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BMC type: GRM1A


Organism: Paenibacillus alvei TS-15. Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

     PAALTS15_09094 (fasta)
       PAALTS15_09099 (fasta)
         PAALTS15_09104 (fasta)
                PAALTS15_09109 (fasta)
                 PAALTS15_09114 (fasta)
                  PAALTS15_09119 (fasta)
                   PAALTS15_09124 (fasta)
                         PAALTS15_09129 (fasta)
                             PAALTS15_09134 (fasta) HMMreg00072_5_grm1 GRM1A (details)
                                    PAALTS15_09139 (fasta) HMM10114PocR_2_grm GRM1A (details)
                                     PAALTS15_09144 (fasta) H_fuchsia GRM1A (details)
                                      PAALTS15_09149 (fasta) H_fuchsia GRM1A (details)
                                          PAALTS15_09154 (fasta) HMMptac_3_eut2 GRM1A (details)
                                                   PAALTS15_09159 (fasta) HMMalddh_2_egra EUT2D (details)
                                                        PAALTS15_09164 (fasta) H_bubblegum GRM1A (details)
                                                            PAALTS15_09169 (fasta) HMM06249EutQ_3_grm1 GRM1A (details)
                                                             PAALTS15_09174 (fasta) P_paleCyan GRM1A (details)
                                                               PAALTS15_09179 (fasta) Hp_grpu_fadedOrange GRM1A (details)
                                                                    PAALTS15_09184 (fasta) HMM06723EutJMreB_1_grm GRM1A (details)
                                                                        PAALTS15_09189 (fasta) HMM01923cobtr_3_eut2 GRM1A (details)
                                                                          PAALTS15_09194 (fasta) HMM10662PduV_1_mix GRM1A (details)
                                                                            PAALTS15_09199 (fasta) Hp_euts_oldRose GRM1A (details)
                                                                                PAALTS15_09204 (fasta) HMMgreae_1_grms GRM1A (details)
                                                                                                PAALTS15_09209 (fasta) HMMgre_1_grms GRM1B (details)
                                                                                                       PAALTS15_09214 (fasta) HMM00465alcdh_3_mix GRM1A (details)
                                                                                                        PAALTS15_09219 (fasta) H_periwinkleBlue GRM1A (details)
                                                                                                         PAALTS15_09224 (fasta) H_sky GRM1A (details)
                                                                                                               PAALTS15_09229 (fasta)
                                                                                                                 PAALTS15_09234 (fasta)
                                                                                                                   PAALTS15_09239 (fasta)
                                                                                                                                  PAALTS15_09244 (fasta)
                                                                                                                                      PAALTS15_09249 (fasta)
                                                                                                                                          PAALTS15_09254 (fasta)
                                                                                                                                              PAALTS15_09259 (fasta)
                                                                                                                                                  PAALTS15_09264 (fasta)
                                                                                                                                                      PAALTS15_09269 (fasta) HMMreg00072_2_pdugrm EUT2E (details)
                                                                                                                                                       PAALTS15_09274 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_periwinkleBlue
       H_bubblegum
      2x H_fuchsia
       H_sky

BMC-Hp(map on tree)

       Hp_grpu_fadedOrange
       Hp_euts_oldRose

BMC-P(map on tree)

       P_paleCyan

(complete list of loci)

Protein sequences:

>PAALTS15_09094
MEADLKQSSPNYLDDAEVKRLIALSQTGDSLARETLVNCNIRLVWSVVQRFMNRGYDPDDLFQIGCIGLLKSVDKFDLSYDVKFSTYAVPMIIGEIQRFLRDDGTLKVSRSLKEMANKVRKTKDELSKRLNRLPTIKEVAAELGVSPEDVVFAQEANKPPTSIHETVFENDGDPITLMDQIADDTQDKWFDKLALNEAIEGLSEREQLIVYLRYYRDQTQSEVASRLGISQVQVSRLEKKILQSIKAQIAL

>PAALTS15_09099
MSVQSDTNVMTLQFSSRSENEAFARVAVAAFVSQLDPTMDELTDMKTVISEAVTNCIIHGYDNDPTGMVTISAVISGEEIMLTVSDNGRGIEDLELARQPLYTSKPDMERSGMGFTIMENFMDECEVTTELGVGTSIRMKKRIESKKALYN

