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BMC type: GRM1A


Organism: Desulfotomaculum aquiferis. Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

      N752_11985 (fasta)
       N752_11990 (fasta)
         N752_11995 (fasta)
             N752_12000 (fasta) HMMreg13556_3_MIC1 FRAG7 (details)
               N752_12005 (fasta) HMMreg13545_1_CsomeBCy BUF3 (details)
                N752_12010 (fasta)
                  N752_12015 (fasta)
                         N752_12020 (fasta)
                            N752_12025 (fasta)
                             N752_12030 (fasta)
                                  N752_12035 (fasta)
                                     N752_12040 (fasta)
                                          N752_12045 (fasta)
                                            N752_12050 (fasta) H_sky GRM1A (details)
                                             N752_12055 (fasta) HMMalddh_2_egra GRM1B (details)
                                              N752_12060 (fasta) HMMalddh_2_egra GRM1B (details)
                                                N752_12065 (fasta) HMMalddh_2_egra GRM1B (details)
                                                   N752_12070 (fasta) HMMalddh_2_egra GRM6 (details)
                                                        N752_12075 (fasta) HMM00465alcdh_3_mix GRM1A (details)
                                                         N752_12080 (fasta) HMM00465alcdh_3_mix GRM1A (details)
                                                               N752_12085 (fasta)
                                                                N752_12090 (fasta)
                                                                     N752_12095 (fasta) HMMgreae_1_grms GRM1A (details)
                                                                       N752_12100 (fasta) Hp_euts_oldRose GRM1A (details)
                                                                          N752_12105 (fasta) HMM10662PduV_1_mix GRM1A (details)
                                                                             N752_12110 (fasta) HMM01923cobtr_3_eut2 GRM1A (details)
                                                                              N752_12115 (fasta) HMM01923cobtr_3_eut2 GRM1A (details)
                                                                                   N752_12120 (fasta) HMM06723EutJMreB_1_grm GRM1A (details)
                                                                                    N752_12125 (fasta) Hp_grpu_fadedOrange GRM1A (details)
                                                                                     N752_12130 (fasta) P_paleCyan GRM1A (details)
                                                                                        N752_12135 (fasta) HMMPduS_1_all GRM1A (details)
                                                                                         N752_12140 (fasta) HMMPduS_1_all GRM1A (details)
                                                                                            N752_12145 (fasta) HMMPduS_1_all GRM1A (details)
                                                                                                N752_12150 (fasta) HMM06249EutQ_3_grm1 GRM1A (details)
                                                                                                    N752_12155 (fasta) H_bubblegum GRM1A (details)
                                                                                                      N752_12160 (fasta) H_fuchsia GRM1A (details)
                                                                                                           N752_12165 (fasta) HMMreg00072_5_grm1 GRM1A (details)
                                                                                                                   N752_12170 (fasta) HMMreg00072_4_pdu1d PDU1F (details)
                                                                                                                      N752_12175 (fasta) HMMreg00072_2_pdugrm EUT2E (details)
                                                                                                                       N752_12180 (fasta)
                                                                                                                        N752_12185 (fasta)
                                                                                                                          N752_12190 (fasta)
                                                                                                                              N752_12195 (fasta)
                                                                                                                                      N752_12200 (fasta)
                                                                                                                                       N752_12205 (fasta)
                                                                                                                                         N752_12210 (fasta)
                                                                                                                                             N752_12215 (fasta)
                                                                                                                                                    N752_12220 (fasta)
                                                                                                                                                       N752_12225 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_sky
       H_bubblegum
       H_fuchsia

BMC-Hp(map on tree)

       Hp_grpu_fadedOrange
       Hp_euts_oldRose

BMC-P(map on tree)

       P_paleCyan

(complete list of loci)

Protein sequences:

