| BMC type | HMM name | HMM information | number of sequences |
| PVM | HMM02441_01.PVM | Flavoprotein | 177 |
| PVM | HMM02866_1_pvmeut.PVM | Lactate/malate dehydrogenase, alpha/beta C-terminal domain | 170 |
| PVM | HMMPduS_1_all.PVM | PduS / Complex 51K/RnfC/SLBB domain | 22 |
| PVM | HMMacetkin_1.PVM | Propionate kinase | 279 |
| PVM | HMMalddh_1_eutpdugrm.PVM | Aldehyde dehydrogenase | 283 |
| PVM | HMMaldol_2_pvm1.PVM | Class II Aldolase | 186 |
| PVM | HMMaldol_4_pvm2.PVM | Class II Aldolase | 73 |
| PVM | HMMnopfamclust22_1_pvm.PVM | no pfam protein | 71 |
| PVM | HMMnopfamclust3_1.PVM | Short-chain dehydrogenase/reductase | 25 |
| PVM | HMMptac_2_mix.PVM | Phosphotransacylase | 265 |
| PVM | HMMreg00455_1_GRM5.PVM | potential regulator | 23 |
| PVM | HMMreg00455_2_PVM.PVM | potential regulator | 184 |
| PVM | HMMreg08220_2_PVM.PVM | potential regulator | 34 |
| PVM | H_blurple.PVM | BMC shell protein, BMC-H type | 94 |
| PVM | H_purplishGrey.PVM | BMC shell protein, BMC-H type | 281 |
| PVM | H_vividBlue.PVM | BMC shell protein, BMC-H type | 273 |
| PVM | P_adobe.PVM | BMC shell protein, BMC-P type | 272 |
| PVM | P_dirtyPink.PVM | BMC shell protein, BMC-P type | 277 |
| PVM | P_slate.PVM | BMC shell protein, BMC-P type | 272 |
| PVM | Ts_mud.PVM | BMC shell protein, BMC-Ts type | 36 |
Reference:
BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
© www.kerfeldlab.org, 2022