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BMC type: GRM1A


Organism: Clostridium sp. Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

        DIU45_11220 (fasta)
             DIU45_11225 (fasta) HMMreg00486_1_mix FRAG2 (details)
                    DIU45_11230 (fasta)
                       DIU45_11235 (fasta)
                          DIU45_11240 (fasta)
                              DIU45_11245 (fasta)
                                   DIU45_11250 (fasta)
                                    DIU45_11255 (fasta)
                                     DIU45_11260 (fasta)
                                           DIU45_11265 (fasta) HMM00465alcdh_3_mix EUT2I (details)
                                                  DIU45_11275 (fasta)
                                                   DIU45_11280 (fasta)
                                                     DIU45_11285 (fasta) H_sky GRM1A (details)
                                                       DIU45_11290 (fasta) H_periwinkleBlue GRM1A (details)
                                                                 DIU45_11295 (fasta) HMMalddh_2_egra GRM1B (details)
                                                                         DIU45_11300 (fasta) HMMgre_1_grms GRM1B (details)
                                                                               DIU45_11310 (fasta) HMMgreae_1_grms GRM1B (details)
                                                                                  DIU45_11320 (fasta) HMM10662PduV_1_mix GRM1A (details)
                                                                                   DIU45_11330 (fasta) HMM06723EutJMreB_1_grm GRM1A (details)
                                                                                      DIU45_11335 (fasta) HMM06723EutJMreB_1_grm GRM1A (details)
                                                                                        DIU45_11340 (fasta) Hp_grpu_sand GRM1A (details)
                                                                                         DIU45_11345 (fasta) P_paleCyan GRM1A (details)
                                                                                             DIU45_11350 (fasta) HMM06249EutQ_3_grm1 GRM1A (details)
                                                                                                 DIU45_11355 (fasta) H_bubblegum GRM1A (details)
                                                                                                     DIU45_11365 (fasta) HMMptac_1_mix GRM1A (details)
                                                                                                       DIU45_11370 (fasta) H_fuchsia GRM1A (details)
                                                                                                        DIU45_11375 (fasta) H_fuchsia GRM1A (details)
                                                                                                            DIU45_11385 (fasta)
                                                                                                               DIU45_11390 (fasta)
                                                                                                                    DIU45_11395 (fasta)
                                                                                                                         DIU45_11400 (fasta)
                                                                                                                            DIU45_11405 (fasta)
                                                                                                                                DIU45_11415 (fasta)
                                                                                                                                       DIU45_11420 (fasta)
                                                                                                                                           DIU45_11425 (fasta)
                                                                                                                                            DIU45_11430 (fasta)
                                                                                                                                                     DIU45_11435 (fasta)
                                                                                                                                                        DIU45_11440 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_periwinkleBlue
       H_bubblegum
      2x H_fuchsia
       H_sky

BMC-Hp(map on tree)

       Hp_grpu_sand

BMC-P(map on tree)

       P_paleCyan

(complete list of loci)

Protein sequences:

>DIU45_11220
MILVITIYYXLLTQSTYAKTSEIKLYPGGKPIGIKLNTKGALIIALSDIETKDGIVSPATKAGIQIGDSIIKINGVDIKSSEDVSTYVNRCNGDEITITVYRKDKTLDIAVKPVLSANDNKYKIGLWVRDSTAGVGTLTFYDNNTGKFGALGHPITDVDTGNIMNISNGEVVSSNIVSVRKGTKGNPGELRGIFVDEEKCLGNIYNNTECGVFGEGNIGLVNNSYSDPLPVASRDEIRIGKAQILTTVEGSEPRFYDIEIEKLLPQKEPGSKSMIIRITDKEFLEKTGGIVQGMSGSPIIQNGKIIGAVTHVLINKPDTGYGIYIDWMLNDAGILTK

>DIU45_11225
MEQTSISVLIADDNKEFCNILNDYLLSQRDINVVAIAKDGIEALKLIQEKKPELVVLDIIMPHLDGLGVLEKLNSMNLDPMPRIIVLSAVGQDKITQRAITLGADYYVVKPFDMDVFTKRIRQMFNNTITSDDTKKPVIVDTPEVKATQSEPMNLEAEITNIIHEIGVPAHIKGYMYLREAITLVVNDIEFLSAVTKELYPTIAKKYNTTASRVERAIRHAIEVAWSRGQVDTINKLFGYTIHNDKGKPTNSEFIAMVADKLRLKNRVG

