Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: GRM1A


Organism: Enterococcus avium (Streptococcus avium). Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

         EK398_22230 (fasta)
                        EK398_22235 (fasta) HMMreg12833_4_GRM5 GRM5 (details)
                         EK398_22240 (fasta) H_fuchsia GRM1A (details)
                             EK398_22245 (fasta) HMMptac_3_eut2 GRM1A (details)
                                      EK398_22250 (fasta) HMMalddh_2_egra GRM1A (details)
                                         EK398_22255 (fasta) H_bubblegum GRM1A (details)
                                            EK398_22260 (fasta) HMM06249EutQ_3_grm1 GRM1A (details)
                                             EK398_22265 (fasta) P_paleCyan GRM1A (details)
                                              EK398_22270 (fasta) Hp_grpu_fadedOrange GRM1A (details)
                                                   EK398_22275 (fasta) HMM06723EutJMreB_1_grm GRM1A (details)
                                                      EK398_22280 (fasta) HMM01923cobtr_3_eut2 GRM1A (details)
                                                             EK398_22285 (fasta) HMM00465alcdh_3_mix GRM1A (details)
                                                               EK398_22290 (fasta) HMM10662PduV_1_mix GRM1A (details)
                                                                 EK398_22295 (fasta) Hp_euts_oldRose GRM1A (details)
                                                                       EK398_22300 (fasta) HMMgreae_1_grms GRM1A (details)
                                                                                       EK398_22305 (fasta) HMMgre_1_grms GRM1B (details)
                                                                                                EK398_22310 (fasta) HMMalddh_2_egra GRM1A (details)
                                                                                                 EK398_22315 (fasta) H_periwinkleBlue GRM1A (details)
                                                                                                  EK398_22320 (fasta) H_sky GRM1A (details)
                                                                                                   EK398_22325 (fasta)
                                                                                                         EK398_22330 (fasta)
                                                                                                          EK398_22335 (fasta) H_fuchsia GRM1A (details)
                                                                                                               EK398_22340 (fasta) HMMreg13411_1_GRM1 GRM1A (details)
                                                                                                                     EK398_22350 (fasta)
                                                                                                                           EK398_22355 (fasta) HMM00107alcdh_2_mic1mix EUT2x (details)
                                                                                                                               EK398_22360 (fasta) HMMreg00392_1_rmm1 SPU6 (details)
                                                                                                                                   EK398_22365 (fasta)
                                                                                                                                           EK398_22370 (fasta)
                                                                                                                                                    EK398_22375 (fasta)
                                                                                                                                                         EK398_22380 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_periwinkleBlue
       H_bubblegum
      2x H_fuchsia
       H_sky

BMC-Hp(map on tree)

       Hp_grpu_fadedOrange
       Hp_euts_oldRose

BMC-P(map on tree)

       P_paleCyan

(complete list of loci)

Protein sequences:

>EK398_22230
MEKDVFENGMKMEKKGLTKFSMIAYGLGDLASQFVWTFVGTYLTVFYTDIVGLAPVAVSMIMLIARLWDGINDPMMGMIAERTRSKLGRFRPYIAFGSPFLALFSVLTFTGPFGNGTAGIIWAAVIYIIAGIIYTLVNIPYGALAAVMSEDANERNQLNAWRSVGMNVGMIIVNSLSSFIMLAFSDGSQVATGRGYFMTALIYAVISIPLFFAVFATSREVVQPMRNENKVPFLTTIKNVIGNKYLMIVFLIVILQMTAFMGRIAVTTFYVIYCLGAFTLIALLMTIPSIGGALCSLAIVPLVKRFGKRNVLMVSLILQGIGLLVVYFADFDNLSMIIAGHVIFGLFNMGFPISLSLVADSVDYQELKSGVRTDGTAYATYGLATKIGNAIGASVGIMLLHSFGYRANMEQSMATKNGINLVVNLIPAILFFAAALACLLWNLSDKDTDDIRAQLDKKRENIND

