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BMC type: PDU1AB


Organism: Klebsiella oxytoca. Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

        AGF18_15650 (fasta) HMM10114PocR_1_pdu1 PDU1AB (details)
              AGF18_15655 (fasta)
                AGF18_15660 (fasta) H_robinEggBlue GRM4 (details)
                      AGF18_15665 (fasta) Tsp_greenishBeige PDU1AB (details)
                                  AGF18_15670 (fasta) HMMpropdeh1_1_pdu PDU1AB (details)
                                       AGF18_15675 (fasta) HMMpropdeh3_1_pdu PDU1AB (details)
                                           AGF18_15680 (fasta) HMMpropdeh2_1_pdu PDU1AB (details)
                                                         AGF18_15685 (fasta) HMM08841dhact_1_pdu PDU1AB (details)
                                                           AGF18_15690 (fasta) HMMpropdeh3_2_pdusml PDU1AB (details)
                                                             AGF18_15695 (fasta) H_tan PDU1AB (details)
                                                                AGF18_15700 (fasta) H_driedBlood PDU1AB (details)
                                                                    AGF18_15705 (fasta) HMMptac_2_mix PDU1AB (details)
                                                                       AGF18_15710 (fasta) HMM15953pduput_1_pdu1 PDU1AB (details)
                                                                         AGF18_15715 (fasta) P_babyPink PDU1AB (details)
                                                                                AGF18_15720 (fasta) HMM01923cobtr_1_pdu PDU1AB (details)
                                                                                          AGF18_15725 (fasta) HMMalddh_1_eutpdugrm PDU1AB (details)
                                                                                                  AGF18_15730 (fasta) HMM00465alcdh_3_mix PDU1AB (details)
                                                                                                            AGF18_15735 (fasta) HMMPduS_1_all PDU1AB (details)
                                                                                                                AGF18_15740 (fasta) Ts_dodgerBlue PDU1AB (details)
                                                                                                                  AGF18_15745 (fasta) Hp_euts_babyPurple PDU1AB (details)
                                                                                                                     AGF18_15750 (fasta) HMM10662PduV_1_mix PDU1AB (details)
                                                                                                                              AGF18_15755 (fasta) HMMacetkin_1 PDU1AB (details)
                                                                                                                                    AGF18_15760 (fasta) HMM00288_1_pdu PDU1AB (details)
                                                                                                                                            AGF18_15765 (fasta) HMMreg00392_2_grm2 EUT2A (details)
                                                                                                                                                     AGF18_15770 (fasta)
                                                                                                                                                               AGF18_15775 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_robinEggBlue
       H_driedBlood
       H_tan

BMC-Hp(map on tree)

       Hp_euts_babyPurple

BMC-P(map on tree)

       P_babyPink

BMC-Ts(map on tree)

       Ts_dodgerBlue

BMC-Tsp(map on tree)

       Tsp_greenishBeige

(complete list of loci)

Protein sequences:

>AGF18_15650
MISASTLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPFCQLMRQHPQHSTRCRMSDRCGGLEASKTDQLCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLSNDVELVDILNVDDRWQADPELLKTFRDVPEMDYSRVIASADLLKLIVENCLKKQLNFVVIKDNPQQPEPARASRVASPHDSKMKKALRYIDAHLSDELRLEDVAAHVYLSPYYFSKLFKKYQGIGFNAWVNHQRMVSAKELLCHSDWSIASIARNLGFSQTSYFCKVFRQAYQVTPQAYRQQINARSQTEPF

>AGF18_15655
MNDSLKAQCTAEFLGTGLFLFFGIGCLSALKVAGASLGLWEICIIWGLGISLAVYLTSGISGGHLNPAVTVALWLFACFPGRKVFPYIVSQVAGAFGGAVLAYVLYSTMFTEFESAHHIARGSVESLQLASIFSTYPATSLSIWHAALVEVVITSMLMGMIMALTDDGNGVPKGPLAPLLIGLLVAVIGASTGPLTGFAMNPARDFGPKLFTWMAGWGDIAMTGGRDIPYFIVPIIAPLIGACLGAAIYRYLIGNNLPCNTCKLED

>AGF18_15660
MQQEALGMVETKGLTAAIEAADAMVKSANVMLVGYEKIGSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRPHTDVEKILPKGISQ

>AGF18_15665
MSSNELVEQIMAQVIARVATPEQQAIPTENHPIRETAMAEKSCSLTEFVGTAIGDTLGLVIANVDTALLDAMKLEKRYRSIGILGARTGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFGAPIGRACGIIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVRQAVTSAREIGKTVLATLGSEPKNDRPSYI