>PAALTS15_09104
MNLQVELEHQRNVLITRLRGELDHHTSEYVRIQLDEAIQRKQVNHVVLSLRDLTFMDSSGLGVILGRYKQIKGRGGKMAVCDMNPAVRRLFELSGLFKIVHVYDNERKALNGLEVVS

>PAALTS15_09109
MNKWLCASLSFLFAAACILPSSANASYARADLPPWTNSETPSQATSSAAPEAQLADNARSAVLMDADTGTVIFEKNSHDKLPPASITKIMTMLLVMEAIDKGKLKMTDKVATSEYAASMGGSQIFLEPGEEMTVEEMMKGIAMASGNDASVAMAEKIGGSEKAFVQMMNDKAAELGMKDTHFVNCNGLPAENHYTSAHDIALMSQALLKYPSVTKFTGAYEDYLRQNTNKKFWLVNTNKLVRFYQGADGLKTGFTSEARYCLSATAKRENMRVIAVVLGEPNTKTRNAEVTQMFDYAFAQYTNVPLLKSGDKIGDIRVEKGMVENIELKAQRPYHVLLKKGEGTDNLRFELEGPKSVKAPVAAGQSLGKLVVYQGDRKVREYPVESAEEIAKAGWWTLFKRTCGKLFFVN

>PAALTS15_09114
MSRCLKNLGKEIIAYENEMQNITREDDIMLQSQFEHKMISRRLNFPDFDFTKDNLDRICIRLHLGYSEEQLMVTVRLTVRYERAWSSYICGRTAS

>PAALTS15_09119
MGWYALFVETGSEDIVQKCLKLQFCQKDLYACVPKRLVPEKKDGR

>PAALTS15_09124
MPLLPIRSRVLLFMSTVQQANIDHAMDALKSEYGGERQFTRANFLDHMLSLQANGLIDEVHYELDDNGELCMYYAINDEGIHTINKYLPKKWTQK

>PAALTS15_09129
MAALLYNEDTSTKTNLLNRGVWMMKETVAAPAATAGMLKQKMNSRFRRNGIAYGLISGLTFGLYSTVVALAMMKEPFLGVVGAFAAPIVASAINDALAAIWLLIWNFKNGMIKEIGRSLVTIPGLMVAIAAVFGGPIANGAYLVGIDMAGAAAIPISALCPMFGAIFARMFLKQRIDKRVAVGMFICVIGAALISYVKPEGGVDNFTLGIIFALVAALGWGLEGVFATFGMSMLDSNIAITIREGVSGLVYIAVLIPIFSATDLFTSVLGSVSPMLIIAAAALFTAISFLTWYMANSMVGVAVGMSLNITYVLWGVVFAAIFLGSSLTPTIIAGAVIITLGALLVSMNPMDLFKKKEA

>PAALTS15_09134
MSVVMFVEDEPIEQEFLQSIAQEILGAEDKLLICDTGMQAIKLAKQYRPNIIFMDIMLPEMDGISSLQEIRRFLPDACVTILSASSDFSYAQAAISLQVHEYLLKPVKPDKLRQLIRKGLEKAAQSEEDGVTETYQIESAQECQRFIQEAVDYIQQNYKDKLTLQMVASHVYMNAQYFSRIFKRELGVTYTDYVNKLKIAHACKLLETTGYPAYRISTECGFTDPSYFNRVFYKQMNMTPKEYKKSVLARV

>PAALTS15_09139
MLKTNSPIATKVYARYSGILSLSKFSLLLHDNNGDVLLEFNPSPDFCRHICWENPTRPCADYLKRFNTGEQGRFVCCYGMENILLPIMVKDEVVGFISGMQAYSQEREFQKYLINTAELAEMKGLDLEFVAKAISAFPTIDKDKADIHEQLCHHIARNIAFDIAESAQDNTGIINRLSAEKEILEKKVIDLEAKNMSLVINPHFLFNTLNSIARIAYFEHSHTTEELIYCLSDLLRYNVKQDDQLHTIASELDNIEKYLYIQKARFKNRLHYEIIVPDELKAYRIPNLVIQPIVENAVIHGITPKRDGGTVRLIAEKYRNDITISVIDNGNGFSPEVLKLIHQPDSKVGVGFRSTDSRLKRYFGEKYGLSIVKSDYSGSTVNIRIPTQPIAR