>EK398_22235
MRLIEPWENIEINVLAEDRIMQHFDLNIHLIYVLAGEVTIEKEGTIISLQKNDFYILSKSLVHTVYTKNARAFEIVLEYYFEEQENQVFEGNSVTENKRADNQVIQSIERLLKLYVLQEKHTVSEVFEEYFHILQILEKEYTKPSTIEEERSMKQKVYELKFYIDNNFDKDIRLVDIANKLYVSDQYLSRSFSNEIGMPMNEYLIRKRLEKVRKDLLETEKSITDIAFSAGFSNINSFNRLFKKYQGLTPSEFRKETKAMAKVSSKQNSLEEKDLRNLEIYFKEKDAKISDETIQVSMQTSSKQNFQKNMINLGYAGDLTHALFAEQIHYLQENNPFNYGRIWGLLSEEILEQVGEAYDFSTVDEILRIMLKAGIKPFLELGFKGKLIHESHTQIVKSHPFIRKSYKLSDLIQRFQVFFHHCVDVFGLEEVSTWMIEIWKPNPLVLKTIGCEDLMRIDQDGVQLNLAKEKTYIDVFSKIKKAVKQIVPMIQIGGCGLSLDIETRDLSMFLTQWTMSKGAPDFLSLSIYPMDAVKQQLNQKKQHHEPISPNSDYMLHRIKDFKELLTEINYQGKTFITEFNVTILSRDIINDTAFKGSYILKNALGAMPYCDLIGYWQLTDLSVTTFDTANKEIFGGSGLISKSGIPKIGYYAYRFLNRLGNQVVYQSEDLLITKDDPNKIQILCYSYSHLNSTYYYDHSSVFTRRNAAALFASGNVQTKQVLLKDLKEEESHYRIKYYRIGQKTGNILEEINQISSSDRLDDEMITYLKHRCEPQLEIREGQSRNHQLKIELELFPQDIQLIEIQKVSR

>EK398_22240
MKSDALGMIETKGLIGSIEAADAMVKAANVTLVGKERVGGGIVTVLVRGDVGAVKAATDAGAAAAQRVGELLSVHVIPRPHSEVETILPSTNA

>EK398_22245
MEDYEVILNAIMAHLNPEDVPNDDSIPVGISNRHIHLSQAALDKLFGNHYQLTKLKDLSQPGQYACKECVTLAGPKGVIEKVRILGPVRAETQVEILQSDTFKLGVKGALRLSGDLDGTPGLTLIGPNGAFEMAKGVIIAKRHIHMLPEEAERFGVTDGQVVTIDFAGERGGSLNNVVIRATANSGLECHIDTEEANALGVTPGTTIKIRN

>EK398_22250
MNTFDKDLCSVQEARDLARAGERAAQEFATFSQEQVDAILKSMKEAAEKFSVCLAKAAVEETGFGTVADKAYKNHAAGTLLYEEIKDEKTVGIIAEDTTKGTLDVAEPVGLVLGIIPSTNPTSTVIFKAMVALKSRNAIVFAPHPAAAECTKKAAGMMSRAAEAAGAPKGIISCVSTPTMASTNELMHADEVSLIIATGGPGMVKAAYSSGKPAIGVGAGNSPAYIERSADVKKAVSQIIASKTFDNGTICASEQSIICEEINEAEVIAELKAQGGYFMSEEETAKVCGLLFKGGGHAMNAKFVGRKPQVIAEAAGFTVPHSTTVLIGRQNGVGAGNPLSFEKLTTVLAFYTVKDWEEACHLSIELLQNGIGHTMSIHTNNRDIVLKFAAKPASRILVNTGGSQGGTGISTGLPISFTLGCGTFGGSSVSENVSPKHLLNIKKVAYGLKDVTTLLAEDTSFSHPELEEPLDACLTEKPVKASQPSEGKTDNSSMKDFSAAELSELAEVVRKVLTQMNA