>AGF18_15670
MRSKRFEALAKRPVNQDGFVKEWIEEGFIAMESPNDPKPSIKIVNGAVTELDGKPVSDFDLIDHFIARYGINLNRAEEVMAMDSVKLANMLCDPNVKRSEIVPLTTAMTPAKIVEVVSHMNVVEMMMAMQKMRARRTPSQQAHVTNVKDNPVQIAADAAEGAWRGFDEQETTVAVARYAPFNAIALLVGSQVGRPGVLTQCSLEEATELKLGMLGHTCYAETISVYGTEPVFTDGDDTPWSKGFLASSYASRGLKMRFTSGSGSEVQMGYAEGKSMLYLEARCIYITKAAGVQGLQNGSVSCIGVPSAVPSGIRAVLAENLICSSLDLECASSNDQTFTHSDMRRTARLLMQFLPGTDFISSGYSAVPNYDNMFAGSNEDAEDFDDYNVIQRDLKVDGGLRPVREEDVIAIRNKAARALQAVFAGMGLPPITDEEVEAATYAHGSKDMPERNIVEDIKFAQEIINKNRNGLEVVKALAQGGFTDVAQDMLNIQKAKLTGDYLHTSAIIVGDGQVLSAVNDVNDYAGPATGYRLQGERWEEIKNIPGALDPNEID

>AGF18_15675
MEINEKLLRQIIEEVLSEMKGSDKPVSFTAPAASAAPQATPPAGDGFLTEVGEARQGTQQDEVIIAVGPAFGLAQTVNIVGIPHKSILREVIAGIEEEGIKARVIRCFKSSDVAFVAVEGNRLSGSGISIGIQSKGTTVIHQQGLPPLSNLELFPQAPLLTLETYRQIGKNAARYAKRESPQPVPTLNDQMARPKYQAKSAILHIKETKYVVTGKNPQELRVAL

>AGF18_15680
MNTDAIESMVRDVLSRMNSLQGEAPTAAPAADGASRSAKVSDYPLANKHPEWVKTATNKTLDDFTLENVLSNKVTAQDMRITPETLRLQASIARDAGRDRLAMNFERAAELTAVPDDRILEIYNALRPYRSTKEELLAIADDLESRYQAKICAAFVREAATLYVERKKLKGDD

>AGF18_15685
MRYIAGIDIGNSSTEVALATLNEAGTLTITHSALAETTGIKGTLRNVFGIQEALALVARGAGIAVSDISLIRINEATPVIGDVAMETITETIITESTMIGHNPKTPGGAGLGVGITITPQELLTRPADAPYILVVSSAFDFADIASVINASLRAGYQITGVILQRDDGVLVSNRLEKPLPIVDEVLYIDRIPLGMLAAIEVAVPGKVIETLSNPYGIATVFNLNAEETKNIVPMARALIGNRSAVVVKTPSGDVKARAIPAGNLELLAQGRSVRVDVAAGAEAIMKAVDGCGKLDNVTGESGTNIGGMLEHVRQTMAELTNKPSSEIFIQDLLAVDTSVPVSVTGGLAGEFSLEQAVGIASMVKSDRLQMAMIAREIEQKLNIDVQIGGAEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGEIIATHLAGAGDMVTMIIARELGLEDRYLAEEIKKYPLAKVESLFHLRHEDGSVQFFSTPLPPAVFARVCVVKPDELVPLPGDLALEKVRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRLVAGRGNIRGSEGPRNAVATGLILSWHKEFAHGQ

>AGF18_15690
MDSNHSAPAIVIAAIDGCDGLWREVLLGIEEEGIPFLLQHHPAGDVVDSAWQAARSSPLLVGIACDRHTLVVHYKNLPASAPLFTLMHHQDSQAQRNTGNNAARLVKGIPFRDLNS

>AGF18_15695
MNNALGLVETKGLVGAIEAADAMVKSANVQLVGYEKIGSGLVTVMVRGDVGAVKAAVDAGSAAASVVGEVKSCHVIPRPHSDVEAILPKSA

>AGF18_15700
MKQSLGLLEVCGLALAISCADIMAKSASITLVALEKTNGSGWTVIKITGDVASVQAAITTGAQFAEQRNGLVAHKVIARPGEGILPAEAPPPSVMEPEPEESETANVVSEAPAEEPLQQQGVVSCNLCLDPKCPRQKGEPRTLCIHPGKRGEA

>AGF18_15705
MDKQLLESTVSKVLDEMRLRPIPLGVSNRHIHLSASDYERLFPGHPISEKKALLQPGQYAAEQTVTLVGPKGQLKNVRLLGPLRSVSQVEISRTDARTLGVAAPLRMSGDLKGTPGIRLVSPYGELTLSSGVIVAQRHIHMSPLDALILRVSHGDRVSVAIEGDERGVIFNNVAIRVSPDMRLEMHIDTDEANAAGADNPQAFARLVGPR

