Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: GRM1A


Organism: Clostridium autoethanogenum. Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

           D9O40_21625 (fasta) HMM13520tp_1_pdu EUT2C (details)
            D9O40_21630 (fasta)
             D9O40_21635 (fasta)
                    D9O40_21640 (fasta) HMMreg00356_1_pdu1d SPU4 (details)
                     D9O40_21645 (fasta)
                      D9O40_21650 (fasta)
                       D9O40_21655 (fasta)
                        D9O40_21660 (fasta)
                         D9O40_21665 (fasta)
                            D9O40_21675 (fasta)
                                            D9O40_21680 (fasta)
                                                 D9O40_21685 (fasta) HMM06249EutQ_3_grm1 GRM1A (details)
                                                     D9O40_21690 (fasta) Ts_burgundy GRM1A (details)
                                                               D9O40_21695 (fasta) HMMPduS_1_all GRM1A (details)
                                                                D9O40_21700 (fasta) P_paleCyan GRM1A (details)
                                                                      D9O40_21720 (fasta)
                                                                                  D9O40_21725 (fasta)
                                                                                               D9O40_21730 (fasta) HMMreg00072_4_pdu1d FRAG2 (details)
                                                                                                 D9O40_21735 (fasta) HMM01923cobtr_3_eut2 GRM1A (details)
                                                                                                       D9O40_21740 (fasta) HMM06723EutJMreB_1_grm GRM1A (details)
                                                                                                         D9O40_21745 (fasta) Hp_grpu_fadedOrange GRM1A (details)
                                                                                                          D9O40_21750 (fasta) P_paleCyan GRM1A (details)
                                                                                                                   D9O40_21760 (fasta) HMMalddh_2_egra EUT2D (details)
                                                                                                                    D9O40_21765 (fasta) H_bubblegum GRM1A (details)
                                                                                                                              D9O40_21770 (fasta) HMMreg00072_4_pdu1d FRAG2 (details)
                                                                                                                                    D9O40_21775 (fasta)
                                                                                                                                      D9O40_21780 (fasta) H_fuchsia GRM1A (details)
                                                                                                                                        D9O40_21785 (fasta) H_fuchsia GRM1A (details)
                                                                                                                                          D9O40_21790 (fasta) HMMptac_1_mix GRM1A (details)
                                                                                                                                              D9O40_21795 (fasta) HMM06249EutQ_3_grm1 GRM1A (details)
                                                                                                                                               D9O40_21800 (fasta) P_paleCyan GRM1A (details)
                                                                                                                                                 D9O40_21825 (fasta) HMMptac_1_mix GRM1A (details)
                                                                                                                                                   D9O40_21830 (fasta) HMMalddh_2_egra EUT2D (details)
                                                                                                                                                     D9O40_21835 (fasta) HMMptac_1_mix GRM1A (details)
                                                                                                                                                       D9O40_21840 (fasta) HMMalddh_2_egra EUT2D (details)
                                                                                                                                                          D9O40_21845 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_bubblegum
      2x H_fuchsia

BMC-Hp(map on tree)

       Hp_grpu_fadedOrange

BMC-P(map on tree)

      3x P_paleCyan

BMC-Ts(map on tree)

       Ts_burgundy

(complete list of loci)

Protein sequences:

>D9O40_21625
MDANENDIEEVLDKSKGLERSMASRHIQMYTVGATIGTGIFLASGNVINKAGPGGAVVAYIIGALIMYLMMSCLGELAVAMPVSGNVQAYATEFISPAMGFTAGFMKWISCAVTVTAQIVASSIIMKNIFPNINPIIWILLFTILLAVLNILPSGNFGETQFWFASIKVIAVILFVITGIGIITGIIGGKTIGFTNFISDGGAFPNGFNAILASMLSAIFAFGGSDLIATAAGESKNPEIEMPKAIRGFIILITLCYVTCIFLIGCVLPWRQANLAGSPFAYMFKSAGITSASLLVNIIVVTSALSSANSFLYASIRTLWSLAKHNQAPKILAKTNKKKVPIYALIISLSFASFAIISSFIAADTVYLFLISLLASIDIFIYTIDCICQMRFRKNFMLEGNKVEDLKYKTPFYPITPIVAIILYVVVIIAMIIDPTERMAIYTGVPTALILYIGYVLFSNKNKKRNIERAS

