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BMC type: PDU1AB


Organism: Klebsiella pneumoniae. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

   DM062_28230 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                DM062_28235 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                    DM062_28240 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                      DM062_28245 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                       DM062_28250 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                        DM062_28255 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                           DM062_28260 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                               DM062_28265 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                   DM062_28270 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                       DM062_28275 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                         DM062_28280 (fasta) H_driedBlood PDU1AB (details)
                                           DM062_28285 (fasta) H_tan PDU1AB (details)
                                              DM062_28290 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                               DM062_28295 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                 DM062_28300 (fasta) H_driedBlood PDU1AB (details)
                                                   DM062_28305 (fasta) HMMptac_2_mix PDU1AB (details)
                                                     DM062_28310 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                         DM062_28315 (fasta) HMMptac_2_mix PDU1AB (details)
                                                           DM062_28320 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                                  DM062_28325 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                   DM062_28330 (fasta) P_babyPink PDU1AB (details)
                                                                      DM062_28335 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                                             DM062_28340 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                                                       DM062_28345 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                                                        DM062_28350 (fasta)
                                                                                                     DM062_28355 (fasta) HMMPduS_1_all PDU1AB (details)
                                                                                                         DM062_28360 (fasta) Ts_dodgerBlue PDU1AB (details)
                                                                                                          DM062_28365 (fasta) Ts_dodgerBlue PDU1AB (details)
                                                                                                             DM062_28370 (fasta) Hp_euts_babyPurple PDU1AB (details)
                                                                                                                 DM062_28375 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                                                                                                                    DM062_28380 (fasta) HMMacetkin_1 PDU1AB (details)
                                                                                                                         DM062_28385 (fasta) HMMacetkin_1 PDU1AB (details)
                                                                                                                              DM062_28390 (fasta) HMM00288_1_pdu PDU1AB (details)
                                                                                                                                   DM062_28395 (fasta) HMMreg00392_2_grm2 EUT2A (details)
                                                                                                                                    DM062_28400 (fasta) HMM00288_1_pdu PDU1AB (details)
                                                                                                                                         DM062_28405 (fasta) HMMreg00392_2_grm2 EUT2A (details)
                                                                                                                                                    DM062_28410 (fasta)
                                                                                                                                                      DM062_28415 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      2x H_driedBlood
       H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

      2x Ts_dodgerBlue

(complete list of loci)

Protein sequences:

>DM062_28230
MEINETLLRQIIEEVLSEMKSGADKPVSFSAPAASVASAAPVAVAPVSGDSFLTEIGEAKPGTQQDEVIIAVGPAF

>DM062_28235
MRARRTPSQQAHVTNIKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSALDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAKGGFPDVAQDMLNIQKAKLTGDYLHTSAIIVGEGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNELG

>DM062_28240
VIIAVGPAFGLAQTANIVGIPHKNILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQRGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILH

>DM062_28245
MNTDAIESMVRDVLSRMNSLQDGVTPAPAAPTNDTVRQPKVSDYPLATCHPEWVKTATNKTLDDLTLEN

>DM062_28250
DQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL

>DM062_28255
MRYIAGIDIGNSSTEVALATVDDAGVLNIRHSALAETTSIKGTLRNVFG

>DM062_28260
VLSDRVTAQDMRITPETLRMQAAIAQDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTQAELLAIADDLEHRYQARLCAAFVREAAGLYIERKKLKGDD

>DM062_28265
IRHSALAETTSIKGTLRNVFGIQEALTQAAKAAGIQLSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGVGLGVGITITPEALLSCSADTPYILVVSSAFDFADVAAMVNAATAAGYQITGIILQQDDGVLVNNRLQQPLPV

>DM062_28270
PYGIATVFDLNAEETKNIVPMARALIGNRSAVVVKTPSGDVKARAIPAGNLLLIAQGRSVQVDVAAGAEAIMKAVDGCGKLDNVAGEAGTNIGGMLEHVRQTMAELTNKPAQEIRIQDLLAVDTAVPVSVTGGLAGEFSLEQAVGIASMVKSD

>DM062_28275
VPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMALIAREIEHKLQIAVQVGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINAQGEISATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRH

>DM062_28280
MKQSLGLLEVSGLALAITCADAMAKAAAITLLALEKTNGSGWMVVKIAGDVASVQAAVMTGAELAERQQGLVAQK

>DM062_28285
MNNALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASVVGEVKSSHVIPRPHSDVEAILPKSV

