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BMC type: PDU1AB


Organism: Salmonella enterica (Salmonella choleraesuis). Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

   EE393_14165 (fasta)
        EE393_14170 (fasta) HMM00288_1_pdu PDU1AB (details)
               EE393_14175 (fasta) HMMacetkin_1 PDU1AB (details)
                 EE393_14180 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                   EE393_14185 (fasta) Hp_euts_babyPurple PDU1AB (details)
                      EE393_14190 (fasta) Ts_dodgerBlue PDU1AB (details)
                              EE393_14195 (fasta) HMMPduS_1_all PDU1AB (details)
                                    EE393_14200 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                            EE393_14205 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                  EE393_14210 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                   EE393_14215 (fasta) P_babyPink PDU1AB (details)
                                                      EE393_14220 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                         EE393_14225 (fasta) HMMptac_2_mix PDU1AB (details)
                                                           EE393_14230 (fasta) H_driedBlood PDU1AB (details)
                                                            EE393_14235 (fasta) H_tan PDU1AB (details)
                                                              EE393_14240 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                                                         EE393_14245 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                                            EE393_14250 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                                                                                EE393_14255 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                                                                                          EE393_14260 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                                                                               EE393_14265 (fasta) Tsp_greenishBeige PDU1AB (details)
                                                                                                EE393_14270 (fasta) H_robinEggBlue GRM4 (details)
                                                                                                     EE393_14275 (fasta)
                                                                                                          EE393_14280 (fasta) HMM10114PocR_1_pdu1 PDU1AB (details)
                                                                                                                  EE393_14285 (fasta)
                                                                                                                       EE393_14290 (fasta)
                                                                                                                          EE393_14295 (fasta)
                                                                                                                                 EE393_14300 (fasta)
                                                                                                                                    EE393_14305 (fasta)
                                                                                                                                       EE393_14310 (fasta)
                                                                                                                                           EE393_14315 (fasta)
                                                                                                                                                 EE393_14320 (fasta)
                                                                                                                                                     EE393_14325 (fasta)
                                                                                                                                                         EE393_14330 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_robinEggBlue
       H_driedBlood
       H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

       Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>EE393_14165
METTKPSFQDVLEFVRLFRRKNKLQREIQDIEKKIRDNQKRVLLLDNLSDYIKPGMSVEAIQGIIASMKSDYEDRVDDYIIKNAEISKERRDISKKLKAMGEMKHADVKAE

>EE393_14170
MRAPYSYLKGDNVAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVAVTAAPPLVNERPLSRAMVERVLAHWQYPAHWSHEIRVDVRSSIPIAKGMASSTADIAATAVATAHHLGHSLDEATLARLCVSIEPTDSTVFHQLTLFDHNNAATQIACEPPPPLDLLMLESPVTLRTQDYHRLPRQQKLLASSATLQQAWSLVQEACITQNPLRLGEAATLSAIASQTLLPKPGFTALLSLVEECDLYGLNVAHSGSVVGLMLDRKRHDIARLKSKLAEKKLTRHWPKQHLLKMVAGGVKLQ

>EE393_14175
MTHNIMAINAGSSSLKFQLLAMPQGDMRCQGLIERIGMADAQVTIKTLSQKWQETVPVADHRDAVTLLLEKLLGYQIINSLRDIDGVGHRVAHGGEFFKDSTLVTDETLAQIERLAELAPLHNPVNALGIHVFRQLLPDAPSVAVFDTAFHQTLDEPAYIYPLPWRYYAELGIRRYGFHGTSHKYVSGVLAEKLGVPLSALRVICCHLGNGSSVCAIKNGRSVNTSMGFTPQSGVMMGTRSGDIDPSILPWIALRESKTSQQLNQLLNNESGLLGVSGVSSDYRDVEQAANTGNRQAKLALTLFAERIRATIGSYIMQMGGLDALVFTGGIGENSARARSAVCHNLQFLGLAVDEEKNQCNATFIQTENALVKVAVINTNEELMIAQDVMRIALPATEGLCVSA