>D9O40_21630
MKREWGGIYPAIMVPLNDDYSINEKEFNNYIDWLLKYA

>D9O40_21635
MDPLHYDLSVNKNHIFHLSNQHMVLIVL

>D9O40_21640
MKNISIVDVAKRAGVSVTTVSRVINNVDYPIASKTRERVLKAIDELQYTPNSAAQGLKRKFSNIIGLIVRDISDSYFGEIANGVTNRASQLGYLSFVCNTGRNPEDELKYHDILWQHRVKGIIMAGGGLDQPNYKRKLENQLVRHAKYGLKIVSLAPQGIEIPYVKINDFKAGKKITEYMIERGHTKIGFIGGPEKVFTSIERLEGFKSALGDAGIKYDKKYIGTSDFSQKGGYEACSLLISQIKDLTAICCANDNIAIGAMSAIREHGFSIPKDISIISIGDMKEARYTNPSLTTLQIPHYEMGQMAVDAITQWKDKVEITLNTSILERDSVRVIDY

>D9O40_21645
MVRGDISNIISSLKHIEDSDRTSTFYNLKSGNKSIEKSRKVNYENNIEKKEEIAFSTFIVGVCVLIKIIMDVSVAGISAMGNINL

>D9O40_21650
MLGATEELLYDGAKPMLLVDDVDNKKFLYQLIIEMYKELPAPKVKKRK

>D9O40_21655
MKICFFGGEEIGGLGSKHYIKNLSPDDKKNIKAVINVDSVAQRDGSKPYIFTVNG

>D9O40_21660
MQTFSLSNRTENDKTGVNNSQNLIATRNNKSNYNKGIIVICAHYDCERNSVGANDNASGVSVVRRQLDY

>D9O40_21665
MNKGKCIKKQNILYLNIFVVSILCYFYALSFTTLELWKQVLIILAATLIILVVEFSIFYAFKNHIKHKKFN

>D9O40_21675
MDQLIKTIDFIFNGKLKLLSRFSATGVINTIIDFAVFTLCQSVFGLHYTISQVIGYSFGVVNSFIFNKKWTFEYKSSGKKVIREVSQFVIVNLISLISTLVFMKFLINDFNLNVYLSKIIVTLIAQVINFLLYKIWVFN

>D9O40_21680
MKKLKFTKERFALCIILVISAILNFANLTIEGYANSYYAAGVKSMLMNFKNFFFVSFDPAGFVSIDKPPLGFWIQTISAKIFGFSGWSILFPEALAGVISVGILYYIVKRSFGEIAGLISALCLSITPVFVATSRNNTIDNLLIVTLLFACLFLSKAAEKGKLKYLIISLVLVGLGFNIKMLQAYMIAPALYITYLISSAVPVKQRIKHLIISTLILGVISLSWAVAVDLVPSKNRPFVGSSTNNTVTELIFGHNGLERLSSTNGGMGGAPSGKVGNFEFKEFRSNFSKNQANSQSRNNNAPSAMIPPQNSKNSVQSPQGGPGGQNTQGNFKNQGGGPGGGGPGGLNGLSGSFGGQTTAGITRLFSKNVLSDQIVWFLPLAIFGLAAAVIVEKLKFPFDNKKKLGLTLWTLWLVPEFIYFSYTKGLFHPYYLSMLAPPIAALCGIGLTSMWKLYKEGGVKSWIMPAAFIAEGLVHLLMLSYFTTISTTIKSIIIAAIILCFASSALLIIYRLVKKGNLDQGNNGGFAKIFGALALVGILVTPAVGSAAAITHRLSSLPAAGLELLSSGESGNFMMMGGQNSSRNSKLIKFLESHTSNEKYALVVSGSASAEDIIIESGKSVMALGGFSGSDKILSLSEFKQMVKKGEVRYVLTGGMGGRDSQDIMNWIQKNGKAVSTTEWKDTTSSQAQKSSNSNNNTTNNKKDNSSKENSSFQHQGMGGMDNETLYDLKGTVK

>D9O40_21685
MKKLICVKDVETAEKQGQKVVYINCDTIVTPSAKDAARNSGIEFSTETPVPEVKKSCEVEVPCEVKGSCETKASELEKVFENGIDSEVIYKVFKVMMEKGLLNGVIDLITNKKPYLAETDAIGLKIVRGSSVKYEALDTGNPDDKVFYQEIINADDGSSMNAGFITIEDCKFDWETECQELYYVIEGTLTVTVDNKVYTAHPGDSVFFPKGAKIAFGSPDK