>DM062_28290
MESSVVAPAIVIAVTDECSEQWRDVLLGIEEEGIPFVLQPQTGGDLVHHAWQAAQRSPLQVGIACDRERLIVHYKNLPASTPLFSLMYHQNRLARRNTGNNAARLVKGIPFRDRHA

>DM062_28295
LDFEIPQLVTDALAHYRLVAGRGNIRGCEGPRNAVASGLLLSWQKGGTHGE

>DM062_28300
VQAAVMTGAELAERQQGLVAQKVIARPGEGLLPARVQAPSPAPDVAVTEENTALTDAPSHSTERVTCNLCLDPHCPRQKGDPRSQCLHAGKRGDA

>DM062_28305
MDKQQLASTVNKVLDEMRQRPIPIGISSRHIHLAAADYARLFPAQPIQPKKALLQPGQYAAEQTVTLVGPKGRLN

>DM062_28310
MNHAMLQRIVEEVAARLRHRALSTATLSVAQLGEADIRNLLCQHASLRIVQVDLPLLEQLAGQRALAAAGCALHEAMAWGVRVQ

>DM062_28315
VGPKGRLNNVRLLGPLRQTSQVEISRTDARILGIAAPLRMSGNLQGTPGIRLISPFAELELSGGTIVAQRHIHMSPLDALILRVSHGDSVAVAIEGSDRRLIFDNVAVRVAPDMRLEMHIDTDEANAAGADAAQAWATLVTKP

>DM062_28320
ALHEAMAWGVRVQLTLLPALLPALAVKKLARLPLTFSDPLGQPVRLHAASVLTYADVARFSGGYLVLRRRPIITALAREAAVARHVQLIKQE

>DM062_28325
MAIYTRTGDAGSTSLFTGQRVSKTHPRVEAYGTLDELNAMLSLCVCAVAEEEQRTLLEALQQHIFWFSAELASDSEQPSPGKRYISSEEIALLEQTIDREMARVPALHQFVLPGRCEAASRLHLARTVARRAERRLVELAAEVTIRQILLRYLNRLSDCLYALARSEDHAAHQRRLVTEIATRYLAASRSPAPDAPKAQAGSLSFHELHQLIRQAIEHARQLQVPVV

>DM062_28330
MLPTSGDEVAVDSVGAGVGELVLLCSGSSARHVFSGPNEAIDLAIVGIVDSLSR

>DM062_28335
PFGVIGAVAPSTNPTETIINNSISMLAAGNSVYFSPHPGAKKVSLKLIARIEEIAYRCSGIRNLVVTVAEPTFEATQQMMSHPLIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDET

>DM062_28340
GIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIISGAAFDYNLPCIAEKSLIVVASVADRLIQQMQDFDALLLSRQEADTLRAVCLPDGAANKKLVGKSPAALLAAAGLAVPPRPPRLLIAEVEANDPWVTCEQLMPVLPIVRVADFDSALALALRVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARLRRCVLTNGFSIR

>DM062_28345
MHTFSLQTRLYSGPGSLAALQRFSHQHIWIVCDGFLARSPLLDRLRAALPASNRVSVFSDITPDPTIHTVAKGIAQMQALRPQVVIGFGGGSAMDAAKAIVWFSQQGGLPVDTCVAIPTTSGTGSEVTSACVISDPEKGIKYPLFHEALCPDMAIIDPTLVVSVPPTITAHTGLDALTHALEAWVSPQATDFTDALAEKAARLVFRALPVAIRQGDCIATRSKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTAVIRFNAGEPRAAKRYARLARACRFCPPAAGEQEAFQALLTAVETLKQQCAIPPLKGALQEKYPLFLSRIPAMVPAALADAT

