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BMC type: PDU1AB


Organism: Yersinia massiliensis. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

      DA391_08040 (fasta) HMM00288_1_pdu PDU1AB (details)
            DA391_08045 (fasta) HMMreg00392_2_grm2 EUT2A (details)
                 DA391_08050 (fasta)
                        DA391_08055 (fasta) HMMacetkin_1 PDU1AB (details)
                          DA391_08060 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                            DA391_08065 (fasta) Hp_euts_babyPurple PDU1AB (details)
                               DA391_08070 (fasta) Ts_dodgerBlue PDU1AB (details)
                                       DA391_08075 (fasta) HMMPduS_1_all PDU1AB (details)
                                              DA391_08080 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                      DA391_08085 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                            DA391_08090 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                             DA391_08095 (fasta) P_babyPink PDU1AB (details)
                                                                DA391_08100 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                                    DA391_08105 (fasta) HMMptac_2_mix PDU1AB (details)
                                                                        DA391_08110 (fasta) H_driedBlood PDU1AB (details)
                                                                         DA391_08115 (fasta) H_tan PDU1AB (details)
                                                                           DA391_08120 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                                                                      DA391_08125 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                                                         DA391_08130 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                                                                                             DA391_08135 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                                                                                                       DA391_08140 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                                                                                            DA391_08145 (fasta) Tsp_greenishBeige PDU1AB (details)
                                                                                                             DA391_08150 (fasta) H_robinEggBlue GRM3C (details)
                                                                                                                  DA391_08155 (fasta)
                                                                                                                       DA391_08160 (fasta) HMM10114PocR_1_pdu1 PDU1AB (details)
                                                                                                                                DA391_08165 (fasta)
                                                                                                                                      DA391_08170 (fasta)
                                                                                                                                          DA391_08175 (fasta)
                                                                                                                                                 DA391_08180 (fasta)
                                                                                                                                                    DA391_08185 (fasta)
                                                                                                                                                       DA391_08190 (fasta)
                                                                                                                                                            DA391_08195 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_robinEggBlue
       H_driedBlood
       H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

       Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>DA391_08040
MAEARCPASCGELIQGWILGGEKLISCPVNWFSTVSVSDGVPNGHERPRMRQMLAAVLAYFDHPADMARGLNICFDSTIPVAKGLASSTADIAATAMATARHLGKTLDEAALAALCVSLEPTDSTLFQQLTLFDHQTAATQISYDWQPAVDILLLESPQILNTEDYHRRDRQPALLASAASLAQAWQLFTQAAEQRDCSLLGQATTLSAQASQRLLVKPDFAALMTLVESLDLYGLNVAHSGSVVGLLLDRQRHDVEKLYWQLQQHHITQNYPHQHLLTMVSGGVR

>DA391_08045
MSEHGGNVLEMALKIGTDAENIIDFSANINPLGMPESLKTAIVAQLNRAERYPDVKYRQLHSALARVHHCQPENIMAGNGATELIYAIVHHLQPRTALLLTPGFAEYRRALQRVGCQISDYAMSEADGFQPDERLLDVLAQSRPDCLFLATPNNPTGLMPDAALLQAIVQCCHQYQIALIVDEAFIDFLPEATGLTPQLAAFPRLYVLRSLTKFFAIPGLRLGYLLSGDQVAIAQMKQLREPWTINAFAALAGEIILDDHAYIQATHQWLAQQQRWLYQQLCSLPALRVWQGAANYIFLRCLKPEIDLQQALLQHHILIRHCANYPALTRDHYRVAVKSAADNQRLITALQQVLGHG

>DA391_08050
MKSGKVWLVGAGPGDAALITVKGLHAIRQAEALVYDRLVCAELLAEAPDGCEMINVGKNPNHHLVPQPEINQILVDCALRGLNVVRLKGGDPYVFGRGGEEAEALALAEIPFEVVPGISSAIGGLAYAGIPVTHRDYASGFHVITGHLRQGNEPQDWATLAKLEGTLVILMGMTQLATICQQLIAAGKAPTTPAAVVMYASHQQQQVASGTLTTLADQATAQGLSAPALIVIGDVVRLRDILAFTPEALSLSSIPSLISPLSLAL