>D9O40_21690
MSQAIGMVEFTSIARGIYAADQMVKTSEVEIVTAGSSCPGKYIAIVQGDVAAVEDSVSVGVRFAEEFLVDSIVIPNVNPAVFPAITGATMPDEVQALGIMESFSLSTMVIAADAILKSAELQPIELRLGNGLGGKSFFTFTGDVAAVETGVETGKAIAEEKGLLVNAEVIPSPSERLLASLF

>D9O40_21695
MSILDMVREAGVIGAGGAGFPTHAKLASKAEYILLNGAECEPLLRVDQQLMRMFPDEIIKGFESAGKLVGANKALIGIKGKHKEVISILRNRIEELQVGDFIEVKEIPDIYPAGDEQVLVHELTGRVVPEMGIPISVGCVVVNAETALNIYHASMGVPVTEKYITVAGDIPKRLTVKVPVGTPVIDVLKLSGIENFDDYTVIDGGPMMGPVKSDVDGYVTKKNKGFVILKKDHPLIRKKSVSIEQAKRVNRSSCEQCRMCTDMCPRYLLGHSTQPHKMMRALNYALKNVEEQKIAQLCCQCNLCELFSCPAGLYPKSANLYFKGKLAEQNIKYKPMKSEFTTRKSREYRLVPSKRLIARLGLHDFDRPAPMTEVQVNPEEVHIATRQHVGAPAVPIVNVGDHVELGQQIGKIPEGSLSAAIHASISGTVVECGNDFIVIRRG

>D9O40_21700
MLIARLIDNVWATRKAESLNGLKFMLAEVIGGTGAGQHLVVADIISAGIGDRVLVSTGSSARKMLDECEDIPVDAVVVGIIDEDCNVE

>D9O40_21720
MKILIVCSKKSGKLPENEFYTKTDSRFAGAKFIPHIKNYKEACTVCGKKCVWCRGKYELNFKESVSEVIELPDIYELFEDNPLKYLPQKFKKHDAAVIIGVHEDIIIELPKIIAESGGKAMIVPCESGSWVSKWTREKLIEECEKYNLQYAFPKPFCTLKYGKFPLINEFIDFFKIGKPKFRLYVNDEDVIEKAEVIISAPCGNGYNIARHLLGKKLGEEAKKSVAKFWHSYPCLGDMHVDPELGDTPLHISGYTHYAALENAQIIRNSKV

>D9O40_21725
MTKYINLHKNYTSNRENYQLKLPLNIEYMIPDDDSVRLLSQFIEEMDLTDLYSTYSRIRGNQATPRQMLKIVLYSYMNHNYSSRLMEKSCKRDVNFMYLLEGSPVPDHSTFARFRSIHFAPCSETIMAEMSNFLYEIGEISGDAIFIDGTKIESCANKYTFVWKKSVSKNLARLLSKLADFVAECEEMYGLKLIYENRVKIKHVKKLRKKLYALKHDENIEFVHGCGKRKTPIQRSIETLEEYLNKLKEYTQKLYICGKRSSYSKTDKDATFMRMKEDAMKNGQLKPAYNVQHGVDSEYIVWLTIGAKPTDTTTLIPFIKSMENFLYFKYFKITADAGYESEENYVYVKENMQLSFIKPANYEISKTRKYKNDISRIENMDYNEFGDYYICENNKKLTVNRIIKRKSKTGYVSEKTIYTCEDCNNCKYKSKCIKGHNCKIPLEERVKNLETSKLFNMLRKENLERIVSEEGCELRMNRSIQAEGSFAEIKQDMGFRRYLSKGKKNILAENVLLAMAHNVNKLHNKIQSARTGTHLFQLEKSA

