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BMC type: PDU1AB


Organism: Klebsiella pneumoniae. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

                DM059_24705 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                  DM059_24710 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                      DM059_24715 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                          DM059_24720 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                              DM059_24725 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                   DM059_24730 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                       DM059_24735 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                          DM059_24740 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                            DM059_24745 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                             DM059_24750 (fasta) HMMpropdeh3_2_pdusml PDU1C (details)
                                              DM059_24755 (fasta) H_tan PDU1AB (details)
                                                  DM059_24760 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                       DM059_24765 (fasta) HMMptac_2_mix PDU1AB (details)
                                                           DM059_24770 (fasta) H_driedBlood PDU1AB (details)
                                                            DM059_24775 (fasta) H_tan PDU1AB (details)
                                                                DM059_24780 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                                         DM059_24785 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                          DM059_24790 (fasta) P_babyPink PDU1AB (details)
                                                                            DM059_24795 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                                              DM059_24800 (fasta) Ts_dodgerBlue PDU1AB (details)
                                                                                          DM059_24805 (fasta) HMMPduS_1_all PDU1AB (details)
                                                                                                    DM059_24810 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                                                                      DM059_24815 (fasta) HMMalddh_1_eutpdugrm GRM4 (details)
                                                                                                         DM059_24820 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                                                                                                            DM059_24825 (fasta) Hp_euts_babyPurple PDU1AB (details)
                                                                                                             DM059_24830 (fasta) Ts_dodgerBlue PDU1AB (details)
                                                                                                              DM059_24835 (fasta)
                                                                                                                DM059_24840 (fasta) HMMacetkin_1 PDU1AB (details)
                                                                                                                       DM059_24845 (fasta) HMMacetkin_1 PDU1AB (details)
                                                                                                                               DM059_24850 (fasta) HMM00288_1_pdu PDU1AB (details)
                                                                                                                                     DM059_24855 (fasta) HMMreg00392_2_grm2 EUT2A (details)
                                                                                                                                        DM059_24860 (fasta) HMMreg00392_2_grm2 EUT2A (details)
                                                                                                                                                   DM059_24865 (fasta)
                                                                                                                                                        DM059_24870 (fasta)
                                                                                                                                                         DM059_24875 (fasta)
                                                                                                                                                           DM059_24880 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_driedBlood
      2x H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

      2x Ts_dodgerBlue

(complete list of loci)

Protein sequences:

>DM059_24705
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIRIVNGAVTELDGKPVEQFDLIDHFIARYGINLARAEEVMAMDSVKLANMLCDPNVKRSDIVPLTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNIKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSALDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAKGGFPDVAQDMLNIQKAKLTGDYLHTSAIIVGEGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNELG

>DM059_24710
MEINETLLRQIIEEVLSEMKSGADKPVSFSAPAASVASAAPVAVAPVSGDSFLTEIGEAKPGTQQDEVIIAVGPAFGL

>DM059_24715
LTEIGEAKPGTQQDEVIIAVGPAFGLAQTANIVGIPHKNILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQRGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL

>DM059_24720
MNTDAIESMVRDVLSRMNSLQDGITPAPAAPTNDTVRQPKVSDYPLATRHPEWVKTATNKTLDDLTLENVLSDRVTAQDMRITPETLRMQAAIAQDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTQAELLAIADDLEHRYQARLCAAFVREAAGLYIERKKLKGDD

>DM059_24725
MRYIAGIDIGNSSTEVALATVDDAGVLNIRHSALAETTGIKGTLRNVFGIQEALTQAAKAAGIQLSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGVGLGVGITITPEALLSCSADTPYILVVSSAFDFADVAAMVN

>DM059_24730
PYILVVSSAFDFADVAAMVNAATAAGYQITGIILQQDDGVLVNNRLQQPLPVIDEVQHIDRIPLGMLAAVEVALPGKIIETLSNPYGIATVFDLNAEETKNIVPMARALIGNRSAVVVKTPSGDVKARAIPAGNLLLIAQGRSVQVDVAAGAEAIMKAVDGCGKLDNVAGEAGTNIGGMLEHVRQTMAELTNKPAQEIRIQDLLAVDTAVPVSVT

>DM059_24735
NKPAQEIRIQDLLAVDTAVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMALIAREIEHKLQIAVQVGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINAQGEISATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFPSALPPAVFA

>DM059_24740
VQFFPSALPPAVFARVCVVKPDELVPLPGDLPLEKVRAIRRSAKSRVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEIPQLVTDALAHYRLVAGRGNIRGCEGPRNAVASGLLLSWQKGGTHGE