>PAALTS15_09144
MKSEALGLIETKGLVGSIEAADAMVKAANVTLIGKEMVGGGLVTVMVRGDVGAVKAATDAGAAAAQRVGELISVHVIPRPHSEVENILPAAKQ

>PAALTS15_09149
MRSEALGLVETKGLVGSIEAADAMVKAANVTLIGKEMAGGGLVTVMVRGDVGAVKAATDAGAAAAKNVGELVSVHVIPRPHSEVENILPSTKA

>PAALTS15_09154
MGNYDQVLSLLMEVVSGAGKAGEEPSCIPLGISNRHVHLSQADVETLFGSGYTLSKLRDLSQPGQYACNETVTVCGPKGAIEKVRVLGPVRKQSQVEIMRGDCFKLGVKAPVRLSGELEGTPGVTLIGSKGSVYITCGLMVAQRHIHMTPDDALFFGVTDGEMVSIQFDGLRGGGYNQVAIRVGNDAALDCHIDVEEANAMDLTSASIVQIIKNR

>PAALTS15_09159
MENYDYDLQSIQETRDLARAGKAAADILAGYDAEQIDRIVQNMVLTAEVNAAELAALAVEETGFGKIEDKIFKNRLASTELYESIRDTKTIGVIREDKANQLIEIAEPVGLLMGIIPSTNPTSTTIFKSIIAIKARNGIVFSPHPSAKKSIMRAAELMHAAAIEAGAPKGIIGCVTKPSMPATQELMKCDEIAMIIATGGSAMVKSAYSAGKPALGVGPGNVPAYIERTADIPKAVANIIASKTFDYGTICASEQAVIVEECIRSQVIAEFERQGGYFMNQEQTAKVAAKLFVKGHAMNSRLVGRSPQVIAEAAGIQIPAGVKVLLGEQQGVGEKFPLSYEKLTTVLAFYTVQDWREACDLSVGLLRNGGIGHSFSIHTENHDMVMEFAQKPVFRILVNTGSTQGGVGASTGLAPAFTLGCGTWGGSATSDNVGPQHLINIKRVAYGIKDCTAQSPYSAPSSQQPKQQEDAMLLNLVDELMSILQKSGDS

>PAALTS15_09164
MQALGLIETRGLLPAIECLDIMLKSAQVELIEKCNVGGGLVTIAVTGDVGAVQASVEAGASAAQQLGSDMLISRHVIPRPHNDIASIIGQRSILNIAKEKDEPAQPVRHTQPLEQFPKQLPEQTLEQTPKRYAASDVPLDEAPNVPLDTAPKVPLEAAPDVSINNGGAEGFPVLAADPAQVLVSKDVSPETDNEDPVDGEHAVLDSPFKHQIDVLVKESGLDKAMELLETMTAMKLRGLARECGPAYGMSMTTISKADKVKLLKRFRHYYQQ

>PAALTS15_09169
MKKLICAADVEEWVASGQKRCCIDRNTIVTPAAHDKARELGLEFTDEPCGSLSSESAGCATQDDLDMNAIFKFFKMLSEKGLVEKLLGTALEPPYQAETDPTGLKLVRGRTVKMEAYDTGTNGAKVYRQEVIGKPDCTMSAGFMTVDHGCFEQETAQEETYIVMEGALDVTLNERTFTAHEGDVLFIPKGVKATKGSSDCTRMFYMTYPAGDPDRKLQ

>PAALTS15_09174
MIAAELIHNIWSTRKADSLVGMKLMLAEVIGGSDDGRRLIVVDTIGAGIGDRVIVCTGSSARKMLHTDDVPVDAVVVGIIDADCVFE

>PAALTS15_09179
MEFRIIKSPSKGTLDILLRRRGAPSSREVPQCDAVGLVQGRLIDMVWAADVAEKVVGVTVEDIRGSCPQNMILLAIFGDTASVEDAIAEIKQRSGKAGRKECHDCG

