEMLVDSLVLPNIHPSLLTAISGLNHVEQHRAVGVVETWSVAACIDAADCAVKAANVILVRVHMAFGIGGKCYMVVAGDISDVNNAVSVASERAGEKGLLVYRSVIARPHEAMWRQMVEG

>HMPREF9540_03908
MTTQHTTERMIQEYVPGKQVTLAHVIANPGKDLFKKLGLPDTISAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAIEYALSQVTRTLGEMMRFTACPITRT

>HMPREF9540_03909
MVSACEADIIALVLNADAPWSPFSPGFTSSMNRPVIGVVTKADLANMEQISLVKCWLREAGAHNVLVTSAVNNHGVAELLALLHTEEGCR

>HMPREF9540_03910
MLALTNSGCLNESDSHIIRGIKMETTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLLLDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGEMKNGEAK

>HMPREF9540_03911
MHGTRVALAFLLTFLIIRLFTIPESTWPLVTMVVIMGPISFWGNVVPRAFERIGGTVLGSILGLIALQLELISLPLMLVWCAAAMFLCGWLALGKKPYQGLLIGVTLAIVVGSPTGEIDTALWRSGDVILGSLLAMLFTGIWPQRAFIHWRIQLAKSLTEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQTINRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPVFANTEKLNDAVEELRQLLNNHHDLKVVETPIYGYVWLNMETAHQLELLSNLICRALRK

>HMPREF9540_03912
MNYEIKQEEKRTVAGFHLVGPWEQTVKKGFEQLMMWVDNKNIVPKEWVAVYYDNPDETPAEKLRCDTVVTVPNNFTLPENSEGVILTEISGGQYAVAVARVVGDDFAKPWYQFFNSLLQDSAYEMLPKPCFEVYLNNGAEDGYWDIEMYVAVQPKHH

>HMPREF9540_03913
MARPQTVNQLPDPIKKKLNKKLTESSFSGYVQLTEWLNSLGYPVSKSSVHRYAERRRLSLIAGSDAPCAIANIVDTKLRCLEIASLCLKTDEKLPADEVTKYAENLLEWLYDQK

>HMPREF9540_03914
MAKRADALTKADSAVRLQSAKKQDGSFKTLNIERYVIPTKAQALALLKGINPAFKPDNVDRFKESLSAEQKWQALAVLD

>HMPREF9540_03915
MGINKSNRSGIASQVDVLREKILDAVLLLPTPTETLVHRGKEMLALKEATKTNEEFAKALSVGGIKKREAYNAMRVALVFGVTNTPRAAIAKTGIGKTKLILLARLDEVTLDLLASGGAYNDHTLDDILRMSARELQRVIQSGEDIICERTLTNKEDIPSLSVEDESDKETEIKQSGKNEENKKQYCRELLKVALRYSDESELTAITKFIEHMIACALAGKYSPGLNAASYEVYNKFAISRRAAK

>HMPREF9540_03916
MKATANFRACPHESQGTSYDILFVNVDAPSTEIWEAAFSRLEAVRRLNDELAAAVDDKSTQTPLAVVNSILLSDAMAMVSLIGDRLNQNDK

>HMPREF9540_03917
MTNKRKMRQSAEVLSDMATHISCRLTMYGVDKGQSESIAVDIMAYLSDVYGGLNLYFPKGTKDQNDEKYDLVFADFNDGIPIAEIAKKYGYSLQWIYNIIAQKRREYRNSLKDCAA

>HMPREF9540_03918
MTNLNVGNWKTIEIFRAGTHTAMAGQEISFSDEDIDNMAAAYNGYHRAGYGAPLCLGHPASNSPAYGETNGLISKNGRLFALVKPDDTLLGLVRSGRYKKVSASFYKPGEASNPTGTGAWYLRHIGFLGSQPPAVKGLEQVAFMESCYPVCFGHNESHVYFSEFDAIADSQRATQHLLIKGVSEACNVSYSEALTLTTPFIWSY

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021