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BMC type: PDU1AB


Organism: Salmonella enterica subsp. enterica serovar Napoli. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

   E0X66_17310 (fasta)
         E0X66_17315 (fasta) HMM00288_1_pdu PDU1AB (details)
                  E0X66_17320 (fasta) HMMacetkin_1 PDU1AB (details)
                     E0X66_17325 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                       E0X66_17330 (fasta) Hp_euts_babyPurple PDU1AB (details)
                           E0X66_17335 (fasta) Ts_dodgerBlue PDU1AB (details)
                                     E0X66_17340 (fasta) HMMPduS_1_all PDU1AB (details)
                                             E0X66_17345 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                       E0X66_17350 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                              E0X66_17355 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                E0X66_17360 (fasta) P_babyPink PDU1AB (details)
                                                                   E0X66_17365 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                                       E0X66_17370 (fasta) HMMptac_2_mix PDU1AB (details)
                                                                          E0X66_17375 (fasta) H_driedBlood PDU1AB (details)
                                                                            E0X66_17380 (fasta) H_tan PDU1AB (details)
                                                                              E0X66_17385 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                                                                            E0X66_17390 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                                                                E0X66_17395 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                                                                                                     E0X66_17400 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                                                                                                                  E0X66_17405 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                                                                                                        E0X66_17410 (fasta) Tsp_greenishBeige PDU1AB (details)
                                                                                                                          E0X66_17415 (fasta) H_robinEggBlue GRM4 (details)
                                                                                                                                E0X66_17420 (fasta)
                                                                                                                                       E0X66_17425 (fasta) HMM10114PocR_1_pdu1 PDU1AB (details)
                                                                                                                                                 E0X66_17430 (fasta)
                                                                                                                                                        E0X66_17435 (fasta)
                                                                                                                                                            E0X66_17440 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_robinEggBlue
       H_driedBlood
       H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

       Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>E0X66_17310
METTKPSFQDVLEFVRLFRRKNKLQREIQDIEKKIRDNQKRVLLLDNLSDYIKPGMSVEAIQGIIASMKSDYEDRVDDYIIKNAEISKERRDISKKLKAMGEMKHADVKAE

>E0X66_17315
MAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVAVTAAPPLVNERPLSRAMVERVLAHWQYPAHWSNEIRVDVRSSIPVAKGMASSTADIAATAVATAHHLGHSLDETTLAQLCVSIEPTDSTVFHQLTLFDHNNAATQIACEPPPPIDLLVLESPVTLRTQDYHRLPRQQKLIASSPTLQQAWNLVQEACITQNPLRLGEAATLSAIASQTLLPKPGFTALLSLVEECDLYGLNVAHSGSVVGLMLDRKRHDIARLKGKLAEKKLTRHWPKQHLLKMVTGGVKLQ

>E0X66_17320
MSYKIMAINAGSSSLKFQLLEMPQGDMLCQGLIERIGMADAQVTIKTHSQKWQETVPVADHRDAVTLLLEKLLGYQIINSLRDIDGVGHRVAHGGEFFKDSTLVTDETLAQIERLAELAPLHNPVNALGIHVFRQLLPDAPSVAVFDTAFHQTLDEPAYIYPLPWHYYAELGIRRYGFHGTSHKYVSGVLAEKLGVPLSALRVICCHLGNGSSVCAIKNGRSVNTSMGFTPQSGVMMGTRSGDIDPSILPWIAQRESKTPQQLNQLLNNESGLLGVSGVSSDYRDVEQAANTGNRQAKLALTLFAERIRATIGSYIMQMGGLDALVFTGGIGENSARARSAVCHNLQFLGLAVDEEKNQRNATFIQTENALVKVAVINTNEELMIAQDVMRIALPATEGLCVPA

>E0X66_17325
MKRLMFIGPSQCGKTSLTQSLRGEALHYKKTQAIEWSPMAIDTPGEYLENRCLYSALLTSACEADVIALVLNADAQWSPFSPGFTVPMNRPTIGLVTKADLADPQRISLVAQWLTQAGARQIFITSALNNSGLDAVLDFLNSKEPLCLTK

>E0X66_17330
MERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLGEMMQFTTCSITRT

>E0X66_17335
MSQAIGILELTSIAKGMELGDAMLKSANVDLLVSKTICPGKFLLMLGGDIGAVQQAIETGTSQAGEMLVDSLVLANIHPSVLPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEKGLLVYRSVIPRPHEAMWRQMVEG

>E0X66_17340
MSAAINSEMSLSADEIRERVRAAGVVGAGGAGFPAHVKLQAQVEIFLVNAAECEPMLKVDQQLMWQQAARLVRGVQYAMTATGAREGVIALKEKYRRAIDALTPLLPAGIRLHILPDVYPAGDEVLTIWMATGRRVAPAALPASVGVVVNNVQTVLNIARAVEQQFPVTRRTLTVNGAVARPLTVTVPVGMSLHEVLALAGGATVDDPGFINGGPMMGGLITSLDNPVTKTTGGLLVLPKSHPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNFHQAATPQLLLSALTCSECNVCESVACPVGISPMRINRMLKRELRAQNQRYEGPLNPADEMAKYRLVPVKRLIAKLGLSPWYQEAPLVEDEPAVETVTLQLRQHIGASAVANVAVGERVTRGQCVADVPPGTLGAPIHASIDGVVSAISEQAITVVRG