>DM059_24745
MESSVVAPAIVIAVTDECSEQWRDVLLGIEEEGIPFVLQPQTGGDLIHHAWQAAQRSPLQVGIACDRERLIVHYKNLPASTPLFSLMYH

>DM059_24750
IVHYKNLPASTPLFSLMYHQNRLARRNTGNNAARLVKGIPFRDRHA

>DM059_24755
MNNALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAV

>DM059_24760
MNHAMLQRIVEEVAARLLRRALSTATLSVAQLGEADIRSLLCQHASLRIVQVDLPLLEQLAGQRALAAAGCALHEAMAWGVRVQLTLLPAQLPALAVKKLARLPLTFSDPLGQPVRLHAASVLTYADVARFSGGYLVLRRRPIITALAREAAVARHVQLIKQE

>DM059_24765
MDKQQLASTVNKVLDEMRQRPIPIGISSRHIHLAAADYARLFPAQPIQPKKALLQPGQYAAEQTVTLVGPKGRLNNVRLLGPLRQTSQVEISRTDARILGIAAPLRMSGNLQGTPGIRLISPFAELELSGGTIVAQRHIHMSPLDALILRVSHGDSVAVAIEGSDRRLIFDNVAVRVAPDMRLEMHIDTDEANAAGADAAQAWATLVTKP

>DM059_24770
MKQSLGLLEVSGLALAITCADAMAKAAAITLLALEKTNGSGWMVVKIAGDVASVQAAVMTGAELAERQQGLVAQKVIARPGEGLLPARVQAPSPAPDVAVTEENTALTDAPSHSTERVTCNLCLDPHCPRQKGDPRSQCLHAGKRGDA

>DM059_24775
QLIGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASVVGEVKSSHVIPRPHSDVEAILPKSV

>DM059_24780
MNTAELETLIRTILSEKLAPTPPAPQQEQGIFCDVGSAIDAAHQAFLRYQQCPLKTRSAIISALRETLAPELATLAEESATETGMGNKEDKYLKNKAALENTPGIEDLTTSALTGDGGMVLFEYSPFGVIGAVAPSTNPTETIINNSIS

>DM059_24785
MAIYTRTGDACSTSLFTGQRVSKTHPRVEAYGTLDELNAMLSLCVCAVAEEEQRTLLEALQQHIFWFSAELASDSEQPSPGKRYISSEEIALLEQTIDREMARVPALHQFVLPGRCEAASRLHLARTVARRAERRLVELAAEVTIRQMLLRYLNRLSDCLYALARSEDHAAHQRRLVTEIAARYLAASRSPAPDAPKAQAGSLSFHELHQLIRQAIEHARQLQVPVVISIVDAHGTETVTWRMPDALLVSSELAPKKAWTAVAMKTATHELATTVQPGAALYGLESHLQGKVVTFGGGYPLWRDGQLIAGLGISGGSVEQDMAIAQAAMAAINVRTHQ

>DM059_24790
DEVAVDSVGAGVGELVLLCSGSSARHVFSGPNEAIDLAVVGIVDSLSR

>DM059_24795
INNSISMLAAGNSVYFSPHPGAKKVSLKLIARIEEIAYRCSGIRNLVVTVAEPTFEATQQMMSHPLIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVK

>DM059_24800
MTQAIGILELTSIARGMELGDVMLKSANVQLLLCRTLCPGKFLLMLGGDVGAVQQAIAAGTARAGEMLVDSLVLANIHPSVLPAISGLN

>DM059_24805
MSEAIVPLSSIDATEIRERVRAAGVVGAGGAGFPTHIKLQARVDTVLVNAAECEPMLKVDQQLMAQQADRLIRGLGYAMTATGAREGIIALKAKYAPAIAALTPRLPEWARLHILPDVYPAGDEVLTIWLATGRRVPPAALPVSVGVVVNNVQTVLNIARAVEQGYPVTRRTLTVNGAVARPLTLAVPLGISLREVLDLAGGATVDDPGFINGGPMMGSLITSLETPVTKTTGGLLVLPGNHPLIQRRRQDERTLLAIARTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNYRQAATPSLLLSALTCSECNVCESVACPVGISPMRINRLLKRELRAKNLRYDGPLRPADEMAKHRLVPVKRLISKLGLDPWYQEAPLTAVEPEVACVTLPLRQHIGISAVPCVAPGERVTRGQLLADIPADALGAPVHASIDGLVSAITEQAITLVRG

>DM059_24810
MHTFSLQTRLYSGPGSLAALQRFSHQHIWIVCDGFLARSPLLDRLRAALPASNRVSVFSDITPDPTIHTVAKGIAQMQALRPQVVIGFGGGSAMDAAKAIVWFSQQGGLPVDTCVAIPTTSGTGSEVTSACVISDPEKGIKYPLFHEALCPDMAIIDPTLVVSVPPTITAHTGLDALTHALEAWVSPQATDFTDALAEKAARLVFRALPVAIRQGDCIATRSKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTAVIRFNAGEPRAAKRYARLARACRFCPPEAGEQEAFQALLTAVETLKQQCAIPTLKGALQEKYPLFLSRIPAMVPAALADATLRTNPRPVDGAAIAQLLENLQ