>PAALTS15_09184
MPETKPFAYCDQLVKQFEAVIQKPIPGRSSFYYTGVDLGTACVVLTVLDDSRKPVAGAYRYADVVRDGMVVDYLGAIQIVRELKAQLEQQLGAELEYAASAIPPGTDLLDAGAIKHVIQGAGFEVTALLDEPTAANAVLQISDGAIVDIGGGTTGISILKDGKVVYVADEATGGTHFSLVVAGAYQMSFSEADCFKRDPAHHQELLPLLRPVIDKVSSIINRHVVGYEVNELYLVGGTCCLSGMETIIEQKTGIATYKPSNPLFVTPLGIALNCTQEAM

>PAALTS15_09189
MKFITEMELRNVYRIEPFTSYMVEYGSRLTPEARQFLTDRQIAVTYGTQEQNQEQKQEPMPNSEQQAEKPDWRRGKLRCQMQSVSALFLLTGQELLEQDVLLAQKVLELSRLFSALQKGERGGTSTADLSFQGCTGITADVLFEDAGDCFEVTDFHIQLERGREIALLHRLRSALRELGFAVLEAAEGSSHEKPEEPVIPGINYMINTLSSFICRTTGGGTCQRQNPLHTAINS

>PAALTS15_09194
MKKRIMLIGPTDCGKTTLAHALDGTDRPLRRTQDIIYGPKTIDTPGAYIENTWMYSHLIATAQNASHILILVDQSRHLEVYSPGFASSFTKPVVGIITKADLALENEHYCVKVLQRAGITEPFFRISLPVGRGIGELKRYLFG

>PAALTS15_09199
MQQPDGPDLGRIIQESVPGKQVTLAHIIASPVPDMYERLGIDEAGTIGILTLSPSETSIIAADIATKVADVKIGFLDRFTGSVLLTGDVASVETALRAIIKTLSGSLGFATAEITRT

>PAALTS15_09204
MDTSGSQEPSKPQHVVDRKIECTGCRECEKVCPARALSIVGMNMTVSEIVEIVEQDMLFYTTSGGGVTLGGGEVCAQSEFAVHLLKECKRSGIHTAIETSGHTKPEAILAMAEYTDLILYDLKHMDSDRHYQLTGVRNERILENLRELINRKHNVKVRMPLMKGLNDDEDTIRKTVEFLLPYQENENFKGIDLLPYHKLGINKYRQLDMVYSVERDLSLNEADLERIERQISQYDFPVRVIKH

>PAALTS15_09209
MDIHEFSSKFAKATKAMAPQEREAIMKLFQGISKELSDKGAQPQLEQGLGQLRKEECAYPEGMTERLRALKEHYLTIRPSITTYRAKAFTQVYKENPGLPEIMLRAKAFRRACEEAPLLIQDNELIVGHPCGAPRAGAFSPDIAWRWTRDELDTIHNRPQDPFYISEEDKRIMQEELFPFWEGKSVDEICEQQYRDAGLWEFSGEAFVSDLSYHQINGGGDSNPGYDVILMKKGMLDIQREAKEHLAKLSMQNPEDIDKIYYYKSVLDTTEGVMAYAKRMSEYAYQLAAKETNPKRKAELQKIGEINARVPAHAPTTFHEAVQSVWTVESLLVVEENQTGMSVGRVDQYMYPFYEADRKAGRLTEFEAFEIAGCFLIKCSEMMWVSSAGGSKFFAGYQPFVNMCVGGQKREGGDATNDLTYLLMDAVRHVGVYQPSLACRIHNSSPQKYLKKIVDVVRAGLGFPACHFDDSHIKMMLMKGCSIEDARDYCLMGCVEPQKSGRLYQWTSTGYTQWPIAIEFVLNRGKMLWHGSNPGLDMGDLSNFKTYEEFEAAVKKQVEYITELSAVGTVISQRVHRDYAPKPLMSIMYEGTMESGRDVSAGGAMYNWGPGLIWSGLATYADSMAAIKKLVYDDKKYSLEQIRDALLADFEGYEQIHKDCLDAPKFGNDDDYADRIASDITGWTENYHRNFKTLYSTFSHGTLSISNNTPFGEMTGATANGRKAWLPLSDGISPTQGHDKKGPTAIIKSVSKIDVEAMNIGMVHNFKLLRGLLETPEGENGLINLLRTASILGNGQMQFSYVDNETLIKAQQNPDQYRDLIIRVAGYSAYFVELCKEVQDEIISRTMIEHF