>DM062_28350
LKGALQEKYPLFLSRIPAMVPAALADATLRTNPRPVDGAAIAQLLENLQ

>DM062_28355
MSEAIVPLSSIDAAEIRERVRAAGVVGAGGAGFPTHIKLQARVDTVLVNAAECEPMLKVDQQLMAQQADRLIRGLGYAMTATGAREGIIALKAKYAPAIAALTPRLPEWARLHILPDVYPAGDEVLTIWLATGRRIPPAALPVSVGVVVNNVQTVLNIARAVEQGYPVTRRTLTVNGAVARPLTLAVPLGISLREVLDLAGGATVDDPGFINGGPMMGSLITSLETPVTKTTGGLLVLPGNHPLIQRRRQDERTLLAIARTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNYRQAATPSLLLSALTCSECNVCESVACPVGISPMRINRLLKRELRAKNLRYDGPLRPADEMAKHRLVPVKRLISKLGLDPWYQEAPLTAVEPEVACVTLPLRQHIGISAVPCVAPGERVTRGQLLA

>DM062_28360
MTQAIGILELTSIARGMELGDVMLKSANVQLLLCRTLCPGKFLLMLGGDVGAVQQAIAAGTARAGEMLVDSLVLANIHPSVLPAISGLNVVGQRQAAGIVETWSVAACISAADHAVKAANVTLVRVHMAFGIGGKCYMVVA

>DM062_28365
TLVRVHMAFGIGGKCYMVVAGDIADVDNAVTVASDSAGEKGLLVHRAVIPRPHDALWQQLMEG

>DM062_28370
MEPQTPTERMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALRQVTRTLGELMRFTACPITRT

>DM062_28375
MKRLMLIGPSQCGKTSLTQVLRGETLRYQKTQAIVWTPAAIDTPGEYLENRCLYSALLTSACEADVIALVLNADAPWSPFSPGFTAPMNRPVIGVITKADLAAPPRLQQVRTWLEAAGAGHIFITSALTGDGLDDLFACLNAEEYQ

>DM062_28380
MTYKIMAINAGSSSLKFQLLNMPQGALLCQGLIERIGLPEARFTLKTSAQKWQETLPIADHHEAVTLLLEALTGRGILSSLQEIDGVGHRVAHGGERFKDAALVCDDTLREIERLAELAPLHNPVN

>DM062_28385
FRQLLPAVPAVAVFDTAFHQTLAPEAWLYPLPWRYYAELGIRRYGFHGTSHHYVSSALAEKLGVPLSALRVVSCHLGNGCSVCAIKGGQSVNTSMGFTPQSGVMMGTRSGDIDPSILPWLVEKEGKSAQQLSQLLNNESGLLGVSGVSSDYRDVEQAADAGNERAALALSLFAERIRATIGSYIMQM

>DM062_28390
TIPVAKGMASSTADIAATAVATAHHLGHLLDEPTLARLCVALEPTDSTLFRQLTLFDHNTAATQIACPLPPALDLLVLESPLTLRTTDYHQLPREPGLLANASRLQLAWEKVQQACHCGNPQLLGEAATISAIASQQLLPKPGFDALLDLVESAGLYGLNVAHSGSVVGLLLDRRR

>DM062_28395
LILDEAFLDFIPDQPGFIPLLAQHPHVWVLRSLTKFYAIPGLRLGYLLNADAQAVARLRARQMPWSINAYAALAGEIILQDRAYQRATWQWLQEEGARFYAQLQEMGGLTVWPGRANYLFLRCDRADFDLQYALLRQHVLIRSCANYPGLDSRYFRVAIRSAEENDQLLAALRRVLA

>DM062_28400
YGLNVAHSGSVVGLLLDRRRHDVEFLQWRLAESDIAAHWPQQHLLAMVPGGVILQ

>DM062_28405
PASLRQAIVDNPGCAERYPDVEYQQLHQALAAHHQLPAAHILAGNGETESIFTLVHGLKPRRAMIVIPGFAEYRRALQTVDCEVVEYALRERDGWQLTDAILDALTPALDCLFLCTPNNPTGLLPERGLLEAIAQRCRALNISLILDEAFLDFIPDQPGFIPLLAQH

>DM062_28410
PERVVVDLEGVNLNSVLKGMGGQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANATDVQDPLLALLEDYNKGDLERQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYRTREKDVVLQIARRLRALIDKEGNMKAYMTRNEDVFIPLKVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLEKMGNINNLHKNRVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTAKFQQEVAESILAGIKAYFADGATLARRGYCRHGRFSVRPCP

>DM062_28415
MSGNNSGLSRRRLLQGAGAMWLMSVSPVGLAAAARVVAVRVWPASTYTRVTVESNHVLKYRQFALSNPERVVVDLEGVNLNSVLKGMG

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021