>N752_11985
MTGKHRDKKVIILVLLVLVVGLIAGCGTGISNKAEHLYVSKGVLNLDEVRWENSPIIKLDGEWEFHWQKIISPAEFASKLEEPTHYLQVPGLWNNAVINGEKLPPEGYGTFRLVISSSNVQTGIALKMPAVYSAYKLWWNGELVSDNGEIGTSRELVRATREPGVISLPIQQNENQLLLQVANFEYYRGGINKSIYFGSKELLLKERNFTVIRDMFLAGAVFVTGLFYLGLYFCAKVRRLPFTLQSFVCSLYYVQY

>N752_11990
MFFVLRSVLINEVVISILITDFDWAIGNRLEAAFSYLGVPIIFVFFQNCSMA

>N752_11995
MALFVLTAPHKVYDNLLLIYFIPLVLSGIYVYCCIVKAALLKIQGAFPLSITGLIFLVSGINDILLNYGVVKTYNFFTYGLVLLIISKGYILLRGYVQAFAR

>N752_12000
MYMNIRALNDNLEKTVNDRTQELLAANEKLKCLSTLDGLTGIPNRRGFEEIMGQEKELAPQNSTHLAVIMLDIDFFKEFNDLYGHLNGDDCIKKVAQALYAYAIENGAFAARYGGEEFVLILQGKNQEAVAAFAEQLRQRIEGLCIPHSLSEVSKYVTISLGVCWVTDKNDTSIKKVLDEADKALYQAKQKGRNRICTVGLYPKTPDS

>N752_12005
MGEEAFFHKQPTSYNAIAMEFVEATIINYRRYWDVVSRPGIAHIILKSMSIKSRILATQIEDLAFRSTVEKVARLLYCLLAEGAADIKAKTENIGVTHNELASLACAHRYPLAMPYPN

>N752_12010
MVYNRNDYLSTSPWLKSQFLGGTPLNKEDIDFLTEIGAKKTYTKGAVLLDMGNRVITCSFCTMERFATPY

>N752_12015
MGIGAAANVLGLGKMLAEAVLPLMSSNGIYVTIGLVWLLCVVSNFLLTPLAIFAAFTVPLTEVALKLDINPMAFYYTIFHGCDQIIMPYEYALVLIFFSFG

>N752_12020
MPETMVDKTPTMLEASDKNKKQILLWAITITLPLVLMLVPINEVFTHQIRLFLAGTLFAILLFAFELLPQLIPSLLLPIFYVVSGVAPSTAVFGPWATTIPWMFLGGILLANTLDSIGLLRRIAYWCIIKTGGTYNGILYGIMFAGIILNILIPAQAVIPMAAFTYGICKALNLGKSKESAGIMLTGAFAALLPLFFFYNPNFAIIIGVASSVHSTPITWLQYFIQNVPNILWCFLMVFIISKVFKPDQTIDCKDYFSGEYGKLGALASGEKKAIFVTSLLVIFLITGGIHGIDIGWGFPLAAILLYLPGINIGTESDIKRINFSLLFLLLLAWVSVRQQTY

>N752_12025
MEIYPTEAGHLEPFHSHHFYSPFISSAQRLPNGNTFITEGSGGRLIEVTSDYEVVWEYISPYWGKEFKLNMVYRAYRLPYDWVPQLEKPQEVAIEPVDVTTFRMPGAAPLGCDDVTEVEGTLGYQRVDGFCVTTVDEEDANKDDDDGVIRI

>N752_12030
MIPKGLPGEGNILIFDNGAGQAMDYLVKPPPMAPRPAAGITPGY

>N752_12035
MGLPTIHPTGTTIYNPEKAFNGYTIFQAAELGAMLVNMNGKEVKLWKGLHGFPNKMLPGGFVLGHSGARDSRFGYQDNVDLVQVDWDGNVVWKFDQYEFIEDPGNEGRWMARQHHDYQREGNPVGYYVPGLDPKTDGGNTLILCHKNVYNKKISDKNLLDDTIIEVDWEGNIIWEWNCNEHFDEYGFSQAARNVLFRDPNMHDCGGGMGDWMHINSMSTLGPNKWYDQGDERFHPDNIIWDARETNITAIISKETGKVVWQLGQIFLPQKN