>PAALTS15_09214
MINDIFVIKSKVYAGEQSLKKLAEIQGTKACIVSDQMMEKLGYLGQVVDLLQSGGISTSVYTGVKPDPDVSIVAEALHVYWESGADVLLALGGGSVIDTAKGVLYFARQYAQEKDTTFVKPSFVAIPSTSGTGSEVTDFSVITADGDKIVIVDDFIAPDLAILDSTLTKQLPNKIVVDTGMDVLTHALEAYVSTKATDFTDALAEKAIQLVFAHLETLYHDPADAEARDRVQNASCMAGMAFTNAGLGIIHSMSHAFGGTFHIAHGRVNSLLLEAVMEYNANLGGKVIDRVCERYARLASLLHLPARTSREGTVSLIQAIGKLKRSIGIENGIRELGVDQDAFDEALSRMARTAMADRCTPTNPRQPTEEELEHLYHKSF

>PAALTS15_09219
MSKHDALGFIETFGIVFIMEAADAMCKAANVDLIGYENVASGYISVLVRGDVGAVRAAVDAGVAAVQAMGTEVYSSNVIPNPHPDIEKIIARYALPA

>PAALTS15_09224
MEYRGEEALGLVETLGMVPAIQAADAMLKAADVVLVSYENVGSTLVTIMVKGDVAAVRSAVEAGAEAAAKIGKVTAYNVMPRPLSSIAGIVKAHAINA

>PAALTS15_09229
MKPLNDFLSKQMNMEDLVQQKLRLFFEDKSIVFDKSRFAGGLTNYNYIMNIHGTEYVIRKPGNLTDQMIDRRIERVNNGIASEFGVNSECIYFDEESGIKISKYIPDSTTLAAAGPLALPSLQSVSSLLKKIHGSPKHFLNKFDWLSELAKYETIVAQLNGELFFDYASLKEQLLRFMQDHLKNVISVPCHNDTVPENFLADRNGSVYLIDWEYSGMNDPAFDIAAYIIESRLTAEAIDQLFEAYYGNTFTEDDLMKVKCYMMAQDLLWTVWALLRHYTGDDYLDYCSLRYNRLRRNIQVLSMQPDYPTADMVMP

>PAALTS15_09234
MKKRKPTGQPAHIAEHLLKRYAKSAHMMLHSDQGSVYTSQVYQEAIKAKGITMSMSRKGTPADNAPIESFHSTLKSETFYLEKITCTTTAIVEQIVRDYITYYNLIRIQTKLNNQSPVNFRRLAA

>PAALTS15_09239
MATRVSYPVEVKLKAIEMRLAGIPVKEVMNELSIKNVTQLKVWMKWYREGELHHLEQPVGKQYSFGKGPEYTSELEKVKAEYLFLKQQLDVLKKYKELERRCHLK