>DIU45_11230
MKKNLSTLEDSLEEFMINCTNKDLTKKTLMSYESTLKLFFKYLEEEFNITEVEKVEEKHIREYINFTKERGKYSFVVDVRTTSINKPHNRNDFGKEVSIATINNYLRNIKVFFNFCLENRYIKISPAMRIKQFKATRRPKEYITDNDFKKLIGAIDTTTFHGHRDYVIIHLLTDTGMRIGETLELTEKNLLLDKRAIFIGADINKGRRDRYVFYSVTMQNILTRWIDYKDRYLNTSLLFPSSKNQKLGVSNMEKNLKKYVLRAGLNPNISCHHFRNSFGKRALMSGMGIFQLSVLLGHSSVEVTQQAYADLTTEDIRKSYQLHSPLENMQK

>DIU45_11235
AFYISVRATISTFPAIIGDSYYNEWKGKYKTDKWRRIIYEEVKFEPVVKSIVHKDETKEEVVQEGYTEKIAKLHEDYNPDEEYTPREQRKEFDAVGMLGKILVQDDGTCVVGGYCLSNDEGIATNAPTGYKVMERVEKDIVMISFHQSNWTQEQLRKLYNLIGTV

>DIU45_11240
MKXXAMIILKEAEKLNPGGWVKHSMYVAEGAKLIAEQTDNLDSELAYILGLLHDIGRREGVHGMRHGLDGYNYAIRNGYDLVARTCLSHTAFKYNNEVIIVGKWDGTKEEYNFVKEYLSGTDETDYDKLIKLCDYLSLPNGFCLIEKRLVDIALRGGINEYTIPRWKSTFENQRYFEDKIGKS

>DIU45_11245
MNICVLMGSMRKNGNTEMLIRPFVEQLKSQDVEVQYIWLCDKHIEPCKSCFVCQDIDDKPGCPIKDEMEQIYKSVLEANCIVFATPIYSWSCTAPMKVVMDRLFCMNKFYGNTKKHYGLWENKKCAIIATCGYEIESGADLFEEVLKRLSIHSHLDYLGMLTVRDINGIIDFQTEEVIENAKDFALKIYNKCE

>DIU45_11250
MRNRLGMSGSTIYSNPELYSELFIEGIDHIEIGEFPNEEALNKFLEINKVKGLSFGIHSPLLRDGSKYDLLEKVKYKPSDAWDMLEIEAKRMADLGAEYLLVHFPYFKDEVSLNTNQLIKEGLKKLSYIQEKYGIKLICEPKLGLNRSGAGIKYLQNFPIEIWEKYNIQICIDIGDYLIATGDEILDYLEKWKDFIIEVHLHNIHYEGEDYVWIPVHPDQEHNGYSHKVEHIIRFLAQCKDVSFIFEHTPETNPSKKVVEEGLKWVREIIG

>DIU45_11255
FKLKKEYWNKGIMTECIKKTLEFGFSDRNYNRIEALVDKRNIGCKKTLENNGFKLEGLLREYEFENGIYVDLEMYFILKREYIK

>DIU45_11260
MKTIFENNIIRLREANLEDAKELLSVTNDEEVIKYYGMDPYKNIREAEDEINWFISLLKEGKGARWVI

>DIU45_11265
PDPSVEIVAAGIKKLQSCNAQVMIALGGGSSIDGAKAIKEYAKRITGGVSSIEEFYAIPTTSGTGSEVTEYAVITNKQEGLKYALTDKSLLPTVAILDPELVKSVPKAITADTGMDVITHAIEAYVSKNATDFSDALAEKALTLAFRFLPQAYADGNDIVAREKLHNASCLAGMAFNAAGLGITHSLAHAVGGKLHISHGRSNAIILPHVIEYNANLNKETFRAEYSIAAKKYQRIAKLLKLHAPNVNIGVNNLIKSIVELQKTLMIPTTLKEQGADMELAQASREEIINAALKDVCTTVNPREASKEDLSIILDKIFE

>DIU45_11275
MNGVSKAVNLEAIAAKKKLTSNFFKRGISLALFSGLAYGLYTAFLTMGMTKGVWADWYGANTAGLSAFVVAYLLAAIGNAINDTCSAIWALLYSGVKGKFGDFVRCINTKPGRIMILAALIGGPIAGTAYVIAIQMAGSIVVPISALCPAIAAILGKILYKQELNKRMAFGIAICVFASFLIGSTGISGGASTSTLIGILIAIIAALGWGFDRCVAGYGSAMIDPEIGICIRQVTSGIANLFILVPIFGMMAGGINISTDLVVQAFTSGPAMAWFALSGLLSFITFMTWYAGNSMCGAGLGTSCNATYSFFGPLFCLLVLGVYGGIDGWALPSVAWIGAVIMMLGILTISMNPLDLLRRKKMEVE