>N752_12040
MTYAVNFYFNKEAESYITDIWAALDKLGKGKCLICYNGRPHITLAIYRDLNLQAAKERLKLLARDVDPFKLTFLQIGIFPNNKGTIFLSPNLTDDLFQIHRNFHAMFKDHEDQSWDYYKPQSWYPHCTLSTETSEEAIPNVLEQLLKEFSPLEVTIKAIGIVSLDPIDYLFEIELGKNNASTLVE

>N752_12045
MRMEELVQEKLRYAFHDESIVFDKSRFAGGLTNYNYIMNIRGIDYVIRQPGGMTEQIIDRKMERVNNNIASEFGVNSDSIFFDQDSGIKISIYIKNSQNMAQAGPGSAINLESVSALMKKIHSFPKDFSNCFDWQIELSKYEQIIRQQGGSFFFDYTTLKDKLVSFVQNNIKSTILTPCHNDTVPENFIIDDTGRTYLIDWEYSGMNDPCWDVAAYILESKLSEEAINHLVQSYFGHPLTPVEEMKIRAL

>N752_12050
MKYFGEEALGLIETRGMVPAIYAADVMCKTADVVLVSYENMGSGLVTVMVKGDVAAVRAAVESGAAAAASIGELTASHVMPRPVSRVGRIVSKHDIDE

>N752_12055
MTEDMNRIDSDLLSVQEARILAENAREAQKILAAFPQEKLDKIVEHMAKTVVKYAKELAVLSHEETGFGKWEDKFIKNVFASDFI

>N752_12060
MKVVGIIGEDKEKETMDIGVPVGVIVALPPSTNPVSTTIYKTLLAIKSGNAIVFSPHPKAKKTIAKVLDILIRAAEQRGMPPGP

>N752_12065
MRTLAAEGTAALMNHKDTSLILITGVPKMVRAAYTSGKPTIYGGPGNGPAFIERSADIKKAVADIIVSRTFDNGIVSASEQSIVAEDCIADEVRQELRRNGGYFLSALESERLSKYFFRRDGSLNPEIVANLP

>N752_12070
MNACEKCIELLVNEGKGHTLVIHSKNEKVIKEFALKKPVSRVLVNTPATLGGIGATTNLFPALTLGCGAAGGGLTSDNISPMNLINIRKVGYGVRKLEDITSGVRAEAGTVAIGTGCSAKDVSIDSVQDLHELLEALLKQLNGEKI

>N752_12075
MVPDPDVKVIAAGMKRYLETQSDTIVALGGGSVIDAAKGIIYSLWQFKKAAGEEFKKPLFIAIPSTSGTGSEVTNFSVITAEGQKVCIVDEWMAPDIAILDSTCIQHVPRQVVADTGIDALVHAIEAYVSTEATHCTDALAEKAVQLIFENLRTLYNDVSDSDARERIQNASCIAGMAFTNASLGINHSLAHALGATFHISHGRANALLLSHVLEYNASLRGKGDRRAAEKYARLAVVLQLPARTCXKGR

>N752_12080
MQAVKELLQSLDIPSRIGQLGIDRDKFEREVGSMVELALQDRCTPTNPQQPSREDLMNIYHKAF

>N752_12085
MNTSANQRAILMKEKLNADFARKGVLTGLFSGCTWGLNSVLLGLALGLVPILGEEAAIYAIPLAAACMNDSLAGLWLLIYNGTAGRFQEIIRSLKTFPGIMVCIAALLGGPIANGGYLLGISLAGPAYALTITALYPIVGALLSRIFLKQHIVPRVWVGMVLSIIGAIVISYVPPEGGNSSVFYLGILFASLAAFGWGAEAVLAVYGMSMIDPKIAINIRELTSGIVLAIFVLPLVGGWAVVSKVITMPVAFGAFAVAALAAGVSYLAWYKANTTIGVAKGMALNGTYVMWGVIFSVLFLDQPLTQTLVIGSGLVLVGATLVAINPKEFFKKGGEA