>EK398_22255
MNALGLVETKGLLAAIEASDVMLKTAEVSLTQKEIVGGGLVTVMVSGDVGAVKTAVDAAASAVTKLEATLLVTTHVIPRPDKSLSLFEGKEETQESSDESVSIVEEAPQDAEEVLISNENHEETIIEGSQESEAALSPIISGATLSQWGKTGKIAEMEAALTEMKVIDLRKLAKKQTNFAISKKDVHKANKEQLVSALSLHFQKG

>EK398_22260
MKELICLEDVTKAHEAGEPLCVNQNTIITPAAQDLIEELHVPLNESCETQSKELNLPNELNQETLLQLLKMILAGETSPFQCEKHASGLKVVKGSTVEMKPFETGNPEAQVFYQELISKEEAKISAGFLEIDHSRFDWELSYEEIDYVISGNLEITIEGQKFTACPGDVVFVPKGSKVTWGSNDKVKLFYATYPANWSDLL

>EK398_22265
MVTARLIDNIWATRKSEQLNGLKLMIAEIIGGSRDGEQMIVCDVIGAGIGDRVIVTCGSAARRMLEDDAIPVDAAVIGIIDEGCESV

>EK398_22270
MDCRIIKSPGEGTLAILNRRKGSGPKAALEIPDAVGLVQGKLIEMVCAADVAEKAVGVTVEDIRGSCPQNMILLAIFGDTASVEAAIEEIKRKEKERKW

>EK398_22275
MTMNDISACDHLVAEFEAVINKPKKNSTRTLYTGVDLGTACIVLAVMDENYQPVAGAYRYADVVRDGMVVDYIGAITIVKELKAELEEKLDTELIYAAAAIPPGTDALDGGAIKNVVQGAGFELTNVLDEPTAANQVLAIQNGAVVDIGGGTTGISIIKNGEVVKVVDEATGGTHLTLVTAGAYKVSFSEAELYKRNQDNHQELIAVLKPVVEKIATIITEQITGFEINGLYLVGGTACLTGIEKIIEAKTKIKTYKPLNPMFVTPLGIALSCTDEVL

>EK398_22280
MRFITEQELQLKNRQKSIERFLLTKNERLTPGAKQFLTDHQIPIVTHDETDTAGGSSDEMMKNLALVSKHKTFFPLLEVELWEAALEARNVCSASCKRITALTQLVKTIATQNLEELPCSENEKDQPIELSEISEVQIFQPGGKVALKLRRAIIYAKTIQTCVTLEQQAALEQLIYLIAKEIEQLEKL

>EK398_22285
MGSFKMATKIYSGSNATTYLKDCRCQRALVICDPFMVISGMVKKVTAILSEANSSYQIFSEIVPDPTIEVVTKGVAYAADFQPDTIIALGGGSALDTAKAVRQIYQQAGLESAVQLICIPTTSGTGSEVTSFAVISDPSVNGKFALVDDAMIPDIAILDPAFTLTVPSSVTADTGIDVLTHTLEAYVSTNATDFTDACGEKAMRIIWQDLVKVVADGEDAQRRERIHNASCLAGMAFSEASLGICHSLAHALGGRFHIPHGRANAILLPHVISFNAGIESNQDLPALNKYAEAANLLGICSTTERTTVNLLIAGIQKLTRKLDIPKFVTDLGINEDAFIAAIPEMAEAALKDKCTLTNPRQVTVADLAGIYARICRGEC

>EK398_22290
MRILLVGPRESGKLKIANYLEKTNAQPLKKVANIMYYRRTILVPDSYLESPWMHKHVIALQQTASCGIFLQPVTAKRRSYPPNFAKVFRIPIYGIVTYHKSYEESALQQAKAQLLACGLEQVDLVLDLEKEELHQIEQIILGRGRENGEF

>EK398_22295
MSELLAQRVIEESVPGKQITLAHVIAAPIASVYQSLGIDAAGAIGILTLSPFETAMIAADTAAKVADVEIGFLDRFTGSVVITGDIESVETSLTEVLRVFKEVLHFSVVDVTRT