>AGF18_15710
MNSEVLQRIVEEIVSRLQRRAHSTATLSVAQLRDADCPGLFSQHASLRILLVDLPLLGQLTEAETDDPAARKIHDALAFGIRVQLTLHSQLLPVIPVKKLARLPTIFTDERGLPLILHAGSVLSYRDVAQLGQGRLVIHRKCIVTALAREAAQARHIQLIKQE

>AGF18_15715
MHLARVTGAVVSTQKSPSLIGKKLLLVRRVSADGELPASPTSGDEVAVDSVGAGIGELVLLSGGSSARHVFSGPNEAIDLAVVGIVDTLSR

>AGF18_15720
MAIYTRTGDAGTTSLFTGQRVSKTHPRVEAYGTLDELNAALSLCACAAADENHRALLEAIQQQLFWFSAELASDSERPSPKQRYISSEEISALEAAIDRAMARVEPLHSFILPGRCEAASRLHFARTLARRAERRLVELAAEVNVRQVLMRYINRLSDCLYALARAEDSDAHQNNIIREVSRRYLAATLPSRSKEKTPLDLSFHDLHQLTRAAVERAQQLQVPVVISIVDAHGTETVTWRMPDALLVSSELAPKKAWTAVAMKTATHELSEAVQPGAALYGLETHLQGKVVTFGGGYALWRDGSLIGGLGISGGSVEQDMDIAQTAIAAINVGTHQ

>AGF18_15725
MNTSELETLIRTILSEQLTPAQTPNPAQGKGIFQSVSEAIDAAHQAFLRYQQCPLKTRSAIISAMRQELTPHLAALAEESANETGMGNKEDKFLKNKAALDNTPGVEDLTTTALTGDGGMVLFEYSPFGVIGSVAPSTNPTETIINNSISMLAAGNSVYFSPHPGAKKVSLKLISMIEEIVFRCCGIRNLVVTVAEPTFEATQQMMAHPRIAVLAITGGPGIVAMGMKSGKKVIGAGAGNPPCIVDETADLVKAAEDIINGASFDYNLPCIAEKSLIVVESVAERLVQQMQTFGALLLSPADTDKLRAACLPEGQANKKLVGKSPSAMLEAAGIAVPAKAPRLLIALVNADDPWVTSEQLMPMLPIVKVSDFDSALALALKVEEGLHHTAIMHSQNVSRLNLAARTLQTSIFVKNGPSYAGIGVGGEGFTTFTIATPTGEGTTSARTFARSRRCVLTNGFSIR

>AGF18_15730
MKTFSLQTRLYSGQGSLAVLKRFTNKHIWIICDGFLARSPLLETLRQALPADNRISVFSEITPDPTIHTVVQGIAQMQALQPQVVIGFGGGSAMDAAKAIVWFSQQSGISIETCVAIPTTSGTGSEVTSACVISDPDKGIKYPLFNNALYPDMAILDPELVVSVPPQITANTGMDVLTHALEAWVSPHASDFTDALAEKAAKLVFQYLPTAVEKGDCVATRGKMHNASTLAGMAFSQAGLGLNHAIAHQLGGQFHLPHGLANALLLTAVIRFNAGHPRAGKRYARLAKACGFCPADASDSTAINALIQQIERLKQRCALPSLAVALKEGRAEYSARIPAMVQAALADVTLRTNPRPASAGEIQELLEELL

>AGF18_15735
MSTAVNAVEMARSAEEIRERVRAAGVVGAGGAGFPAHVKLQAQVEIFLVNAAECEPMLKVDQQLMWQQAARLVRGVQYAMTATGAREGVIALKEKYRRAIDALTPLLPAGIRLHILPDVYPAGDEVLTIWLATGRRVAPAALPASVGVVVNNVQTVLNIARAVEQQFPVTRRTLTVNGAVARPLTVTVPIGMSLREVLALAGGATVDDPGFINGGPMMGGLMTALDSPVTKTTGGLLVLPKSHPLIQRRMQDERTVLSVARTVCEQCRLCTDLCPRHLIGHELSPHLLVRAVNFHQAATPQLLLSALTCSECNVCESVACPVGISPMRINRMLKRELRAQNQRYEGPLYPADEMAKYRLVPVKRLIAKLGLSPWYQEAPLVEDEPAVETVTLQLRQHIGASAVANVAVGERVTRGQCVADIPAGALGAPVHASIDGVVAAISEQAITVVRG

>AGF18_15740
MSQAIGILELTSIAKGMELGDAMLKSANVNLLVSKTICPGKFLLMLGGDIGAIQQAIETGTSQAGEMLVDSLVLANIHPSVLPAISGLNSVDKRQAVGIVETWSVAACISAADRAVKGSNVTLVRVHMAFGIGGKCYMVVAGDVSDVNNAVTVASESAGEKGLLVYRSVIPRPHEAMWRQMVEG