>DA391_08055
MPGKIMAINAGSSSLKFQLFSMFNAQTGQADEQVLCQGLIERIGMDDAVFNLRAGDVKWRETLPIADCRQGAEHLLHALIEHNIIDSLAEITGVGHRVAHGGEAFADSVLITPDVLAQIEQLGVLAPLHNPVNALGIRVFQQALPHASAVAVFDTAFHQTLSQTSYLYALPWRYYEELGIRRYGFHGTSHKYVSGVCAERMGRPLESLRIVSCHLGNGSSLCAIGNGRSVNTSMGFTPQAGIMMGTRSGDIDPSILPFIQQTEGKSAAEINQLINNQSGLLGVSGISHDYRDVEQAANNGDTRAQVALELFAERIRAVIGSYIVQLGGIDALIFTGGIGENARHARQQICRDLAFLGIELDEEKNQKNQFFIQKETGPVQIAIVNTNEELMIARDVMRVAQTLPVQPALAIQ

>DA391_08060
MQRIMLIGPSQCGKTSLIQRLRGETLNYQKTQSIIWQDNAIDTPGEYLENRCLYSALLASACEADVVGLVQNADATQSWFAPMLAQVFNKPVIGIISKADTVSHPDQLNWAAEGLQQAGAQNIFITSAQTGEGLTDLMTYLNHSGESHAR

>DA391_08065
MENSSTPERVIQEYVPGKQITLAHLIANPNKALYKKLGLNDVSSAIGILTITPSEASIIASDIATKSGAVEIGFIDRFTGAVVFTGDVSAVEYALKQVIHTLGDMMKFTACPMTRT

>DA391_08070
MSQAIGIVELSSIAKGMEVCDLMLKSANVSLLVSKTLCPGKYLLMVGGDIGAVSQSVQNGEKHSGHLLVDSIVLPNLHPSVLPAISGLNTVQNRQAAGVVETWSVAACITAADRAVKAANVTLVRIHMAFGIGGKCYQVLSGDIADVQTAVDVASQCAGEKGLLVYSTVISRPHEALWRQLVQEA

>DA391_08075
MSDLQMPLAPLLSAPLACGELAQCDAATIQQRVRDAGVVGAGGAGFPTAVKLQAKAEIFLVNAAECEPMLKVDQQLIPREAARLVRGVIYGMVATGAREGIIALKAKYDAAIAALTPLLPPQIRLHILPDVYPAGDEVITIWLATGRRVPPAALPVSIGVVVNNVQTLLNVARAVEQQWPVTRRTLTVNGAVARPLTLTVPLGTSLREVLALAGGATIDNPAYINGGPMMGHALHDLDQPVTKTTGGLLVLPADHLLITRRARSDQDVLAIARAVCEQCRMCTELCPRHLIGHELPPHLLVRAIIYQQVATPDILLSALTCSECGLCESYACPVDISPMRINRLLKTQLRAQGARYQGELREADPMANYRMVPISRLIARLDLTDWYQPAPFIDLDVAPQQVVIPLRQHIGAAAEPVVAVGEQVQRGQLIGQIPPNALGAPVHASIRGVVTDISAHAITLRCDHEEE

>DA391_08080
MKTFFLQTRIYSGEGSLKVLQRFHQRKIWIICDGFLATSPLLDRLKQALPADNQISLFSDITPDPNISTVVKGIEQMQTLHPDVVIGFGGGSALDAAKAIVWFSRQQGLEIETCIAIPTTSGTGSEVTSACVISDPEKSIKYPLFDDEIYPDIAILDPALVVTVPPVITANTGLDVLTHALEAYVSPRASDFTDALAEKAVQLVFRHLPTACKKGDCLITRGKMHNASTLAGMAFSQAGLGINHAIAHQLGGQFHIAHGLANALLLVPVIRFNAIDTRAQKRYARLAKLCHFSPANADDRSAVNQLIHQIEQLKRQCGLPQPLAAMKVTERELTQRIPDIITAALADVTLRTNPRAADDKAIRSIVEALYE