>PAALTS15_09244
MKKIAALLLSSSLFLTMLPATALAQEAKPNVTRAEVVEFLLNAADDYNPGIKKEDILKGYSKGDAKEDQEVSRIEVLIMLSRAFSNLPAPKGNDLRVANTSASFTDVPKWAQDEISKLIASGVLTDYPDGKLGVSDHITKEQLLTLTKRVMALEGSNPRDDYYEYVNKKWLNDSKIPAGEMSNGVFNELAKANEDRTKAIIDELVKKQNPAGSKEQKIADFYKSVLDMESRNKQGIKPIAPYLADLDKASSVKELFDTSMKMENEISKGGLLSFAVMGDAKDSNVNALYFSGLGTRLDKNSYVSGDEKTKKVYTNYLTQLFVLSGTDEIAAKAQAEDVYAFEKELAASSMDLQDQGKVENYYNPYTKDKFITLFKSIDMSKYMKELQVDKADKVIVTDVGLLNKSAEVLNEKNLDKIKSYAKATLLMNAGGTLSGDFLKLATEFEAQLFGIEGEKTNEEMAVMTTQTVMSQYLSQEFAEKYFTKEAKQDVEQMVKQFIEVYKERIKALDWMSEATKAKAIKKLDKMTIKIGYPDQWNDYLKDASIKTFAEGGSLFDNIVVINKALKKQAFASLGKPVDKSSWMMSTYEVNAYYNPLNNEIVFPAGILQAPFYDIKAKRETNLGAIGMVIAHEISHAFDNLGSAYDENGNAVNWWTPEDFKKFQEKCDQVISYYDHVEVLPGVYNNGKLTVSENIADLGGMAASLQVLSKMENPDFKGYFEGYATIWRMTMSKETVAYLSTVDTHSANKVRVNRTVSNFPEFYKAYQVNEKDAMYVAPKDRVSIW

>PAALTS15_09249
MSVSSGRKITQILGAELDKLVTLPLIWLTLIGTYILNLVLAAAFTSVGLQEAAGTQSILNIGFASMGFLQAGFIILGTLATCSEYTGGQIRTTLSTIPRRGFQLCAKHLALAIITIPAAFLIAASGVLYTFIRMRDIAVGFEIHTMIEALLGVTGYLTLTTLLSAAIGALVRQTTPALVVLLGYYFVVSPLSRDFLPRFKQYFPDTAGYYMYMPPSSDEINVLTPMQGTGISMLWTLIFITVAIVFYRKRDA

>PAALTS15_09254
MRVFNAELSKLFSLPGIWLAFLIGAFAPSVIAAFDSIVEKEEIIAGVSTRLSEIGYSGLGFGVQGVIILGVLAVSSEYLTESSESGGGQQITTSLTVVSSRLHFLLAKAGAVTVVSILLCMVAMMTTVSATHLILGEYAPAFEWSRLIGVVCYWTFTALLALGITLLTKNGIIPLVVLMINSSVVSFSVLLSKVTKLAFYLPDRAGLEMFMFMSNRFLTPFTGGLVMFDWVAVFFIIAAIVFHRRDVAA

>PAALTS15_09259
MLTIHNLVKRRGTGEILSGISFKARPGSVTGFLDPNGAGKSSTLRILLGLDRATSGSALINGKPFAELHNPLTTVGAALDGFGAHRMRTGRAHLCWIARAAGLSRSRVEEVLEIVGLTNAAGKRVGSYSLGMGRRLGMAAALLGDPKILVLDEPVNGLDPQGIRWIRTFLRERAASGNTVLLSSHLMGELAETVDDVVIINHGKIVADGTLVEVIGNHSTLEEAFFALTSEHAGDVV

>PAALTS15_09264
MIQQLEDSRERAYEEELLRHRLIVNLSHDLRTPLTILRGHVTKLNKESMSLEGQNSLTEINHTITRVGDLMDDLLTYTLLTSGKHPFGPVSTDIGRLVRASVAAWYPVFEEKEIQLDVDLPADETFYWEADPTWMTRVLDNLFQNIIRHAAEGKYANIVVDLETEQIIVADRGPGMDNSSYERGAGIGLSTSNYMLKKMKLKADFTSNENGTRVAIGRA

>PAALTS15_09269
MKRNVLYIEDNEKIGSWVKEELEQRGFSVQWLLSGEGAEREVNQHEVIILDIMLPGLDGFTVGKRLKKAAPAVPILLLSARTSIDDKVDGLQFADDYVTKPFHTDELVARLEVLIRRRGGTQSERISLGDHIEVDPEVQMVYDKRTGEEIILTGKQHQILMYFLRHPNQVLPKEKIYEAIWQETYITGDKTIMVHIHRLRQKLERHPDSPEIIETLKGIGYRVKL

>PAALTS15_09274
MPDAVAMGVVLWDDIVLEDKLCYCYVCTTEEATYGQVILNDGSKSAISDGFGSNPPNATVCKTIDNQLFKKRLLELLVS

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021