>DM059_24815
LHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARLRRCVLTNGFSIR

>DM059_24820
MKRLMLIGPSQCGKTTLTQVLRGETLRYQKTQAIVWTPAAIDTPGEYLENRCLYSALLTSACEADVIALVLNADAPWSPFSPGFTAPMNRPVIGVITKADLAAPPRLQQVRTWLEAAGAGHIFITSALTGDGLDDLFACLNAEEYQ

>DM059_24825
MEPQTPTERMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALRQVTRTLGELMRFTACPITRT

>DM059_24830
GKCYMVVAGDIADVDNAVTVASDSAGEKGLLVHRTVIPRPHDALWQQLMEG

>DM059_24835
FITSALTGDGLDDLFACLNAEEYQ

>DM059_24840
MTYKIMAINAGSSSLKFQLLNMPQGALLCQGLIERIGLPEARFTLKTSAQKWQETLPIADHHEAVTLLLEALTGRGI

>DM059_24845
RLAELAPLHNPVNALGMRLFRQLLPAVPAVAVFDTAFHQTLAPEAWLYPLPWRYYAELGIRRYGFHGTSHHYVSSALAEKLGVPLSALRVVSCHLGNGCSVCAIKGGQSVNTSMGFTPQSGVMMGTRSGDIDPSILPWLVEKEGKSALQLSQLLNNESGLLGVSGVSSDYRDVEQAADAGNERAALALSLFAERIRATIGSYIMQMGGLDALIFTGGIGENSARARATICRNLHFLGLALDDEKNQRSATFIQADNALVKVAVINTNEELMIARDVMRLALPQARELAVS

>DM059_24850
MRPGEGKRKGENVAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVEVETGVPRKDERPLSRAMVNQLLAHWGYPPALSQQIRITLHSTIPVAKGMASSTADIAATAVATAHHLGHLLDEPTLARLCVALEPTDSTLFRQLTLFDHNTAATQIACPPPPALDLLVLESPLTLRTTDYHQLPREPGLLANASRLQLAWEKVQQACHCGSPQLLGEAATISAIASQQLLPKPGFDALLDLVESAGLYGLNVAHSGSVVGLLLDRRRHDVEFLQWRLADSDIAAHWPQQHLLAMVPGGVILQ

>DM059_24855
IVIPGFAEYRRALQTVDCEVVEYALRERDGWQLTDAILDALTPALDCLFLCTPNNPTGLLPERGLLEAIAQRCRALNISLILDEAFLDFIPDQPGFIPLLAQHPHVWVLRSLTKFYAIPGLRLGYLLNADAQAVARLRARQMPWSINAYAALAGEIILQDRAYQRATWQWLQEEGARFYAQLQEMAGLTVWPGRANYLFLRCDRADFDLQYALLRQHVLIRSCANYPGLDSRYFRVAIRSAEENDQLLAALRRVLA

>DM059_24860
MALLKSAHGGNIREAAALLGIAPGELLDFSANINPLGMPASLRQAIVDNPGCAERYPDVEYQQLHQALAAHHQLPAAHILAGNGETESIFTLVHGLKPRRAMIVIPGFAEYRRALQTVDCEVVEYALRE

>DM059_24865
MSGNNSGLSRRRLLQGAGAMWLMSVSPVGLAAAARVVAVRVWPASTYTRVTVESNHVLKYRQFALSNPERVVVDLEGVNLNSVLKGMGGQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANATDVQDPLLALLEDYNKGDLERQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYRTREKDVVLQIARRLRALIDKEGNMKAYMTRNEDVFIPLKVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLEKMGNINNLHKNRVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTAKFQQEVAESILAGIKAYFADGATLARRG

>DM059_24870
MVKERRTELVEGFRHSVPYINAHRGKTFVIMLGGEAIEHENFSNIVNDIGLLHSLGIRLVVVYGARPQIDANLAEHHHEPVYHKQTRVTDAKTLELVKQAAGMLQLEITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEEAIHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVYNQA

>DM059_24875
RELVYTAITRAKRRLSLYADEQVLSQAIVTRTERRSGLAEIFAGREAP

>DM059_24880
METKPNWLVRHINLITTAVALYPWLLMILLLWDNQRHHQHGYAALGAAIAILFLLALTSGMNLLISSLVIFCARCSTPPLAGGAAVRFFAMNSISALWLIPLFFSY

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021