>DIU45_11280
MKPLNYAILKYFTRVKEACADDVIRELKGEYGNFKALKKNAVVNALMTAEANGLIEETRFELDKNKELKVYYHAHEEGAATINKYIND

>DIU45_11285
MRYYGEEALGLVETVGLVPALEAADKMLKAANVELISYENIGSTLVTIMIKGDVGAVKAAVEAGAEAAAAIGKLTAHNVMPRPIREVGDIVSVHDIDA

>DIU45_11290
MARYEALGLIETFGLVFALEAADAMCKSANVELIGYENVASGYISVLVRGDVGACRTAVEAGVAAVENMEGGNLYSSVVIPRPHQDLEKIIQRYAIPMPITE

>DIU45_11295
MNIIDNDLLSMQEARILVENAREAQRKLATFPQEKLDEIVACMTEEIEKHLKELAEISNEESEYGKWEDKYIKNQIVCKYLKDRLKGMKCVGVIDEDKTSRTRDVGVPMGVIIAFPPSTSPVSTTIYKALIAIKSGNAIIFSPHPRAKKSICKTVDILIKAAERVGLPEGALAYLHIVTTGGSLELMNHKDTSLIMNTGVPEMLDAAYKSGKPVIYGGNGNGPAXSKNFDYGVVSAAEQSVVVDSCVATEVKQEFIKNGGYFMTKEEAEKLGSIFFNKDGSFEEELIGKSPQFLAKYAGFDVSQDVKVLISEQKYVSKNNPYSREKLCPVLAFYIEEDWMHACEKCIELLLSERYGHTLIIHSKDGEVINQFALKKPVGRILVNTPGTFGSMGATTNLFPSMTLGSGSAGEGMTSDNVSPKNLIYIRKVGYGVRTVDEIVKAVDHEENSTFTVSNNKLNANEIDNYKLLESILKKVLDNLK

>DIU45_11300
MDIREFSNIFMEATKNMSDEERASLMKMFESVSKEITKEEPATLNVAHDNNGQIPDGITERLVKLKETYLKHVPAITTHRARAITKIAXPKSVLRGKCFKHCCETAPLVIQDNELIVGAPNGQPRAGAFSPDIAWRWMVDEIDTIGNRPQDPFYISEEDKKIMREELFPYWQGKSVDEYCEDQYREAGVWELSGESFVSDCSYHAINGGGDSNPGYDVVLMKKGMLDIKREAEEKLAELSYEKPEDIDKIYFYKSLIDTAEGVMIYAKRMSDYAAELAAKETNPKRKAELLKISEINARVPAHKPSTYWEAIQAVWTIESLLVVEENQTGMSIGRVDQYMYPLYKDDIEAGRMTDFEAFELSGCMLIKMSEMMWITSEGGSKFFAGYQPFVNMCVGGVTREGRDATNDF

>DIU45_11310
MSNGNLGVIERKATIFNIQKYNMYDGEGIRTLVFFQGCPLRCKWCANPEGLVKKHRVMFKSNLCVNCGACVSVCPVSIHTISNETLKHEVSRDIDCIGCGKCKEACLKSAISIVGETKTISELLKIIEEDRTFYEMSGGGVTLGGGEVLMQPEAACSLLMACKQEGINTAIETCGYTKLETILKVAEFTDLFLFDIKHIDSDRHFQLTGVRNEQILENLQELLRKKYNVKIRMPLLKGINDSQDEIEKTMEFLMPYKDYRNFKGIDLLPYHKMGVNKYNQLGMEYPIEGDPSLKNEDLDRIEGWIKKYDLPVKVIRH

>DIU45_11320
MRKKRIMVIGPSGSGKTTIVNALNDYDGPLRRTQDLIYGKNTIDVPGAYIENAWMYKHVIALAQDASHVLILVDQSNCTEIYSPGFAKSFTCPVIGVITKCDLIPEDEEKCLRQLKIIGVSEPYFHISFPMGTGIDALKKYLFEKGEE