>EK398_22300
MVNVKEERIERQAMIFNVQKYSLYDGPGIRTIVFFKGCPLRCQWCANPEGIKRRFEVMFKESVCTNCGACVDACPLGIHYIDEHGKHQVRRDISCNGCQECVNACPMKALNITGSIMTISELMEVIHEDDAFYEMSGGGVTFSGGECTAQPEAALALLKACKADGLNTAIETCGHSHMSKLLEMADYIDLFLYDMKHMDPVRHNELTGISNEKILANLKELLVRGYKVQIRMPMLKLINDSHEEIKEIVEFLLPYKDFPNFKGIDLLPYHKLGVNKYGQLGMEYPVEGDPSLSDADLDQIESWIAEYDFPVRVVRH

>EK398_22305
MDIKEFSAKLAEATKELSSEERQALMKMFASVSDEVKKDDIVTEILVSDEGTEIPNGITKRLQALKDNYLEQVPSITTYRARAITKIAKENPGMPKIVLRAKCFRYCCETAPLVIQDHELIVGAPNGKPRAGAFSPDIAWRWMEDEIDTIGSRPQDPFYISDEDKKIMREELFPFWKGKSVDEYCEDQYREAGVWELSGESFVSDCSYHALNGGGDSNPGYDVILMKKGMIDIQNEAKAHLEELDYENPEDIEKIYFYKSIIDTTEGVMIYARRMADYAAELAAKETNPKRKAELLKISEVNRKVPAHKPDTFWEAIQAVWTIESLLVVEENQTGMSIGRVDQYMYPYFKADLEEGRMNEFQAFELAGCMLIKMSEMMWITSEGGSKFFAGYQPFVNMCVGGVTRQGRDATNELTYLLMDAVRHVKVYQPSLACRIHNHSPREYLKKIVDVVRAGMGFPACHFDDTHIKMMLAKGVSIEDARDYCLMGCVEPQKSGRLYQWTSTAYTQWPICIELVLNHGVPLWYGKQVCPDMGDLSRFKTYEEFETAVKEEIKYITKWTDVATVISQRVHRDLAPKPLMSIMYEGCMEKGKDVSSGGAMYNFGPGVVWSGLATYADSMAAIKKLVFDEKKYTLQELNEGLKADFANNDRMRTDCLNAPKYGNDDDYADLIAADLINFTEAEHRKYKTLYSVLSHGTLSISNNTPFGQMTGASANGRKAWTPLSDGISPTQGADFKGPTAIIKSISKMSNDSMNIGMVHNFKIMTGLLDTPEGEESLITLLKTACHLGNGEMQFNYLDNNTLIEAQKHPEQYRDLIVRVAGYSAFFVELCKDVQDEIISRTMLTKI

>EK398_22310
MQFVDKDLKSIQEARILVESARDAHFLLREYDQETLDRMIQRMITEVHQLLPELAAFEVSVTGKGNEQDKTQLYQSFLAQFNDSLQEQVIGVLNTNGVPLSKIGIPFGVVAVILPAENIVLNALFATLSALKAGNTVIFIPPNKTEEAAAKLVEILNQANSGLPKSSFSHMENTTIEGVKALIEQEAVDLVINIGMADYFDLRAYPKPIIYGGCGSVPVFVERTANVSQAAQAIVSSRAFDNGLLPSAEQFVIAESVIAKEVKEQMVEAGAHFMSVAEEKQLLTKLFLSNEINPSIVGKDAQTIAGIAGFTVSEETKVLVSEQPYIFDENPFTTALKCPILTFYLESDWIHACDKCIQLLKEKRNGHTLAIHSNNQCIIKEFALKKPVGRMIVNAGASLAGIGIDSSLPVSLILGGMPTGRGFKAKNITAKDLTYVREIGYTSVKEPSKGVNKRISDEQLLIEKFLQKIIEQ