>DA391_08085
MNTNDLETLIRTILTEQLTPATASASSAIFASVDEAVNAAHSAFLRYQQSPMKTRSAIISALREQLKPQLASLSERGASETGMGNKEDKYLKNKAALENTPGIEDLSTTALTGDGGMVLFEYSPFGVIGSVAPSTNPTETIINNSISMLAAGNAVYFSPHPGAKAVSLDLIAQIEAIIFNSCGIRNLVVTVQEPSFEATQQMMAHDKIPLLAITGGPAIVAMGMKSGKKVIGAGAGNPPCLVDETAELAKAAQDIVSGASFDYNLPCIAEKSLIVVESVADRLLQQMQAFDALLISNPQDVDSLRKACLTPQGHANKNLVGKSPIELLKAAGLACPAKAPRLLLVEVAGDDPLVTTEQLMPLLPVVRVKDFDAALTLALQVEGGLHHTATMHSQNVSRLNLAARLLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARQRRCVLTNGFSIR

>DA391_08090
MSIYTKTGDAGTTALFTGQRVKKSHPRVETYGTLDELNAALSLCARVMQGEENRQLIDAVQHQLFYFSAELASEGIEVPPVGRKSISEQDIHALEQAVDRCMAQLPPVKGFILPGDTEAGSRLHFARTLARRCERRLIELAEQVPVRSVLLQYLNRLSDCLYALARDEDQRQQLQHTAQTVLARYLAATQETQPATKTRPTATGLGFSDVHQLVKLAVEAAMTLDIAVVVALTDRHGNLIMTYRMPDTLLVSSELAPKKAWTAVALKAATHQLSSAVQPGADLFQLEASTGGKVVSFGGGYPLWRDGQLVGGLGISGGSVEQDMHIAEAAISALHLRNE

>DA391_08095
MQLARVVGSVVSTQKSPTLIGKKLLLVRRVAGDGSLPPDSKTPDEVAVDSVGAGQGELVLLAGGSSARRVFAEPNDAIDLAIVAIVDECSY

>DA391_08100
MTLTQAQTEQLVSQIVTRLTERERRVHALLLPQLRAGLEPWVFVRHATLHLMLPDLAFMHRLAQSDSQCPAVNALNEAWSWGMKVHISLHRQLLPALPAAALRRMPLSLSDNQGVAVRLHAGRVLGYRDIATLSCGWLLIDAHTLVTPLAQDTVSARHIQLLRQE

>DA391_08105
MEKALLEPVVSKILDEMRLRPIPLGVSNRHLHLSAQDYQRLFPEQPLLEKKALLQPGQYAAEQTVTLVGPKGSLKNVRILGPLRSQSQVEISRTDARTLGINAPLRMSGNLEGTPAIRLVSPYGEVELPHGVIVALRHIHMSPLDALIYRVKHGDRVQVAIQGSGRRLIMDDVAIRVSPQMKLEMHIDTDEANAAGADDPAAFATLLMPSRTAQS

>DA391_08110
MKTSLGLLEVSGLALAIGAADAMAKAASVNLIGIEKTNGSGWMLIRLTGDVASVQAAISTGAAFAEQHHGLVSRAVLARPADSLMAYWQAPTEAITVEVQVTLDPVNKPVSEGVSELEAEVEVEVVEVKKAEAPAINEAQTEEIDAPKPAETATDDAPDTVVSLEKKRIESEALQAPRVSCNLCLDPACRRHKGEPRFRCIHLGKRGKV

>DA391_08115
MNNALGLVETKGLVAAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSVAASAVGEVMSCHVIPRPHSDVEAILPTSA

>DA391_08120
MNFANDAPAIVISLTTPTPPAVWHQVLLGIEEEGIPWQWQQDEEGDAILRAWQAATRSPLLVGLACSADEVVVHFRHLPPTNPLFRLAWAQNDDQLRQLGNNAARLVKGLPFKSSP

>DA391_08125
MGRYIVGVDIGNSSTEVALATCAADGQLQFVTSALTETTGIKGTQRNIFGINKALALLTEKAGIALSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGLGLGVGLTITIDELVTRDPTQPYILVVPATVDFADVAAVVNAATGAGYRITAIILQRDDGVLVSNRLTHPVPIVDEVLYIDRIPMGMLAAVEVAMPGQVIETLSNPYGIATVFELSAEETKNIVPVARALIGTRSAVVVKTPEGDVKARSIPAGHLVLFADGRTVQVDVATGSEAIMTAVNSFRHLDNVSGEAGTNIGGMLEHVRQTMAELTNKPTNEIFIQDLLAVDTAVPVNVIGGLAGEFSLEQAVGIASMVKSDRLQMAHIASEIEKTLGIDVQVGGAEAEAAILGALTTPGTRRPLAILDLGAGSTDASIINAQGQIVATHLAGAGDMVTMIIASELDLQDRYLAEDIKKYPLAKVESLFHLRHEDGSVQFFPHPLAPEVFARLVVVKPEGLVPLPGDYALEKVRNIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALSHFKLVAGRGNIRAVEGPRNAVATGLILAFQRERNA