>EE393_14180
MKRIMLIGPSQCGKTSLTQCWRGETLHYQKTQTIIWSPAAIDTPGEYLENRCLYSALLTSACDAEVIALVLNADAAWSPFSPGFTAPMNRPTIGIVTKSDLASPPQISCVRTWLEQAGAQQVFITSSVTKSGFDEMAAFLNAKESL

>EE393_14185
MEIHTTTERMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDAVAAIGILTITPSEASIIACDIATKSGTVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLSEMMRFTSCPVTRT

>EE393_14190
MSQAIGILELTSIAKGMEAGDAMLKSANVSLLVSKTICPGKFLLMLGGDVGAVQQAIAAGVSLAGEMLVDSLVLANIHASVLPAISGLNAVEQRQAIGIVETWSVAACISAADRAVKSSSVTLVRVHMAFGIGGKCYMVVAGDISDVNNAVTVASESAGEKGLLVYRSVIPRPHEAMWRQMVEG

>EE393_14195
MNTASTVNLADYDAQTIRDRVRAAGVTGAGGAGFPTHVKLQAQVDTFLVNAAECEPMLKVDQQLMALQASRLIRGVQYAMRATGAREGIIALKEKYQTAIKALTPLLTPAIRLHMLPDVYPAGDEVLTIWLATGRRVPPAALPVSVGVVVNNVQTVLNIARAVEQQYPVTRRTLTVNGAVARPLTLTVPLGMPLRDVLALAGGATVDNPGFINGGPMMGNLLPSLDAPVTRTTGGLLVLPKTHPLIARRMQDDRTILAIARTVCEQCRLCTELCPRHLIGHELSPHLLVRAVNYHQAATPQLLLSALTCSECNVCESVACPVGISPVRINRMLKRELRAQHQRYEGPLHPADEMAKYRLIPIKRLIAKLGLNDWYHDAPFNPFEPQPDRVILLLRQHIGASAIPCVQKGDRVVRGQCIADIPQDALGAPIHASIDGIVHEITDEAITVVRG

>EE393_14200
MNTFSLQTRLYSGQGSLKALKRFTNKHIWIICDAFLARSPLLDTLRNALPANNRLSIFSDITPDPTIGTVVQGITQMQSLNPDVVIGFGGGSALDAAKAIVWFSREFGIEIETCVAIPTTSGTGSEVTCACVISDPDKGIKYPLFNNSLYPDMAILDPMLVVSVPATITANTGMDVLTHALEAYVSLRANDFTDALAEKATQIVFQYLPVAVNKGDCLATRGKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTSVIRFNAHDSRAAKRYARLAKACRLCPESANETTCLNALTQRVEQLKKQCAIPTLAEALKDKKQAYTPRIPAMAEAALADITLQTNPRTADAIAISELLEALL

>EE393_14205
MNTSELDMLIRNILSEQLTPEKTQTKGNGIFQTVDEAIRAAHQAFLRYQQCPLKTRSAIIHAIRAELAPHLASLAEESAAETGMGNKEDKLLKNKAALDNTPGIEDLTTTALTGDGGMVLFEYSPFGVIGSVAPSTNPTETIINNSISMLAAGNSVYFSPHPGAKSVSLKLIGMIEEIAFRCCGIRNLLVTVAEPTFEATQQMMSHPDIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIINGAAFDYNLPCIAEKSLIVVESVAERLIQQMQAFGALLLSPSDTDKLRTVCLQDGHANKKLVGKSPATLLEASGIATPAKTPRLLIAVVNAEDPWVTCEQLMPMLPIVKVSDFDSALALALKVEAGLHHTAIMHSENVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARSRRCVLTNGFSIR

>EE393_14210
MTIYTRTGDAGTTVLFSGQRVSKTHPRVEAYGTLDELNAALSLCVCATHHPQHRRFLESVQQQIFWFSAELASESEQPNPGQRYISTEEIAVLEATIDAAMSRVAVVHSFILPGRCEAASRLHFARTLTRRAERRLVELSADIAVRQVLMRYINRLSDCLYALARAEDHDAHQRHIINEVTRRYLASTYPSTIKESSMSLSFQELHQLIRSAVARAEELHVPVVISIVDGNGTPTVTWRMPDALLVSSELAPKKAWTAVAMKSATHELASAVQPGAALYGLDTHMQGKIVTFGGGFALWRNGALIGGLGISGGSVEQDMDIAQAAIAAIDVRTYQ