>D9O40_21730
FNKKKLKFTSKLYIENLVNFLKKFIFFLLITNKKRCKLNALGDEKILAEAFSLKMVPGACMVEENIGTNAMSMVIRSKLPVQISGDDHFINAYHKWTCSAAPIKDNKGKLIGVLSLTGYIEFVHSHTLGMVIAASNAIEEMLKVKEYNKIKNMNYKYMENIFNSSPIAIVSSDINGKIKICNKKAQDMFSITNSKLQTYKIEDIIENWNDIKTLICLGQDDLKETNVAVVKNGTRYQLTTSCIYNCEDDNVEIVYVFDKIEKVKKRSNGQAYYTFDNIIGQDESFTKVINYAKKISDSKSTILVMGESGTGKEVFAQSIHNYSSRVDGPFIALNCGAIPKQLIESELFGYEEGAFTGAKKGGNLGKFKLADGGTIMLDEIGEMPLDMQTKLLRVVQEGVITTIGSSKPIPVDVRIIAATNRDLKKEVEAGRFRKDLYYRLNVLPLFLPTLKERKKDIPLLIQYFVKNISQKLNKKEPVISKEYLKKMIKYNWPGNIRELENLVELIVNTGSIPADYFTEEDCDNEVLVDVSDDCLKLDYVEKEHVIKVLKKFKWNITHSAEALGIRRTNLYSTIDKYNI

>D9O40_21735
LWAQNVISLGKQFTKIKNAIQGKGSVENLCIKECTAINFSNYSLDLDDCFEITEFHMQLKKGRDIIILHRLRCALREIEPFILEAYEDSEDEDALCSDTIGKINQIINALSQMICSIFGGTKCQRKI

>D9O40_21740
MSEKNLTFKFCDQLVKDFEHVVKHPIVGKSSVYYTGVDLGTACVVLAVVDENYKPVAGAYKYADVVRDGMVVDYIGAINIVREMKHEIEEKLGTELIYGAAAIPPGTDDLDSGAVKNVVQAAGFELTSVLDEPTAANKVLRIKNGAVVDIGGGTTGISILKDGKVVYIADEPTGGTQFSLVVSGAYKMPFAEAELYKRNPENHKDLLPVLKPVVEKIASIINQHIKGYDVQEISLVGGTCCLTGIETIIEKKTGIFTHKPKNPMFVTPLGIALSCTQESI

>D9O40_21745
MEFRTIKSPSKGTIDMLMRRMGANVNKDSICVDAVGLVQGKMLDMIYAADIAEKAVGVTVEDIKGSCPQNMIMIAIFGDTSSVESAIQEIKRNVKKEKDIC

>D9O40_21750
MLIARLIDNVWATRKAESLNGLKFMLAEVIGGTGAGQHLVV

>D9O40_21760
MENFDKDLRSIQEARDLARLGKIAADQIADYTEEQIDKILCNMVRVAEENAVCLGKMAAEETGFGKAEDKAYKNHMAATTVYNYIKDMKTIGVIKEDKSEGVIEFAEPVGLLMGIVPSTNPTSTVIYKSIIAIKSRNAIVFSPHPAALKCSTKAIELMRDAAVAAGAPANVIGGIVTPSIQATNELMKAKEVAMIIATGGPGMVKAAYSSGTPAIGVGAGNSPSYIERTADVHQSVKDIIASKSFDYGTICASEQSVIAEECNHDEIVAEFKKQGGYFMTAEETAKVCSVLFKPGTHSMSAKFVGRAPQVIAEAAGFTVPEGTKVLIGEQGGVGNGYPLSYEKLTTVLAFYTVKDWHEACELSIRLLQNGLGHTMNIHTNDRDLVMKFAKKPASRILVNTGGSQGGTGASTGLAPAFTLGCGTWGGSSVS

>D9O40_21765
VDKMVLDYGLEKAIEILSKFKVIELRNLARKYKNFGIKGRSISKADKKLLLIEFKKYYGHN

>D9O40_21770
GCILNALGDEKILEEAFSLKMVPGAFMNEENIGTNAMSVVIKSKLPVQISGDDHFINAYHKWTCSAAPIKDNKGKLIGVLNLTGYIEFVHSHTLGMVIAASNAIEEMLKVEEYNKIQNMNYKHIKNIFNSSPVAIITSDINGKIKICNKKAQDMFGIRGNKLETNNMEDIIENWNDIKTSMYLGESDSKETIMVSLRNKIQYQVTTSSIYNCDDDNNIEIVYVFEKAKKVNKKNNGQAYYTFGKIMGQDENFTKVINYAKKISDSKSTILIMGESGTGKEVFAQSIHNYSSRVDGPFVALNCGAIPKQLIESELFGYEEGAFTGAKKGGNLGKFELADGGTIMLDEIGEMPLDMQTKLLRVVQEGVITRIGSSKSIPVDVRIIAVTNRDLKKEVEAGRFRKDLYYRLNVLPLFLPPLRERKKDIPLLIQYFVKNIAQKLNKKEPVISEEYLKKMINYNWPGNIRELE

