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BMC type: PDU1AB


Organism: Klebsiella pneumoniae. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

        C4Y50_023735 (fasta) HMM10114PocR_1_pdu1 PDU1AB (details)
              C4Y50_023740 (fasta)
                C4Y50_023745 (fasta) H_robinEggBlue GRM4 (details)
                      C4Y50_023750 (fasta) Tsp_greenishBeige PDU1AB (details)
                                   C4Y50_023755 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                        C4Y50_023760 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                                            C4Y50_023765 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                                               C4Y50_023775 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                                 C4Y50_023780 (fasta) H_tan PDU1AB (details)
                                                    C4Y50_023785 (fasta) H_driedBlood PDU1AB (details)
                                                         C4Y50_023790 (fasta) HMMptac_2_mix PDU1AB (details)
                                                             C4Y50_023795 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                               C4Y50_023800 (fasta) P_babyPink PDU1AB (details)
                                                                       C4Y50_023805 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                                  C4Y50_023810 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                                                           C4Y50_023815 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                                                                      C4Y50_023820 (fasta) HMMPduS_1_all PDU1AB (details)
                                                                                                          C4Y50_023825 (fasta) Ts_dodgerBlue PDU1AB (details)
                                                                                                            C4Y50_023830 (fasta) Hp_euts_babyPurple PDU1AB (details)
                                                                                                               C4Y50_023835 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                                                                                                                         C4Y50_023840 (fasta) HMMacetkin_1 PDU1AB (details)
                                                                                                                                C4Y50_023845 (fasta) HMM00288_1_pdu PDU1AB (details)
                                                                                                                                        C4Y50_023850 (fasta) HMMreg00392_2_grm2 EUT2A (details)
                                                                                                                                                  C4Y50_023855 (fasta)
                                                                                                                                                             C4Y50_023860 (fasta)
                                                                                                                                                               C4Y50_023865 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_robinEggBlue
       H_driedBlood
       H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

       Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>C4Y50_023735
MISASTLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPFCQLMRQHPEHSGRCRMSDRCGGLEASKKDQLCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDVELVDILNVDDRWQDDPALVQAFRDVPEMDYSRVITSADLLKLIVENCLKKQLNFVVIKDNPSQNDPAQASRAPSPHDGKMKKALRYIDAHLSDELRLEDVAAHVYLSPYYFSKLFKKYQGIGFNAWVNQQRMASAKELLCHSDWSIASIARNLGFSQTSYFCKVFRQTYQVTPQAFRQQINAGSQTESF

>C4Y50_023740
MNGSLRAQCIAEFLGTGLFLFFGICCLSALKLTGASLGLWEICIIWGLGISLAVYLTAGISGGHLNPAVTVALWLFACFPGRKVVPYIVAQVAGAFGGAVLAWILYSTLFTQFETVHHMVRGSLESLQLASIFSTYPAPELSIWHAALVEVVITSMLMGMIMALTDDGNGVPKGPLAPLLIGILVAVIGASTGPLTGFAMNPARDFGPKLFTWFAGWGNIAMTGGRNIPYFIVPIIAPLLGACLGAAIYRFLIANNLPCHTCVEEENTR

>C4Y50_023745
MQQEALGMVETKGLTAAIEAADAMVKSANVLLVGYERIGSGLVTVIVRGDVGAVKAATDAGAAAARHVGEVKAVHVIPRPHTDVEKILPKGNSQ

>C4Y50_023750
MSSNELVEQIMAQVIARVATPEQQALPDTPHPTGETAMAEKSCSLTEFVGTAIGDTLGLVIANVDAALLEAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIVLGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFGAPLGRACGIIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVISAREIGKTVLATLGAEPKNDRPSYI

>C4Y50_023755
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIRIVNGAVTELDGKPVEQFDLIDHFIARYGINLARAEEVMAMDSVKLANMLCDPNVKRSDIVPFTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNIKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSALDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAKGGFPDVAQDMLNIQKAKLTGDYLHTSAIIVGEGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNELG

>C4Y50_023760
MEINETLLRQIIEEVLSEMKSGADKPVSFSAPAASVASAAPVAVAPVSGDSFLTEIGEAKPGTQQDEVIIAVGPAFGLAQTANIVGIPHKNILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQRGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL

>C4Y50_023765
MNTDAIESMVRDVLSRMNSLQDGVTPAPATPTNDTVRQPKVSDYPLATRHPEWVKTATNKTLDDLTLENVLSDRVTAQDMRITPETLRMQAAIAQDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTQAELLAIADDLEHRYQARLCAAFVREAAGLYIERKKLKGDD

>C4Y50_023775
MRSPADYSLRGKKEAHMESSVVAPAIVIAVTDECSEQWRDVLLGIEEEGIPFVLQPQTGGDLVHHAWQAAQRSPLQVGIACDRERLIVHYKNLPASTPLFSLMYHQNRLARRNTGNNAARLVKGIPFRDRNA