>DA391_08130
MNSEAIESMVRDVLNKMNSLQGQTPAAACPAPAASTRSDAKVSDYPLANKHPEWVKTATNKTLDDLTLANVLNGSVTSQDLRITPEILRIQASIAKDAGRPLLAMNFERAAELTAVPDDKVLDIYNALRPYRSSKEELNAIADDLEQNYKATICATFVREAAVLYVQRKKLKGDD

>DA391_08135
MVDINEKLLRQIIEGVLQEMQGDNNTVSFKQPSQPAAASTAVASGDFLTEVGEARPGNNQDEVIIAVGPAFGLSQTANIVGIPHKNILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQQGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL

>DA391_08140
MKSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIENGVVTELDGKPQSSFDLIDHFIARYGINLAHAEEVMKMDSIKLANMLCDPNVSRRTIVPLTTAMTPAKIVEVVSHMNVVEMMMSMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAFRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCVGVPSAVPSGIRAILAENLICSALDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVMQRDLKVDGGLRPVLEADVVAIRNKAARALQAVFAGMGLPPITDEEVIAATYAHGSKDMPERNIVEDIKFAQEIISKNRTGLEVVKALAQGGFEDVAQDMLNIQKAKIAGDYLHTSAIIKGDNQVLSAVNDVNDYAGPATGYRLEGARWEEIKNIPNALDPNELG

>DA391_08145
MKSNDLVDQIMAQVIAKVSEHAPASSTQPAHKQRDTAMAEKTCSLTEFVGTAIGDTVGLVIANVDTALLDAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIIFGGDDVSDVKRAVEVALKELDRTFGDVYANEAGHIELQYSARASHALEKAFGAPLGRSCGVIVGAPASIGVLMADTAVKSANVDVVAYSSPAQGTSFSNEVILVISGDSGAVRQAVISAREIGKTVLGTLGAEPKNDRPSYI

>DA391_08150
MQQEALGMVETKGLTAAIEAADTMVKSANVTLVGYEKIGSGLVTVIVRGDVGAVKAATDAGASAAAKVGEVKSTHVIPRPHTDVEAFLPKSRSPKGHNE

>DA391_08155
MNDSLKAQCIAEFLGTGLFLFFGISCLAALKVAGASFGLWEICIVWGLGISLAVYLTAGISGAHLNPAITIALWLFACFPGRKVIPYSIAQIAGAFGGAALSYLLYHNLFTDFETAHQMVRGSVESLQLASIFSTFPSPAISVWQAAFVEIVITSILMGLIMALTDDGNGVPRGALGPLLIGILVAVIGASTGPLTGFAMNPARDFGPKIFTFLAGWGKISMTGGREIPYFIVPIIAPIIGACLGAAVYRVFIGKNLACNACKLEDEEATH

>DA391_08160
MISASSLNSELINKIAQDFAQATGLAVVVVNIHGEEISDLFNFTPFCQLMRQDPVNHLRCRMSDRCGGLEASKSNEPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLHSDVYLIDILNVDNHWQQNPALMDEFHNVPIMDFSRVIASADLLKLIVENCLKKHLNFVVINDNMGSKDPGRARPVHPHDSKMKKVLRYIDTHLSEELRLEDVASKVYLSPYYFSKLFKKYQGIGFNAWVNQQRMANAREMLQHSDWSIASIAKNLGFSQTSYFCKVFRQTYNVTPQVFRSLSSDRNEME

>DA391_08165
MQRSGKQAFIIAGTGSGCGKTTVTLGLLRALMARGLSVQPFKVGPDYLDTGWHSAVSGVMSRNLDAFMLPVETLNGLYNQHMRHADVAVIEGVMGLYDGYGTDPNYCSSAAMAKQLGCPVILLVDGKAVSTSVAATVMGFCQFDPDLVIAGVIVNRVNSDSHYQLLRHAIEHYCGIPVLGRVPVMDDVALPSRHLGLVPAQERDGSRPNQRLQPDSDPRWQRLAQQIEETIDLDRLLALTQCATLPAGTPPTLPPQALAEGLTLALADDEAFNFYYPDNLDLLEQAGVRIQRFSPLHDRQLPDCQMIYLGGGYPEVHAAKLAANTAMHSALRQAHHQQIPLYAECGGLMYLGEGLTDADAQHHRMVGILAGESHMGKRLTRFGYCQAQARTDTLLAAQGETLRGHEFHYSDFTSTLTPVFDSSKWRDGVAIQRWHSGYQVQRTQASYLHIHFAQRPGLLNGWLNAARSLL