>EE393_14215
MHLARVTGAVVSTQKSPSLVGKKLLLVRRVSADGHLPQQPANGDEVAVDSVGAGVGELVLLSSGSSARHVFSGPNEAIDLAVVGIVDTLSR

>EE393_14220
MNEDKVQRIAEEVVFRLQRRAQSNIALSTAQLRDADSRTLFSRYGNLRILLADLPLLRGIAEQNDNDIAAIKLHYALALGVNVQISLCRSLLTSLPVKKLARLPLSFCDENGQSIILHSGQLLSYADVARLRRQILVLRRRCIVTALAHEAASVRNIQLIRQE

>EE393_14225
MDKTLLESTVHKVLDKLRNRPIPLGVSNRHIHLCAADYARLFPEQAIREKKALLQPGQYAAEQTVTLAGPKGQLKKVRLLGPLRSISQVEISRTDARTLGITAPLRMSGDLQGTPGIRLISPFAELELASGVIVAQRHIHMSPLDALIFRVAHGDTVSVAIEGSERRLIFDNVAIRVSPDMRLEMHIDTDEANAAGADDPHTFASLVARR

>EE393_14230
MKQSLGLLEVSGLALAISCADVMAKAASITLVGLEKTHGSGWTVIKITGDVASVQAAIITGASFADQRHGLIAHKVIARPGDGILAVIPESAPAIAQATPIKEPQLPEVQQDLSPLISCNLCLDPACKRQKGEPRTQCLHSGKRGDA

>EE393_14235
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSVAASAVGEVKSCHVIPRPHSDVEAILPKSA

>EE393_14240
MESNHNLPAIVITTLGCHISDWQHVLLGIEEEGIPWVVQEQEAGEVIYQAWLAASRSPLLVGIACDREKLIVHYKNLPPSAPLFTLTYHQNNRAQRCTGNNAARLVKGIPFRECDSSSTGEKQYE

>EE393_14245
MQYIAGIDIGNSSTEVALAALSDSGELIIKSSSLAETTGIKGTLRNVFGIQEALALAAKNAGINISDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGVGLGVGVTITPQELLTCPADKPYILVVSSAFDFADVATMINAAARAGYQLTGVILQQDDGVLVSNRLEKPLPIVDEVRYIDRIPLGMLAAIEVAVPGKVIETLSNPYGIATVFNLNSEETKNIVPMARALIGNRSAVVVKTPSGDVKARAIPAGNIELLSQGRTQRVDIAAGADAIMKAVSNCPRLDNVTGEAGTNIGGMLEHVRQTMAELTNKPSAEIFIQDLLAVDTSVPVNVTGGLAGEFSLEQAVGIASMVKSDRLQMAMIAREIEQKLSINVQVGGAEAEAAILGALTTPGTARPLAILDLGAGSTDASIINPKGEIIATHLAGAGDMVTMIIARELGLNDRYLAEEIKKYPLAKVESLFHLHHEDGSVQFFPAPLPPEVFARVCVVKPGELVPLPGDIALEKVRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSALDFEVPQLVTDALAHYRLVAGRGNIRGTEGPRNAVATGLILSWHKAFAHGK

>EE393_14250
MNTEAIESMVRDVLSRMNSLQGQTSASAAAGTSTHTAKVSDYPLANKHPEWVKTATNKTLDDFTLENVLSDNVTAQDMRITPETLRIQAAIAKDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTKEELMAIADDLESRYQAKICATFVREAATLYVERKKLKGDD

>EE393_14255
MEINEKLLRQIIEDVLSEMQTSDTPVSFHAPSATAAAQTTAPGGECFLTEIGEAKQGTQQDEVVIAVGPAFGLSQTVNIVGLPHKSILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQQGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL

>EE393_14260
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGAVTELDGKPVSDFDLIDHFIARYGINLARAEEVMAMDSVKLANMLCDPNVKRSDIVPLTTAMTPAKIVEVVSQMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAIPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQDIINKNRNGLEVVKALAKGGFPDVAQDMLNIQKAKLTGDYLHTSAIIVGSGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNELG

>EE393_14265
MSSNELVEQIMAQVIARVATPEKTVSSDTPHPKRETAMAEKSCSLTEFVGTAIGDTIGLVIANVDSALLEAMKLEKRYHSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYANEAGHIELQYTARASYALEKAFGAPVGRACGVIVGAPASVGVLMADTALKSANVDVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVISAREIGKTVLATLGDEPKNDRPSYI

>EE393_14270
MQQEALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGDVKAVHVIPRPHTDVEKILPKGINP

>EE393_14275
MNDSLKAQCGAEFLGTGLFLFFGIGCLSALKVAGASLGLWEICIIWGLGISLAVYLTAGISGGHLNPAVTIALWLFACFPRQKVLPYIIAQVAGAFGGALLAYALYSSLFIEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGVPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFTWLAGWGNMAMSGGREIPYFIVPIVAPVIGACAGAAIYRYFIGKNLPCNRCKPEENANQIHSNDVS

>EE393_14280
MISASALNSELINKIAQDFAQATGLAVVVVNIHGDEISELFNFTPFCQLMRQHPQHSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDVELVDILNVDDRWQADPELLNEFRNVPEMDYSRVIASADLLKLIVENCLKKQLNFVVIKDNPQKSETNKTARGPSPHDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAWVNRQRMVSARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQVYRQQINESSHPPSI

>EE393_14285
MAARHHAFILAGTGSGCGKTTVTLGLLRLLQKRALRVQPFKVGPDYLDTGWHTAICGVVSRNLDSFMLPPPVLNALFCEQMQRADVAVIEGVMGLYDGYGVDPNYCSTAAMAKQLDCPVILLVDGKAVSTSLAATVMGFQHFDPTLNLAGVIVNRVTSDAHYQLLKNAIEHYCSLPVLGYVPPCDGVALPERHLGLITARESLVNQQSWHDFVATLEQTVDVDALLSLSLLSALPAGTWPERPGKTAGAGLTLALADDEAFNFYYPDNIDLLERAGVNIVRFSPLHDRILPDCQMIWLGGGYPELYAADLAANTMMLKHLRAAHQRGAAIYAECGGLMYLGSTLEDSGGEIHQMADIIPGHSKMGKRLTRFGYCEARAMQPTLLAAPGEIVRGHEFHYSDFIPETPAVMACRKVRDDRVLQEWTGGWQTGNTFASYLHVHFAQRPEMLQHWLAAARRVS

>EE393_14290
MTILAWCIAWVLDFIIGDPQHWPHPVRWIGRLITFVQRIVRRYCHSDKALRIGGGVMWIVVVGATWGMAWGVLALAQRIHPWFGWSVEVWMIFTTLAGRSLARAAQEVERPLREDDLAESRIKLSWIVGRDTSQLQPEQINRAVVETVAENTVDGIIAPLFFLFLGGVPLAMAYKAVNTLDSMVGYKHEKYRAIGMVSARMDDVANYLPARLSWLLLGIAAGLCRLSGWHALRIGWRDRYNHSSPNCAWSEACVAGALGIQLGGPNSYFGERVDKPWIGDAQRDISVDDISRTIRLMWVASTLALALFIAARCWLSGVA

>EE393_14295
MHYIQQPQTIEANSFTIISDIIREAHPDYRFASRLHEAIIKRVIHTTADFDWLDILWFSADALEQLCDALRHPCIIYTDTTMALSGINKRLLATFGGECRCYISDPRVIRAAKTQGITRSMAAVDIAIDEEEKNKIFVFGNAPTALFRLLEHNVTVSGVVGVPVGFVGAAESKEALTHSHFPAIAALGRKGGSNVAAAIVNAMLYHLREA