>C4Y50_023780
MNNALGLVETKGLVGAIEAADAMVKSANVQLIGYEKIGSGLITVMVRGDVGAVKAAVDAGSAAASVVGEVKSSHVIPRPHSDVEAILPKSV

>C4Y50_023785
MKQSLGLLEVSGLALAITCADAMAKAAAITLLALEKTNGSGWMVVKIAGDVASVQAAVMTGAELAERQQGLVAQKVIARPGEGLLPARVQAPSPAPDVAVTEENTALTDAPSHSTERVTCNLCLDPHCPRQKGDPRSQCLHAGKRGDA

>C4Y50_023790
MDKQQLASTVNKVLDEMRQRPIPIGISSRHIHLAAADYARLFPAQPIQPKKALLQPGQYAAEQTVTLVGPKGRLNNVRLLGPLRQTSQVEISRTDARILGIAAPLRMSGNLQGTPGIRLISPFAELELSGGTIVAQRHIHMSPLDALILRVSHGDSVAVAIEGSDRRLIFDNVAVRVAPDMRLEMHIDTDEANAAGADAAQAWATLVTKP

>C4Y50_023795
MNHAMLQRIVEEVAARLLRRALSTATLSVAQLGEADIRSLLCQHASLRIVQVDLPLLEQLAGQRALAAAGCALHEAMAWGVRVQLTLLPALLPALAVKKLARLPLTFSDPLGQPVRLHAASVLTYADVARFSGGYLVLRRRPIITALAREAAVARHVQLIKQE

>C4Y50_023800
MHLARVTGAVVSTQKSPSLNGKKMLLVRRVSADDDRPILPTSGDEVAVDSVGAGVGELVLLCSGSSARHVFSGPNEAIDLAVVGIVDSLSR

>C4Y50_023805
MAIYTRTGDAGSTSLFTGQRVSKTHPRVEAYGTLDELNAMLSLCVCAVAEEEQRTLLEALQQHIFWFSAELASDSEQPSPGKRYISSEEIALLEQTIDREMARVPALHQFVLPGRCEAASRLHLARTVARRAERRLVELAAEVTIRQILLRYLNRLSDCLYALARSEDHAAHQRRLVTEIAARYLAASGSPAPDAPKAQAGSLSFHELHQLIRQAIEHARQLQVPVVVSIVDAHGTETVTWRMPDALLVSSELAPKKAWTAVAMKTATHELATTVQPGAALYGLESHLQGKVVTFGGGYPLWRDGQLIAGIGISGGSVEQDMAIAQAAMAAINVRTHQ

>C4Y50_023810
MNTAELETLIRTILSEKLAPTPPALQQEQGIFCDVGSAIDAAHQAFLRYQQCPLKTRSAIISALRETLAPELATLAEESATETGMGNKEDKYLKNKAALENTPGIEDLTTSALTGDGGMVLFEYSPFGVIGAVAPSTNPTETIINNSISMLAAGNSVYFSPHPGAKKVSLKLIARIEEIAYRCSGIRNLVVTVAEPTFEATQQMMSHPLIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIISGAAFDYNLPCIAEKSLIVVASVADRLIQQMQDFDALLLSRQEADTLRAVCLPDGAANKKLVGKSPAALLAAAGLAVPPRPPRLLIAEVEANDPWVTCEQLMPVLPIVRVADFDSALALALRVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARLRRCVLTNGFSIR

>C4Y50_023815
MHTFSLQTRLYSGPGSLAALQRFSHQHIWIVCDGFLARSPLLDRLRAALPASNRVSVFSDITPDPTIYTVAKGIAQMQALRPQVVIGFGGGSAMDAAKAIVWFSQQGGLPVDTCVAIPTTSGTGSEVTSACVISDPEKGIKYPLFHEALCPDMAIIDPTLVVSVPPTITAHTGLDALTHALEAWVSPQATDFTDALAEKAARLVFRALPVAIRQGDCIATRSKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTAVIRFNAGEPRAAKRYARLARACRFCPPEAGEQEAFQALLTAVETLKQQCAIPTLKGALQEKYPLFLSRIPAMVPAALADATLRTNPRPVDGAAIAQLLESLQ

>C4Y50_023820
MSEAIVPLSSIDAAEIRERVRAAGVVGAGGAGFPTHIKLQARVDTVLVNAAECEPMLKVDQQLMAQQADRLIRGLGYAMTATGAREGIIALKAKYAPAIAALTPRLPEWARLHILPDVYPAGDEVLTIWLATGRRVPPAALPVSVGVVVNNVQTVLNIARAVKQGYPVTRRTLTVNGAVARPLTLAVPLGISLREVLDLAGGATVDDPGFINGGPMMGSLITSLETPVTKTTGGLLVLPGNHPLIQRRRQDERTLLAIARTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNYRQAATPSLLLSALTCSECNVCESVACPVGISPMRINRLLKRELRAKNLRYDGPLRPADEMAKHRLVPVKRLISKLGLDPWYQEAPLTAVEPEVACVTLPLRQHIGISAVPCVAPGERVTRGQLLADIPADALGAPVHASIDGLVSAITEQAITLVRG