>EK398_22315
MERYEAIGAIETFGLVFVLEAADAMCKAADVELVGYENVASGYISVIVRGDVAACKTAVETGIASVEEMGAEVYSSVVIPSPHIDLGKIIDRYSLEQLLPA

>EK398_22320
MRYRGEEALGLVETVGLVPALKACDEMLKAANVELISYENIGSTLVTIMIKGDVAAVEASVAAGAKAAEGIGTLTAQNVMPRPIRAVGDIVSVHDIDQ

>EK398_22325
MALPTRMAILNYMFDYNEVDVKEVMSALKKDYGSEKQFNDKMYLDHLLALEANGLCEMTSYDLDKNSELVMRYMITEDGRQTVSKYVDAAYRKS

>EK398_22330
MNSEKSVMQTTVSAESKMKAVGKKFRIAGLGNGLFSGLTYGIYSTLVMVASGYDPLVSAAGFLAAPFVSSGLNDLFAGIWLLFYNAKHGRLKELSRTLKTKPGQMLVVGFLLGGPVANGAYLIGLAMAGAYAIPISATCSLFGSLFAWIFLKQRPTKRVVFGMLLCVAGAIVINWAKPEGAPNFTLGIICALIAAVCWGLEGVFSSFGGAMIDTDVAVNLRELISGLVVLILIVPLVGGLKLLGGTLTAGIPILWLVLSGLSAAASFVCWYKANSMVGCAIGMSLNVTYAFWGVLFCVLFLGQTLTPTIVIGSIVIVLGAIIVTMNPLDLFRKGDA

>EK398_22335
MKYDALGMVETKGLVGSIEAADAMVKAANVSLIGKELVGGGIVTVMVRGDVGAVKAATDAGAAAAQRVGELLSVHVIPRPHGEVETILPHTTNE

>EK398_22340
MVTRIDTKKLHSIGEAAEICHVSRKTLRFYEELGLLVPDHVSPKNGYRYYSEDTVMLIPVLKYYKQIGFRLQEMTKVSNTTDYFYHQRNFLSKLDELKKEEERIQNCHESVSDWVGLLNEGTMAIENNITSISLKYIDRDQYYFLEQGFEYDYKKSIINIEWTNLLETTESEITGPVILGFADYKAKAQGMIKQATVTQKPVRNSKFLLPRQAFGGQMFVCMYHFGDQKDSADKYPLLEKWAKEHNYEIGPNCYERYVIDYWSTQDTNKFVTEIMIPATKL

>EK398_22350
MKFGVIGTNFVTDFFMAGAAQVAECEVVAVCGTSLEKAKGFGEKYGIPHAFNSYQEMSESQLIEAVYIAVPNSLHHPITTYFLEKGIPTFCEKPLAANHEQVKELIDCAKKNHTYLQEGLIPLYNPNFQILRDNLNLVGRIRQVNFNFSKYSSRYDAYLSGENPTTFRNELANGATMDLGVYVVADCVGLFGKPNKILSTASLLDTGTDVAGSSILSYDDFNVTLNYSKASDTVNTCEISGELGQLLIDQPSQPQRISFIERKTGKRTELGIAPKENFSYEIAEMINQIKKNEIESTKVPFDVSLAIHWTLTEMRRQSGIVFPMDKF

>EK398_22355
MVYQHANFERVSIILTKNVVINGVEDVRLIEETVDPKAVSAKECLIESEVSLISAGTELSRVFGLKKGAVYPVRPGYCSVGKILAIGDDLAGFKVGDRVLFNGPHSSLQFYDPSKSDGGVLFKLREDTSSIEGSFLMMCWIAMNGILPADVKLGDTVAILGMGTLGLILSIYYQQMGVEVIALEPITDRAELAKSIGVDHVINCAPNDQYESVMEITEKKGVDIVVDATGLSESIETAIKIAGKYGQVILMGSPRTDYTTNVTNSFNAIHTKMLTVIGAFNRRYPYQEKKGSRLSIHRSLKYIESLLNKKIIDVDRFISHVIAPTEENLMEAYDGLMNKKNEYKGVIIDWNKKEDLA