>D9O40_21775
MVELLDNKVIDGCVTQHFDFPIGVSTVGKVTTPGLGKEMIIATTTGTTATHRVEGMIKNTINGIAVAKACGIKDPKIGILNVDGARGVERALKELQSRGYKFSFSESLRADGGSVMRGNDLLAGTPDVMVCDSLTGNLLVKIFASFTTGGNYETTGYGYGPGIGEGYDKIINIVSRASGAPLICEALKYCALSAKNKLLQLADVEYKNANAAGLKEIIGKILEKEKPAAAVEEVKIPPKKVVTYGIPGIDILELEDACKSLWKEGIYSESGMGCTGPIVLVAEDEADKAINALKKNGFK

>D9O40_21780
MKYDALGMIETKGLVGSIEAADAMVKAANVYLIGKEHVGGGLVTVMVRGDVGAVKAATDAGAAAAQRVGELVSVHVIPRPHVEVETILPKTNLKEDEK

>D9O40_21785
MKSDALGMIETKGLVGSIEAADAMVKAANVNLIGKEHVGGGLVTVMVRGDVGAVKAATDAGAAAAQRVGELVSVHVIPRPHVEVETILPKTGLKED

>D9O40_21790
LGPLRSKTQVEILRGDSFKLGVAPEVRMSGDLHGTPGIAIIGSKGSVQIKEGVIVAQRHIHMTPADAQHFGVHDGQTVSIKVDGPRGGIYNNVAIRANDTSALECHIDTEEANAMCVGNSSKITIVK

>D9O40_21795
MKKLICAKDVETAERQGQKVVYIGCEAIITPSAKDIAKSYGIEFSTEKQVLEAKSSCEVETPCETKTSELEKVFENGIDSEVIYKVFKIMMKKGLLNGVIDLITNKKPYLAETDSIGLKIVRGSSVKYEALDTGNPDDKVFYQEIINADDGSSMNAGFITIESCKFDWETECQELYYVIEGTLTVTVDNKVYTAHPGDSVFFPKGAKIAFGSPDK

>D9O40_21800
MLIARLIDNVWATRKAESLNGLKFMLAEVIGGTGAGQHLVVADIISAGIGDRVLVSTGSSARKMLDECEDIPVDAVVVGIIDEDCNVE

>D9O40_21825
MDKYEAVIKLLLEAVQGSQSSTETKQDTNEIPVGVSNRHIHLSQADFNILFGEGYQVTKIKDLAQPGQYACKETVTVCGPKGAIEKIRILGPLRSKTQVEILRGDSFKLGVAPEVRMSGDLHGTPGIAIIG

>D9O40_21830
AKKPASRILVNTGGSQGGTGASTGLAPAFTLGCGTWGGSSVSENVTPLHLINIKRVAYGLKDCTTLAADDTTFNHPELCGSKNDLGFCATSPAEFAAKSNCDSTAADTTDNDKLARLVSELVAAMKGAN

>D9O40_21835
MDKYEAVIKLLLEVVQGSQSSKETKQDTNEIPVGVSNRHIHLSQADFNILFGEGYQVTKIKDLAQPGQYACKETVTVCGPKGAIEKIRILGPLRSKTQVEILRGDSFKLGVAPEVRMSGDLHGTPGIAIIG

>D9O40_21840
AKKPASRILVNTGGSQGGTGASTGLAPAFTLGCGTWGGSSVSENVTPLHLINIKRVAYGLKDCTTLAADDTTFNHCATSPAEFAAKSNCASNAADTTDNDKLARLVSELVAAMKGAN

>D9O40_21845
MSKKIISNNKNKNVKIIEKNKKNDVNIYFNLIEREKEQAFFVSNSIKEIINKGKYKYSHIAVFYRTNLESRSIIDAFLKYNIKFKLLDGQYNFYEHFICKDLIAYLKLAVNMCDKNSFMRIINKPFRYIGKVNIKKVIDNRIRENCFDILRQVGDLPIFQIKTITVLKKNNRK

msu.edu Reference: A catalog of the diversity and ubiquity of bacterial microcompartments
Sutter M, Melnicki MR, Schulz F, Woyke T & Kerfeld CA; Nature Communications 12, 3809 (2021)
© www.kerfeldlab.org, 2021