>DIU45_11330
MSKKKITFEYCDKMVQKFEEVIEKPIINDSSVYYTGVDLGTACVVLAVLDENYKPVAGAYRYADVVR

>DIU45_11335
AANNLLKIENGAVVDIGGGTTGISILKDGKVIQVVDEPTGGTHFSLVISGAYGMPFKEADKFKRDNKNHKEILPILRPVVEKVSSIINNQIKNYDVNEISLVGGTCCLTGIEEIIQKQTKIYTHKPKNPMFVTPLGIALSCTQDIIE

>DIU45_11340
MDFRIIKSPSDSTKEILKRRMGGSCKTDLENADAIGLVQGKFIDMIYAADIAEKAVGVTVEDIRGLCPQHMVLIGILGDTASVEAALNEIKLKMKEEKQYDSSKTC

>DIU45_11345
MIAARLVDNIWATRKAESLSGLKFMLAEEIGGINDERRFIVVDIIGAGIGDKVVVSTGSSARRMLGDDNIPVDAVVIGIIDHDCNFD

>DIU45_11350
MKKLICAKDVEALILKGEKTLYVDGSEIITPSAQDLAKNNGIVFTAAAPAPKVQDLGVNKTPSIDNIDSEMLLNFFRKMMDKGLLEEMLQCLKQKNLPFEAECDPNGLKVVRGNTVKMDVFDTGNPNAKAYFQELVSKKESKMSAGFLVIENSKFDWELTYEEIDYVIEGTLTVEINGKTYTAYPGDVLFVPSGSKVVWGSPDKARVFYTTYPANWADLL

>DIU45_11355
MKALGLIETKGLLAAVEAADTMVKSADVSIIEKTYVGGGLVTILVTGDVGAVQASIEAGVAAVKKLDEEFLVSNHVIPRPHEEVESIIGPNTPPEVLEVPSFNEELKEVEQAKEIQKTEEVEVEVEVQTEKLEETEDVEEAEQIEEVKEIEDIEQKEEVYVVEAEDEIKEDQDALKMDLDKLHKLDLENLHKDDVDNLVNKNGIEQTLLXLEI

>DIU45_11365
MENCEEILRVLLEAIKSNEANNGIQKNSSEIPVGISNRHVHLSQKDLESLFGKDYQLTKLKDLSQPGQYACKEVVTICGPKGAIEKVRILGPVRSKTQIEVLAGDCVKLGVASHVKLSGDLNGTPGITVIGPKGSVQIEEGLMVAQRHIHMTLEDARNLGVHDGEIVSIKFEDLRGGVYSNVAIRANNSSQLECHLDIEEANAMGINSKSKITIVK

>DIU45_11370
MKYDALGMIETKGLIGAIEAADAMVKAANVYLIGKEYVGGGLVTVMVRGDVGAVKAATDAGAAAAQRVGELISVHVIPRPHSEVEVILPASKEATK

>DIU45_11375
MKHDALGMIETKGLIGAIEAADAMVKAANVYLIGKEYIGGGLVTVMVRGDVGAVKAATDAGAAAAQRVGEL

>DIU45_11385
MLLEKRVDNEELNSQFMNKTDEEIVAEARNGDNRALEYLLCKYQNFVKAKAKSYFLIGADKEDIYQEGMIGLFKAIRDFRTDKLASFKAFAELCVTRQIITAVKTATRQKHIPLNTYVSLNKPIYDEESDRTLLDIISGVKVSDPEELVISREEVESIENEIGEVLSDLEMEVLMSYLDGKSYQEIACDLDRHAKSIDNALQRVKRKLEKCLDKRK

>DIU45_11390
MRKIFIDGYNVINSWPELRAIKDYSYESARTKLIDIMINYSSFKGYNIIIVFDAHMVKGSLQKKERIGNITVVFTKEGETADLYIEKTVNNIGRVSEVYVVTSDAIEQQVTFQRGANRVSSLEFYHTVMEANKKISKKYEKTYSQDRNLFEDMIDSEIAEKLEKIRRSK

>DIU45_11395
MKENKKTNSRDRVKKEYNNKTNMGNEEIIREDIIEGRNSVIEALKSDRTIEQILVAKGDTKGSINVVLALAKEKGVVVKTVDRVKLDSMSLTGSHQGVIAKVTAYKYYHVKEIIDYANSKNEKPFLIILDEIEDPHNFGSIIRTAEVCGAHGIIIPKRKNVGVTPIVYKTSAGATEHMRIAKVTNINSTIDELKELGLWIYGADMHGENCYDVDLKGAVALVIGSEGKGISKLTKEKCDVLMKIPMVGQITSLNASVAGGILMYEVLKQKLK