>N752_12090
MAELLPLRFRILHYISTVDKACVEQIMKALEPEYGTEKQFKKAVFMDHLLDLKANFIIDDNDAVIDDKGELVIYYSINHEGRRLLNKYLPKGWRQK

>N752_12095
MQVVFKSRGLERKYQVMYKEELCVDCGSCISVCPVQIHYFQHGEDTQSEGSSRHKIYRSIDCVGCRKCEAACPKQALSVVGLDKTISEVLEIIQQDALFYLSSGGGVTLGGGEVTAQPEFATNLLMECQGMGIHTAIETSGYAKLESLLKIAQFTDLFLYDIKQIDPDLHYEYTGVRNERILENLTELIHRGFTVKVRMPLLRGLNDSKDIIGRTLEFLRPFKGYKNFQGIDLLPYHKLGINKYKQLDMKYAISEDLSFKEEELAKIEEFIKDYDVEVKVIRH

>N752_12100
MSVADEFDRKRIIQEYVPGKQVTLAHIIASPVQDIYERLGIEEKGAIGISTLTPCETAIIAADIATKASGVEIGFLDRFTGSLVISGDVASVEAAMIAINDTLEKLLGFTPAKITRT

>N752_12105
MIVGPTQSGKSTLANILNDTNRPLKKTQDVIYGQNTIDTPGSYIENPSMYRYLIATAQTAYLVLMLVDQARPIEVYPPGFAKTFTCPVIGVITKLDLAPENARLAIEQLNRMGIVEPYFQISLKDNTGVGALKDYLTRKKNPARVIEILHIYLVLQLIHANLPMGFPEG

>N752_12110
MELREIYKTNPFVTYVLAPDTKITPGARQFLVDRRVALVQAEPQLDEVVEAKPDQSSQLEQQESWSTLRLRGSMDRIEATFFLTALELLHYGDAVLSEEVMALGRYFRNVRKAELEKTAPSDIQFWGWTEEEIKNALRIWKNALTPANLIWEWKKEKNWPC

>N752_12115
MEKGKELALLNHLRASLGEVEPAILEAYWNEEKQSCSRQDLIKKVNLIISILCMMMWKCLGGEKWKR

>N752_12120
METLNPAFLYCDQLVRDFEKAVKTPILNKTSVYYTGVDLGTAYIVLAVLDENFQPVAGAYRLASVVKDGMVVDYIGAIRIVRELKQELEQRLGTELIYAAAALPPGTFSLDSGAIKHVVQGAGFEITNLLDEPTAANAVLKINDGAIVDIGGGTTGIAILREGKVIYVADEPTGGTHFSLVIAGAYKMSFEDADQYKRDAKNHRELIPVLQPVVEKVSSIISRQIADYQVKEIYLVGGTCCLKGIEDIIAKQTGLPTYKPQNPMFVTPLGIALNCTQEIL

>N752_12125
MVFASDIAEKAAGVVVEDIKGHCPQNLIMLAIFGDTASVEAAMAEIKYKLRAVKEGETL

>N752_12130
MIAAKVIDNIWATRKADSLRGLKFMLVEVLGGIDAGRLLIAADTIGAGFGERVLVCTGSSARKMLDRDDVPLMLSL

>N752_12135
MELLNQIKDAGIIGAGGAGFPTHAKLTAKAEYILLNGAECEPLLRVDQQLMELFPEEIIRGLEAAGRYIEAGKAIIGIKGKHKKVIALLKERIAALGLANYMEVMELRDIYPAGDEQVLVHELTKRIVPEASIPLKVGCVVINSETALNIYRAMLGSQLRKPT