>AGF18_15745
MERQPTTDRMIQEYVPGKQVTLAHLIANPGKDLFKKLGLQDAVSAIGILTITPSEASIIACDIATKSGAVEIGFLDRFTGAVVLTGDVSAVEYALKQVTRTLGEMMQFTTCSITRT

>AGF18_15750
MKRLMLIGPSQCGKTSLTQGLRGEALHYKKTQAIEWSPMAIDTPGEYLENRCLYSALLTSACEADVIALVLNADAQWSPFSPGFTAPMNRPTIGLVTKADLADAQRISLIGEWLRQAGAQQIFITSALNNLGLDAVLDFLNSKEPLCLTK

>AGF18_15755
MSYKIMAINAGSSSLKFQLLEMPQGDMLCQGLIERIGMANAQVTLKTPAQKWQETAPVADHREAVTLLLEKLLDHRIIQSLQDIDGVGHRVAHGGERFKDSTPVTDETLAEIERLAELAPLHNPVNALGIKVFRQLLPDAPSVAVFDTAFHQTLDERAFIYPLPWRYYSELGIRRYGFHGTSHKYVSATLAEKLGVPLSALRVVCCHLGNGSSVCAIKGGRSVNTSMGFTPQSGVMMGTRSGDIDPSILPWLALHEGKTPEQLNQLLNNESGLLGVSGISHDYRDVEQAADSGNRQAALALSLFAERIRATIGSYIMQMGGLDALIFTGGIGENSARARSAICHNLNFLGLSVDEEKNQHNATFIQAENAMVKVAVINTNEELMIARDVMRLALPEAQTLTVSA

>AGF18_15760
MAVAQCPASCGELIQGWILGSEKLVSCPVDWYSTVEVDYGSPRADERPLARAMVDQLLSYWRYPPALSKEIRIDICSTIPVAKGMASSTADIAATAVAAAHHLGHPLDEPTLARLCVSLEPTDSTLFRQLTLFDHNTAATQIACDSQPQLDLLVLESPATLLTTDYHRLPRLEKLHAHSASLQLAWEKVQLACETDNPRRMGEAATLSAVASQHLLPKPGFDTLRGLVEECDLYGINVAHSGSVVGLMLDRQRHDIEYLQRRLEETRLSELWPRQHLLRMVQGGVELR

>AGF18_15765
MALLKSAHGGNIREAAALMGISGEQLLDFSANINPLGMPESLKRAILNNMDCAERYPDVEYQQLHLALAEHHHIPASSILAGNGETEAIFTLVQGLKPRQAMIVTPGFAEYRRALQSVECAVREFLLREEDGWQLTGAILDALTPDLDCLFLCTPNNPTGLLPDRRLLALIAERCQSLDIALILDEAFIDFIPDEPGFIPLLAHNPHVWVLRSLTKFYAIPGLRLGYLVNGDARAVARMRERQMPWSINAFAALAGEIILQDSAHQQKTWQWLAEEGQRFYHQLRHIPGLTVYPGQANYLFLRCDVADLDLQYAMLQQHILIRSCANYPGLDGRYFRVAIRSQQENTRLLTAFRRVFNE

>AGF18_15770
MSGYKSGLSRRRFLQGAGAMWLMSVSPVGLAAAAQVVAVRVWPSSTYTRVTVESNHILKYRQFALSNPERVVVDLEGVNLNSVLKGMGNQIRSDDPYIQSARVGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPSNATDVQDPLLALLEDYNKGDLQRQVPPAESGPKPGKAGRDRPIVIMLDPGHGGEDSGAVGKYRTREKDVVLQIARRLRALIEKEGNMKVYMTRNEDVFIPLKVRVAKAQKQRADLFVSIHADAFTSRQPSGSSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLKFGKAVLEKMGNINNLHKNQVEQAGFAVLKAPDIPSILVETAFISNIEEERKLKTAKFQQQVAESILAGIKAYFADGATLARRG

>AGF18_15775
MVKERRTELVEGFRHSVPYINAHRGKTFVIMLGGEAIEHDNFSSIVNDIGLLHSLGIRLVVVYGARPQIDANLAEHRHEPVYHKQTRVTDAKTLELVKQAAGMLQLEITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEEAIHRQLDNGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVYNQDGEIVPELFPNEAQARVEEMEADEDYSSGTVRFLRGAVKACRSGVRRCHLISYQENGTLLQELFSRDGIGTQIVMESAEQIRRATINDIGGILELISPLEQQGILVRRSREQLEMEIDKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQMGLSKLFVLTTRSIHWFQERGFTPVDVDLLPESKKEMYNYQRRSKVLMADLA

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
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