>EE393_14300
MSELSFDAPVWHHGKALRKGYTTGSCATAAAKVAALMILRQHLIHQVSIVTPSGVTLCLNVESPHIEGQQAIAAIRKDGGDDVDATHGMLIFARVTLNDSGEITLTGGEGIGTVTRKGVGLPLGSAAINRTPRHTIESAVREAIGPARGADVEIFAPEGEARAQKTYNSRLGILGGISIIGTTGIVTPMSEESWKRSLSLELEIKRASGLTRVILVPGNHGERFVREQMGVDTQAVVTMSNFVGYMIEEAVRLGFRQIVLVGHPGKLIKIAAGIFHTHSHIADARMETLVAHLALLGAPLELLTLVGDCDTTEAAMEHIEAYGFGHIYNHLARRICLRVIQMLRFTKTLPVCDAILFSFDNHILGSNRPVDEIAKELQC

>EE393_14305
MLTVVGMGPAGRHLMTPAALEAIDHADALAGGKRHLAQFPTFGGERFTLGADIGALLSWIAARRDKRIVVLASGDPLFYGIGTRMVAHFGIEHVRIIPGISAVQYLCAQAGVDMNDMWLTSSHGRCVSFEQLASHRKVAMVTDARCGPREIARELVARGKGHRLMVIGENLAMENERIHWLPVSAVNADYEMSTVVILDER

>EE393_14310
MKDELFLRGENVPMTKEAVRALALSKLELHRASHLLDVGAGTGSVSIEAALQFPSLQVTAIERNPAALRLLDENRQRFACGNIDILPGEAPMTITRKADAVFMGGSGGHLTALIDWAMRHLHPGGRLVMTFILQENLHGALAHLARIGACRMDCVQLQLSSLTPLGVGHYFKPNNPVFVIACQKEENHV

>EE393_14315
MSETFDPRCVWFVGAGPGDRELITLKGYRLLQQAQVVIYAGSLINTELLDYCPAQAERYDSAELHLEQIIELMAAGVKAGKTVVRLQTGDVSLYGSVREQGEALTRRGIDWQVVPGVSAFLGAAAELGVEYTVPEVSQSLIITRLEGRTPVPAREQLEAFASHQTSMAIYLSVQRIHRVAERLIVGGYPATTPVAVIYKATWPESQTVRGTLADISDKVRDAGIRKTALILVGNFLGKEYHYSRLYAADFSHEYRKA

>EE393_14320
MNTVKPESIALFCLTPGGVALAKRLAAMLPLTCFTSEKLREEGFIPFDGGFANTARQAFTTYTALIFIGATGIAVRVLAPLVNDKFSDPAVVVIDERGQHVISLLSGHAGGANALTRYLAGMLGADPVITTATDINEMSALDTLAFQLNARMTDLRTAVKTVNQMLVSHQRVGLWWDAELTEDIGQCDIRGFIPVDDLQRLPELDVLICVSLRNDLPELPVLHWKLVPQRVVAGIGCRRDTPFPLLATLLARQLEAQKLDPLALKAIGSVTLKKGEPGLIQLASCCRVPFKTFTAEALREFEHHFPGSGFVRKTVGVSSVSGPAAWLLSQGQLLGETLREQGVTITLGVAH

>EE393_14325
MLSVIGIGPGSQAMMTMEAIDALQAAEIVVGYKTYTHLVKAFTGDKQVIKTGMCKEIERCQAAIELAQAGHNVALISSGDAGIYGMAGLVLELVGKQKLDVEVRLIPGMTASIAAASLLGAPLMHDFCHISLSDLLTPWPVIEKRIVAAGEADFVICFYNPRSRGREGHLARAFELLAASKSAQTPVGVVKSAGRKKEEKWLTTLGDMDFEPVDMTSLVIVGNKTTYVQDGLMITPRGYTL

>EE393_14330
MKEGEVLVVGGTSDARALCRQLDAAKVAYTLSVATPAGKALAGDIKGQVRCGRLEYGQMVAWLKENRTRWVIDASHPYAEMVSHNLLRACETAGVLLSRYQRPDQLSNLTHPLLYTARSIADACEIARRFGPRVLLTTGSKDLAVWRAGLAEKTLLARVLPVAEVIQRCSELGFGVGEIFALCGPFSADFNAAFYHQCRADVVITKASGAEGGYQEKVRPCLDAGIPCIVIARPTPLVTGDELLESQAAFAQRLSRWLAAAKE

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021