>N752_12140
MTLKVPVGVPIREVIRQCGVDNVDDYAVIDGGPMMGRVMNSLDGYVTKKARAMYCLKRITF

>N752_12145
MCTDLCPRYLLGHHIEPHKMMRALSYNLEDVSELKIAQLCCECNACELYSCQANLHPKTVNVLYKQKLAEQGIRYQPTQIEFKPREAREYRLIPSKRLIAKIGLTSFDKPAPVTQLEFRPESISISLSQHIGAPAVPVVAVGQQVNAGQLIGKIPDNSLGAAVHASFPGTVTEVSDNSIVIKVGSYV

>N752_12150
MKKLVCVKEVEAAAEKGQKIFCVDCHTIITPAAKDLAKELGLEFSTDSSAAGNHTIKDCSLPKKDSQEKEIDPEMIYQVVKAVLGSRLLANIPGSSEEIPFRADCEPKSGLKIVRGRTVKQETFDTGDPNANVTYREVISKDDSKMSAGFLTIEKSSFDWELSYEEIDIILEGSLTITINGETYHAHQGDVLFVPKDSKVTWSSPDYVKLFYVTYPANC

>N752_12155
MQALGLIETRGLLPAIECADVMLKTAQVELLERTFVGSGLVTIVITGDVGAVKAAVEAGVTAVEKLSPLSLVSHHVIARPHQEMGSMVGTRPEPVPKETDKVREVQESHAAVSEPTVEDKTTKESTGPVQIMPSQLHKEGVDAFVQEFGLEKSIDILKTLSVVKLRNLAREYKGLGLAGRAISKANKELLIQELKRYYQRGSE

>N752_12160
MSKSEALGLIETKGLVGAIEAADAMVKAANVQLIGYEKVGGALVTVMVRGDVGAVKAATDAGAAAAQRVGELISVHVIPRPHSDVEMIYLQLKKKYYKK

>N752_12165
MSVVLIVEDELLELEFLKSIVSEELQPNDKLITCESGIQAVKLAKQYRPDVIVMDILIPEMDGLQALQEIKKFLPQAAVMILSACSDFSYAQTAIRLKVQEYLLKPIKPSVFKQAFQELLATVDTGKEETIAEEFTEPKNNQIYFIEKSIKYIHDNFKQKLPLQEVSSYLFLNPQYFSRIFKKEVGVSYIDYVNKLKIEHACKLLETTNYPAYRISSECGFTDPSYFNRVFVQQMNMTPKAYRRKHLSENMENV

>N752_12170
MIIKLRRKFILVNMALVSLVLLIVFGTIFISNYQRLQAESRDALHRVIEQGMDMPPPKPEIGRLPPGRKPFPITPVFSVFLDQNNTIVYTTQQNVSVSDDVLAKAVEKVLASDYPEGILHDLNLRFMRRDLIDGTKIAFADRTHEINSMQSLFLTSLVVGAGGLLAFFFISLFLSSLALRPAERAWEQQRQFVANASHELRMPLTVILANISILLANRQDPIRQQIKWVENTRLEALRMKMLVDDLLFLAKSDAAHVPLAFSDLNLSNIVWSCLLPFEPVAFEQGVTINANIEPDISLQGNESQIKQLIGILLDNACKYADEKGIVTVTLGREQKKVTLRINNTGTPISAEDLPHIFERFYRADKSRARELGGYGLGLAIAKSIVENHHAKITADSTENLGTTFTVNFSYNN

>N752_12175
MLTAKDEINDKVIGLDYGADDYMTKPFAPEELLARIRALSRRQGDVVLEEMTFADLTLNLSTYDLQRGEKSVHLGFKEFEVLKILMTNPKMVVPKEDLLTKVWGVDSPAEDNNVEAYISFLRKKFFFLGSKVNIGTIRKVGYRLEADEL

>N752_12180
MRVLIVEDEVRLADALGQIMAEQKYAMDIVYNGEDGLDYA

>N752_12185
MAQYQSVFKRYEKKYLMNEQQYQALKGFCKTGLSQMGHIPSVIFTSIHRIIA

>N752_12190
MTLREAELYLLQGKQPLTNCQILKEINWVLGFYKPIPKVYIAYERIAICGKENKDLRITFDTNIRWRESVLDLSKGAWGNTLLGEGHHLMEIKIPGAIPLWLSQRLTKLEIFPTSYSKYGNCYKNNLIHSTYRGGTYSA

