BMC type: PDU1F

(complete list of loci) (list of all HMMs in BMC type)

Example locus:

Organism: Fusobacterium periodonticum 1_1_41FAA. Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

     HMPREF0400_01460
            HMPREF0400_01461 HMM10114PocR_2_grm PDU1F (HMM details)
                 HMPREF0400_01462 HMMreg00072_2_pdugrm PDU1F (HMM details)
                               HMPREF0400_01463 HMMreg00072_4_pdu1d PDU1F (HMM details)
                                       HMPREF0400_01464 HMM00465alcdh_3_mix PDU1F (HMM details)
                                             HMPREF0400_01465 Tsp_lichen PDU1F (HMM details)
                                                          HMPREF0400_01466 HMMpropdeh1_1_pdu PDU1F (HMM details)
                                                               HMPREF0400_01467 HMMpropdeh3_1_pdu PDU1F (HMM details)
                                                                   HMPREF0400_01468 HMMpropdeh2_1_pdu PDU1F (HMM details)
                                                                                 HMPREF0400_01469 HMM08841dhact_1_pdu PDU1F (HMM details)
                                                                                    HMPREF0400_01470 HMMpropdeh3_2_pdusml PDU1F (HMM details)
                                                                                       HMPREF0400_01471 H_tangerine PDU1F (HMM details)
                                                                                         HMPREF0400_01472 H_tan PDU1F (HMM details)
                                                                                             HMPREF0400_01473 HMMptac_2_mix PDU1F (HMM details)
                                                                                                  HMPREF0400_01474 HMM02441_04 PDU1F (HMM details)
                                                                                                    HMPREF0400_01475 P_khaki PDU1F (HMM details)
                                                                                                           HMPREF0400_01476 HMM03928Haemd_1_pdu PDU1F (HMM details)
                                                                                                                      HMPREF0400_01477 HMMalddh_1_eutpdugrm PDU1F (HMM details)
                                                                                                                           HMPREF0400_01478
                                                                                                                         ...
                                                                                                                                        HMPREF0400_01843
                                                                                                                                                HMPREF0400_01844 HMM00465alcdh_3_mix EUT2F (HMM details)
                                                                                                                                                        HMPREF0400_01845
                                                                                                                                                           HMPREF0400_01846 HMM10662PduV_1_mix EUT2F (HMM details)
                                                                                                                                                             HMPREF0400_01847 Hp_euts_plumPurple EUT2F (HMM details)
                                                                                                                                                                   HMPREF0400_01848
                                                                                                                                                                         HMPREF0400_01849

BMC shell protein types:

BMC-H (map on tree)

       H_tangerine
       H_tan

BMC-Hp (map on tree)

       Hp_euts_plumPurple

BMC-P (map on tree)

       P_khaki

BMC-Tsp (map on tree)

       Tsp_lichen