>EK398_22360
MEKTQPFKYALIKNDIVQAIKTKQLNADDKILSEAKLCKKYNVSRITVTRAINELVAEDYLYRIQGKGTFVKGKQLSEGVSQLSSFTKRMKEKKLKLETRVLETASVTMPVKMANFFNLPSDKNVILLKRLRIVDGELLCLSIAYLMPEFFYWTTLEDMEHESLYDLLENKYDFKLGNATQEFEVGYLNEKNAKFLEISSQDPCLKLSLYSTLSDGRPAQFEETYYVGSKYAYQLLLPAPHSFNNVINIEEL

>EK398_22365
MLFSDIVNQHYDSLNEVDIQMVKYIHAHPKEVTTMGTNDFAKVCHSSKSSVIRFTQKLGFTGFSELRNFLKWQNNPNDIGKDAAFKRRIFSDAQRTIRYLEENNWEKIYQALENSRNVYLLGTGVTQQNQAAELQRLLLLIGKPAQMIPASSQSNEFKRIMENITENDLIFVLSLSGENQHLFNVLNVLSTYHSTIVSITNMQNNLLSGRADYSLYASSSRSPNPTDWWLQTASSFFLLIEAFAFGYVDYCRSKED

>EK398_22370
MKLEKQSVVIAGGGSTYTAGIVMMLIENQDKFPLRKLKFYDNDEERQNIVAKACEVIVKERAPEIEFLATTDPEEAFTDIDFVMAHIRVGGLKMREQDEKIPLKYGVLGQETCGPGGMAYGMRSIPGVLELIDYMEKYSPEAWMLNYSNPAAIVAEATRRMRPNAKIINICDMPVAIKKSIADIVGLDSESEIVDRYYGLNHFGWWTEMTDKQGNNLMPKLKEHVAKFGYAAAEDEGNPLLEETSWMDTFQKVKDVYAVDPNTVPNTYLKYYLYPDYVVAHADPNYTRANEVMDNREKNIFAECERIAAAQTAEDTTIEAGEHAEFIVQLARALAYNTYERMLLIVKNEGAIANLDDDAMVEVPCIVSKRGYEPLCMGKIPHFQKGMIEQQVAVEKLVVDAFEEKSYQKLWQAMTLSKTVPSASVAKQILDEMIKANGDWWPELK

>EK398_22375
MKSKFSQTMQDFSRAVIVPVKFMAVMGLFLAVSVILQLEFMPSVVQTFGGLIKTMMDSMLNNLALIFCVGITASLAKKKKVEAALISLIAFLFFLAANNAWLTLTDQLAEAGEMGLFGTGQAVVLGFQVVDMNVFLGMLVGCLVAFIHNRFSDKEFVDFLSIYGGSRFSFMILIPVILITAIGMSYIWPVVNNWISSLSGFILTTGLLGVFIYAFGNRFLIPTGLHHLLWMPFCFTALGGTAEIGGQVYNGAANIFYAEMANAGSITSLDPSLRFATFGFVKIFGSIAVSLALIHCAKKQRKEEVKGMILPSMFVAAVAGITEPLDFSFLFASPLLWLVHSLLTAISETILWGIGARTYMLYGLIDTFVSNSVFSPSVTKFYLVIIVGIVMSVIWYFIFVLLINKLNIKTPGREDDPEEIVVADAATGEQLVTASANDFDLVVAGLGGKENIESISNCFTRLRVTVKDEELVDSAQLEKISQQKGVVLNGTNVQVIIGMGVQSFKDDICEKLGMSEG

>EK398_22380
MTKIYQSILDTIGETPIVKLNQLVPENSAEVYLKLEFFNPGGSVKDRIALNMIVAAEKAGDLKPGDTIIEPTSGNTGVGLAMVGAAKGYPVIIVMPDTMSIERRKLIQAYGATLILTPGAEGMKGAIAKAQELASQDGYFLPLQFNNAANSAAHRETTAREIQEAFADSGLDAFVSGVGTGGTITGAGQELKRTFPSLKVYAVEPEESSVLKGGAHSPHKIQGIGAGFVPEILDTEIYDQVLSVSSEKALESAREVAAKEGILVGISAGAAIHSALQVAKELGADKKVLAIVPDNGERYLSTVLYDFDD

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021