>DA391_08170
MTLAAWFVAFLLDSWLGDPPHWPHPVRWIGNMITVLQRAIRSVCRSERALKWGGALLWLVVVGVTWGVSWGFLWLMTQIHPWLGWVAQVWMIYTLLAGRCLSEAALLVYDALQHGSLAQSREKLSWIVGRDTSQLEKPQMTRAVVETVAENSVDGVIAPLFFLLLGGAPLAMAYKAVNTLDSMVGYKTPKYRAIGYVSARMDDLANWLPARLSWLLLSAAAWFIQADYRQALRIGWRDRYQHSSPNCAWSEATVAGALGVRLGGPNDYFGERVEKPWIGDAQREVALNDIPRSIHLMLMASLLALLLFALIHLLLVGI

>DA391_08175
MNYIQNPQQIEQNSFVIIGDIIAEQRPEYRFASAMHEAVIKRAIHTTADFDWLDILHFSPQVLTHITEGLKRGCTLYTDTTMAMSGINKTLLKQMGCECRCYISDPRVVESAPQQGITRSMAAVDVALAEPGEKLFVFGNAPTALFRLLERQATPVAVIGVPVGFVGAAESKEALAQSDLPCIAALGRKGGSNVAAAIINAILYQLRGAL

>DA391_08180
MSDTVVSHEQANDVEQQQLSLDSIWHNGKQYRKGYTTGSCATAAAKVAALMVLRQQVIDQISIVTPSGITLNLNVEQPLIEGRQATAAIRKDGGDDVDATHGMLIFARVTVFESTDDLPQQTDITLRGGEGVGTVTRKGIGLPVGSSAINRTPQQTIEAAVREVIGPLRGASVEIFAPEGEERAKKTYNGRLGILGGISIIGTTGIVTPMSEESWKRSLALELEMKRAAGEDRVILVPGNHGERFVRDHLGLDSQRVVTMSNFVGYMLQETVRLGFRRVLLVGHPGKLVKVAAGIFHTHSHIADGRMETLVANLALMGAPHALLLEVNQCDTTEAAMELIAEQGWQQVYTRIAERICERINEMVRFSVNPPQCDAILFSFDNQVLGSSRPLDEILEALR

>DA391_08185
MITVVGIGPGDTQYLTPRAQQAISLAEVLVGGKRHLATFGGHGRETRLLDADLLGLLEWLDSQKSRDIVVLASGDPLLYGIGKLLAANFSPDQLQIIPGISAIQYLCAKVALDMNDLFLTSSHGREPDFDWIFQHDKVAMVTDGIIGPRAIANALWQRDLERTLIIGENLSQPNERIHRLSVDQVAARYDMNVVVILNER

>DA391_08190
MRDEFFIRGQNARGQKVPMTKEAVRVLALARLELNDARHLIDVGAGTGSVALEAALQFPHLRVTAIERNPAALALISENRQRLACHNVDIIAGVAPLLVEDHADAIFIGGSGGQLTELIDWALMMLNPNGRLVLTFILLNNLNDALSHLQTCAVSQLDCVQLQLSSLTPLGSGHYFKPNNPTYLISCHKEARHV

>DA391_08195
MFEQPKNVPADNANTPFSPVWDSQKVWFVGAGPGDKELITLKGYRLLQQAQVVIYAGSLINTELLEYCSPEAECHDSAGLNLEQIIRLMVDGVRAGKLVVRLQTGDLSLYGSIREQGEVLGEHGIGFVSVPGVSAFLGAAAQLGVEYTVPEVAQSLIITRIEGRTPMPPREQLEAFAAHQTSMAIFLSVQEVDRVAERLIAGGYPADTPVAVVYKATWAESRTVRGTLTDIAELVRAAAINKTALILVGAFLGDEYHYSKLYDAGFSHEYRQA

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021