>C4Y50_023825
MTQAIGILELTSIARGMELGDVMLKSANVQLLLCRTLCPGKFLLMLGGDVGAVQQAIAAGTARAGEMLVDSLVLANIHPSVLPAISGLNVVGQRQAAGIVETWSVAACISAADRAVKAANVTLVRVHMAFGIGGKCYMVVAGDIADVDNAVTVASDSAGEKGLLVHRAVIPRPHDALWQQLMEG

>C4Y50_023830
MEPQTPTERMIQEYVPGKQVTLAHLIANPGKDLFKKLGLPDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALRQVTRTLGELMRFTACPITRT

>C4Y50_023835
MKRLMLIGPSQCGKTSLTQVLRGETLRYQKTQAIVWTPAAIDTPGEYLENRCLYSALLTSACEADVIALVLNADAPWSPFSPGFTAQMNRPVIGVITKADLAAPPRLQQVRTWLETAGAGHIFITSALTGDGLDDLFACLNAEEYQ

>C4Y50_023840
MTYKIMAINAGSSSLKFQLLNMPQGALLCQGLIERIGLPEARFTLKTSAQKWQETLPIADHHEAVTLLLEALTGRGILSSLQEIDGVGHRVAHGGERFKDAALVCDDTLREIERLAELAPLHNPVNALGIRLFRQLLPAVPAVAVFDTAFHQTLAPEAWLYPLPWRYYAELGIRRYGFHGTSHHYVSSALAEKLGVPLSALRVVSCHLGNGCSVCAIKGGQSVNTSMGFTPQSGVMMGTRSGDIDPSILPWLVEKEGKSAQQLNQLLNNESGLLGVSGVSSDYRDVEQAADAGNERAALALSLFAERIRATIGSYIMQMGGLDALIFTGGIGENSARARATICRNLHFLGLALDDEKNQRSATFIQADNALVKVAVINTNEELMIARDVMRLALPQARELAVSA

>C4Y50_023845
MRPGEGKRKGENVAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVEVETGVPRKDERPLSRAMVDQLLAHWGYPPALSQQIRITLHSTIPVAKGMASSTADIAATAVATAHHLGHLLDEPTLARLCVALEPTDSTLFRQLTLFDHNTAATQIACPPPPALDLLVLESPLTLRTTDYHQLPREPGLLANASRLQLAWEKVQQACHCGNPQLLGEAATISAIASQQLLPKPGFDALLDLVESAGLYGLNVAHSGSVVGLLLDRRRHDVEFLQWRLADSDIAAHWPQQHLLAMVPGGVILQ

>C4Y50_023850
MALLKSAHGGNIREAAALLGIAPGELLDFSANINPLGMPASLRQAIVDNPGCAERYPDVEYQQLHQALAAHHQLPAAHILAGNGETESIFTLVHGLKPRRAMIVIPGFAEYRRALQTVDCEVVEYALRERDGWQLTDAILDALTPALDCLFLCTPNNPTGLLPERGLLEAIAQRCRALNISLILDEAFLDFIPDQPGFIPLLAQHPHVWVLRSLTKFYAIPGLRLGYLLNADAQAVARLRARQMPWSINAYAALAGEIILQDRAYQRATWQWLQEEGARFYAQLQEMAGLTVWPGRANYLFLRCDRADFDLQYALLRQHVLIRSCANYPGLDSRYFRVAIRSAEENDQLLAALRRVLA

>C4Y50_023855
MSGNNSGLSRRRLLQGAGAMWLMSVSPVGLAAAARVVAVRVWPASTYTRVTVESNHVLKYRQFALSNPERVVVDLEGVNLNSVLKGMGGQIRADDPFIKSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANATDVQDPLLALLEDYNKGDLERQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYRTREKDVVLQIARRLRALIDKEGNMKAYMTRNEDVFIPLKVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLEKMGNINNLHKNRVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTAKFQQEVAESILAGIKAYFADGATLARRG

>C4Y50_023860
MVKERRTELVEGFRHSVPYINAHRGKTFVIMLGGEAIEHENFSNIVNDIGLLHSLGIRLVVVYGARPQIDANLAEHHHEPVYHKQTRVTDAKTLELVKQAAGMLQLEITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEEAIHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVYNQAGEIVSELFPNEAQARVEELEADEDYNSGTVRFLRGAVKACRSGVRRCHLISYQENGALLQELFSRDGIGTQIVMESAEQIRRATINDIGGILELISPLEQQGILVRRSREQLEMEIDKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQARQMGLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQMYNYQRRSKVLMADLA

>C4Y50_023865
METKPNWLVRHINLITTAVALYPWLLMILLLWDNQRHHQHGYAALGAAIAILFLLALTSGMNLLISSLVIFCARCSTPPLAGGAAVRFFAMNSISALWLIPLFFSY

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021