>E0X66_17345
MNTFSLQTRLYSGQGSLAVLKRFTNKHIWIICDGFLARSPLLDTLRNALPADNRISVFSEITPDPTIHTVVQGIAQMQALQPQVVIGFGGGSAMDAAKAIVWFSQQSGINIETCVAIPTTSGTGSEVTSACVISDPDKGIKYPLFNNALYPDMAILDPELVVSVPPQITANTGMDVLTHALEAWVSPHASDFTDALAEKAAKLVFQYLPTAVEKGDCVATRGKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTTVIRFNAGVPRAAKRYARLAKACGFCPAEANDVTAINALIQQIELLKQRCALPSLAVALKEGRSDFSARTPAMVQAALADVTLRTNPRPASAEEIRELLEELL

>E0X66_17350
MNTSELETLIRTILSEQLTTPAQTPVQPQGKGIFQSVSEAIDAAHQAFLRYQQCPLKTRSAIISAMRQELTPLLATLAEESANETGMGNKEDKFLKNKAALDNTPGVEDLTTTALTGDGGMVLFEYSPFGVIGSVAPSTNPTETIINNSISMLAAGNSIYFSPHPGAKKVSLKLISLIEEIVFRCCGIRNLVVTVAEPTFEATQQMMAHPRIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIINGASFDYNLPCIAEKSLIVVESVAERLVQQMQTFGALLLSPADTDKLRAVCLPEGQANKKLVGKSPSAMLEAAGIAVPAKAPRLLIAMVNADDPWVTSEQLMPMLPVVKVNDFDSALTLALKVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARSRRCVLTNGFSIR

>E0X66_17355
MAIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLCACAAADENHRTLLEAIQQQLFWFSAELASDSEQPSPKQRYISSEEISALEAAIDRAMARVEPLHSFILPGRCEAASRLHFARTLARRAERRLVELATEVNVRQVLMRYINRLSDCLYALARAEDSDAHQANIIREVSKRYLAASQPTRSKETTPVALSFHDLHQLTRAAVERAQQLQVPVVVSIVDAHGTETVTWRMPDALLVSSELAPKKAWTAVAMKTATHELSDVVQPGAALYGLESHLQGKVVTFGGGYALWRDGILIGGLGISGGSVEQDMDIAQTAIAAINVGTHQ

>E0X66_17360
MHLARVTGAVVSTQKSPSLIGKKLLLVRRVSADGELPASPTSGDEVAVDSVGAGVGELVLLSGGSSARHVFSGPNEAIDLAVVGIVDTLSR

>E0X66_17365
MNGKILQRIVEEIVSRLQRRAQSTVTLSVAQLRDADCPALFCQHASLRILLVDLPLLSQLADAETDDAAARKIHDALAFGIRVQLSLHSQLLPVIPVKKLARLPLVFTDERGLPLVLHAGSVLSYRDVALLSQGRLVIHRKCIVTAMARDAANARNIQLIKQE

>E0X66_17370
MDKELLQSTVRKVLDEMRQRPIPLGVSNRHIHLSAQDYEQLFPGHPISEKKALLQPGQYAAEQTVTLVGPKGQLKNVRLLGPLRSVSQVEISRTDARALGIAAPLRMSGNLKGTPGIRLVSPFAELELPSGVIVAQRHIHMSPLDALILKVSHGDRVSVAIEGDDRGLIFNNVAIRVSPDMRLEMHIDTDEANAAGADNPQAFARLVGPR

>E0X66_17375
MANKEHRVKQSLGLLEVCGLALVISCADIMAKSASITLLALEKTNGSGWMVIKIAGDVASVQAAITTGAQFAEQRNGLVAHKVIARPGEGILLAEAPSPSVIEPEPEASEIADVVSEAPAEEAPQESELVSCNLCLDPKCPRQKGEPRTLCIHSGKRGEA

>E0X66_17380
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSAAASVVGEVKSCHVIPRPHSDVEAILPKSA

>E0X66_17385
MDSNHSAPAIVITVINDCASLWHEVLLGIEEEGIPFLLQHHPAGDVVDSAWQAARSSPLLVGIACDRHTLVVHYKNLPASAPLFTLMHHQDSQAQRNTGNNAARLVKGIPFRDLNS

>E0X66_17390
MRYIAGIDIGNSSTEVALARQDETGALTITHSALAETTGIKGTLRNVFGIQEALTLVAKRAGINVSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGVGLGVGITITPEELLTRPADSSYILVVSSAFDFADIANVINASMRAGYQITGVILQRDDGVLVSNRLEKSLPIVDEVLYIDRIPLGMLAAIEVAVPGKVIETLSNPYGIATVFNLNADETKNIVPMARALIGNRSAVVVKTPYGDVKARAIPAGNLELQAQGRTVRVDVAAGAEAIMKAVDGCGKLDNVTGEAGTNIGGMLEHVRQTMAELTNKPSSEIFIQDLLAVDTSVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMAMIAREIEQKLNIDVQIGGAEAETAILGALTTPGTTRPLAILDLGAGSTDASIINPKGEIIATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFPTPLPPAVFARVCVVKPDELVPLPGDLALEKVRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLILSWHKEFAYGQ

>E0X66_17395
MNTDAIESMVRDVLSRMNSLQGDAPAAVPAAGGTSRSAKVSDYPLANKHPEWVKTATNKTLDDFALENVLSNKVTAQDMRITPETLRLQASIAKDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTKEELLAIADDLENRYQAKICAAFVREAAGLYVERKKLKGDD

>E0X66_17400
MEINEKLLRQIIEDVLRDMKDSDKPVSFNTPAASTAPQTAAPAGDGFLTEVGEARQGTQQDEVIIAVGPAFGLAQTVNIVGLPHKSILREVIAGIEEEGIRARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQQGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL

>E0X66_17405
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGAVTELDGKPVSEFDLIDHFIARYGINLNRAEEVMAMDSVKLANMLCDPNVKRSEIVPLTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAQGGFTDVAQDMLNIQKAKLTGDYLHTSAIIVGDGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNEID

>E0X66_17410
MSSNELVEQIMAQVIARVATPEQQAIPGQPQPIRETAMAEKSCSLTEFVGTAIGDTLGLVIANVDTALLDAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFGAPIGRACGVIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVTSAREIGKTVLATLGSEPKNDRPSYI

>E0X66_17415
MQQEALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKGISQ

>E0X66_17420
MNDSLKAQCGAEFLGTGLFLFFGIGCLSALKVAGASLGLWEICIIWGLGISLAVYLTAGISGGHLNPAVTIALWLFACFPKQKVLPYIIAQFAGAFGGALLAYVLYSSLFTEFETAHHMVRGSVESLQLASIFSTYPAAALNVWQAALVEVVITSILMGMIMALTDDGNGIPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFTWLAGWGNMAMSGGREIPYFIVPIVAPVIGACAGAAIYRYFIGKNLPCNRCKL

>E0X66_17425
MISASALNSELINKIAQDFAQATGLAVVVVNIHGDEISELFNFTPFCQLMRQHPQHSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDVELVNILNVDDRWQADPELLNEFRNVPEMDYSRVIASADLLKLIVENCLKKQLNFVVIKDNPQQSEANKTTRGPTPHDSKMKKALRYIDAHLSDDLRLEDVASHVYLSPYYFSKLFKKYQGIGFNAWVNRQRMVSARELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAYRQQINENSHPPLL

>E0X66_17430
MAARHHAFILAGTGSGCGKTTVTLGLLRLLQKRALRVQPFKVGPDYLDTGWHTAICGVASRNLDSFMLPPPILNALFCEQMRQADIAVIEGVMGLYDGYGVDPNYCSTAAMAKQLGCPVILLVDGKAVSTSLAAIVMGFQHFDPTLNLAGVIVNRVTSDAHYQLLKNAIEHYCSLPVLGYVPPCDGVALPERHLGVITARESLVNQQSWHDFAATLEQTVDVDALLSLSVLSALPAGMWPERPDNTAGAGLTLALADDEAFNFYYPDNIYLLERAGVNIVRFSPLHDRALPDCQMIWLGGGYPELYAADLAANTAMLKHLRAAHQRGVAIYAECGGLMYLGSTLEDSGGEIHQMANIIPGHSKMGKRLTRFGYCEAQAMQPTLLAVPGEIVRGHEFHYSDFIPETPAVMACRKVRDGRVLQEWTGGWQTGNTFASYLHVHFAQRPEMLQHWLAAARRVL

>E0X66_17435
MTILAWCIAWVLDFIIGDPQHWPHPVRWIGRLITFVQRIVRRYCPGDKALRIGGGVMWVVVVGATWGVAWGVLALAQRIHPWFGWSVEVWMIFTTLAGRSLARAAQEVERPLRENDLAESRIKLSWIVGRDTSQLQPAQINRAVVETVAENTVDGIIAPLFFLFLGGAPLAMAYKAVNTMDSMVGYKHEKYRAIGMVSARMDDVANYLPARLSWLLLGIAAGLCRLSGWRALRIGWRDRYNHSSPNCAWSEACVAGALGIQLGGPNNYFGERVDKPWIGDAQRDISVDDISRTIRLMWVASTLALFIAARCGLSGVA

>E0X66_17440
MHYIQQPQTIEANSFTIISDIIRETRPDYRFASPLHEAIIKRVIHTTADFDWLDILWFSADALEQLCDALRQPCIIYTDTTMALSGINKRLLATFGGECRCYISDPRVVRAAKTQGITRSMAAVDIAIAEDEKNKLFVFGNAPTALFRLLEHNVTVSGVVGVPVGFVGAAESKEALTHSHFPAVAALGRKGGSNVAAAIVNALLYHLRGA

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021