>N752_12195
MLLCTVASLFLGLGVAYIYMYRSIYTKNFVVTLALLPAMVQIVIMLVNGNIGTGIAVMGAFSLVRFRSVPGSAREISSIFLAMAVGLATGMGYLGAAAMFLMIIGAMTILLATTGFGEQKKTEKELKITIHESLDYSGIFDDLFERYTKSAELIRVKTTNMGSLYELQYHIVLTNQSTEKELLDQIRCRNGNLNIACGRVPTYKVEL

>N752_12200
MHYRTGKLIPMLIAILFITLVIGCQTTSSAAIPSETMTVNEVAIIDPGYSNRDLEGTWDAETATSISLNGSSIAISGAGATASGGQLTISTAGVYVLSGTLDKGQIIVDAADSDKVQIVLNGVSITCPDSAPIYVKQADKVFLTLGEGTKNTITDGATYILADGEEEPDAAIFSKEDLTINGSGELIVKANYNNGITSKDDLIITGGDIIVNSARDGLRGRDMVAIYGGAFVINADGDGIKSNNDKDTDKGWVSIDGGTFEITAGNDGIQAETIAQITGGTITIKTGGGSAEASVARQNDMRPGWGKDQAEQTDASESTKGIKGKTAVYVTGGNINIDSKDDSLHSNGDICITAGTLILSAGDDGIHADASVVVNGGTIHITNSYEGVEGKTIVINGGEIHVTASDDGINAADGSTAPVFGGTTPEEF

>N752_12205
MINASGDGIDSNGSLYMDGGTVLVNGPTNNGNGPLDHDRMAEITGGTLVAAGSSGMARTSPTLPPRTHCW

>N752_12210
MSLMDESGKTILNFIPAKDYQSIVISTPELQQGKTYTLYSGGSLAGNSSDGLYIGASYSPGTEIVKVTISGTITSISDTGDQITSMGGPGGMGGPRRGTPPVTGTVPVTTPRPHSRS

>N752_12215
MPRVARILNDKQVYHIMLRGNNKESIFKNDADKERLIEVLKHKKELGEYFLYAYSIMDNHIHLVLKEGYDSLSRTMKRVGISYAQYFNKKYKRVGHVFQDRYKSENIDTESYLLAAIRYVHQNPVKAGIGKIDTYQWSSFKDFINNVDCLVEIDEVLGMFSEDKERGLSAFVAFNYQEQVEKFIDIEEDKELNGDNIQGYVDNYLKEKCISLKELKDGKIKI

>N752_12220
MSLENLYKIGLTDPFKQEATMYESLYLARVSVQHKHLYKVITEKGEIQAEVSGKLGFFAKDNTDYPVVGDWVMVDRMDDCGGYAIIRQILRRRSVFERKAAGTSQQSQIVAANIDTVFICMSLNNNYNLRRLERYLSIAWDSRATPVVVLTKSDLCDDIPTKLAEVYSVAIGVDILVTTSISDDGYTGVNKYLGKGQTVAFIGSSGVGKSTLINRIVGYEVLATKEIGGGDKGKHTTTYRQLLALPGGGVVIDTPGMRELQIERADLSKSFSDIEELSKNCRFNDCTHQTEPGCAVSEAISTGVLSVERYNSYKKLQAELKYQGLNSRQLEHEKINRMFGSMSGMKQAKSFFKEKNRRR

>N752_12225
MKNYVWKNNVFLVSAIIVMMLVLLGAVLPNRFGEIAGRLFRFTTYNFGWFYLISVFIIIIFLIALAISKYGTIRLGEEGEKPQFPFFTWIGMLFSAGFGVGLVFWGVAEPMSHFFTTPFSGTEPQTEAAARIAWGMLFFTGESANGLFSQ

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021