>DIU45_11400
MTLKVKLIEHTPNPEKVIASAAKLCYSSVGVDEILEGLDKEKTENXMNYGHYSPIEHVSFTFAIEGVSRSLTHQLVRHRVASYSQQSQRYVKLDAFEYIIPPSIENNSKAKEIFIEAMKKDQEYYDEIVEMLFEQIYNESLNKYIREKSLNSTSEVEERVLRKLKSQAQKKAIEDARYVFPNACETKIIVTMNARELMHFFAHRCCNRAQWEIRDMADAMLKEAKKVAPILFKNGGPNCIKGSCPEGSMTCGEIVTVRKKYSNL

>DIU45_11405
MNFQLLKGKFTLEEIKQLNPLVLALIGDAVYEVFIRTYLVEKNRGLNVHKVHVKTVSYVKAKAQSEYMKIIIDDLEDDEMAIFKRGRNSKSHTPKNSDVADYRWATGFEAVIGYLYLCEKEEKLNYILSKIVKYEEDKNDFES

>DIU45_11415
MRIDLLGKVLMIPAILVAFTFHEYAHARVAVKLGDNTPKYQGRLTLNPFAHIDFLGFFMILFWGFGWAKPVQVNPNALKNYYKDDLKISIAGPLANLACSIVAIIVLAILGKILPKSNLTSIINTIVYLTAYYNCFWLFLNLIPIPGFDGFHILKDLFPRQFYKISDKIYGYQLIIFILLIAPILGGGRSLLTYLVQMPAEYLFSFLGNLVGLKI

>DIU45_11420
MKIIKRLTLWMAISLGIQCVGFYYIDKNFLSLESKIKGKKVVEEKVEEKKNKIKIPSDVEKVSVSYDSKYLSYIKNNLLTVVKVQDGQTDEITLEPDAEVSFYKWLPDRNRVLFVEKIVNYGSSKLTLYSYDVKKKDKSLIKEFDWNEESAIVEDIAISTLTGLTYVKIVDSENVSSIYRIDRMGTMTKTYTVPRHISNMELLRREDILLYEGEVYNQVYSSQTSEVLYFPEYERITILGRDDEDKIYIGGLENGLVNKIFYGCITEDTSQWQQIALDVSTENQNIYISAEGNIYIHDKDNKIVREQKSNKETIYEGGFIQFQNNGVVTKSGDNVEIIAYK

>DIU45_11425
NSNKFTGYVLIINDSTRVKVGYSEKLEIEGQTTSEIAENNGAIAAINGGGFTDEATGSLWTGTGAKPTGIIMSNGEVKYNDLSSDDEQREVVAITEAGVLLVGSYSLNELIQHKAKEAVSFGPALIVDVQKAITNGDGGWGIAPRTAIGQRKDGAIILLVIDGRQTNSIGATLKEAQDVLYEYGAYNASNLAGGSSSTMYYKGEVINSPSDSLGERAVPSAIYVEK

>DIU45_11430
MNARKSKKSVKKKSKIKFIISFILFQIVFTGITAPFLAYYGPFENV

>DIU45_11435
MKKTYVLDTNVILYSSTALLSFGNNDVVIPEIVLEELDNFKKDKTDLGANARQASRLIDSLRGEGQLNKGVRLPCGGYLRVEMNHHDTEIPISWDKSKPDNRIIQLCKGLKEKGEDVILITKDTFERIKADIVNIKSEDFYEKVVPEDYNQYTGRIEVYVPSHKIEEFYNKKSLDIKEMLYYNEDKEEYYVPQLYVNQFILMHSMENSKQTALGRFDGKKVVPLYYKEIKPMGISPRNVGQKFMLEALCTEPSKAPLVIIKGPAGTAKTLFSLATGLEKILEENTGQYRRILVCRPNITMDEEIGFLPGTEEEKIAPFMRPVFDNLEILVDSDEKERYKNEKELQDKIRELFDRRIITTEAVAYLRGGSIVKNWLIIDEAQNLSPKQIKAITTRVGIGTKLILIGDPDQIDHPFMDSRSNGLCYASEKMKGSELCYQVTLKFDECERSPLAFEAAQKL

>DIU45_11440
MLNFTQIFKEKKLKLTPQRIAVYKYLCSTNEHPSAETIYKALQEEYPTMSLATVYKALKVLVSVNLIQEINVGEGNFRYDGTIEPHSHIQCVNCSKVDDIKGISFSNLNEEVKKFTDYSILTNQIYFYGLCSECKADNEPKVELV

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
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