BMC type: PDU1E

(complete list of loci) (list of all HMMs in BMC type)

Example locus:

Organism: Veillonella sp. AF42-16. Bacteria; Firmicutes; Negativicutes; Veillonellales; Veillonellaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

    DW053_05195
           DW053_05200
                       DW053_05210 HMMalddh_1_eutpdugrm PDU1E (HMM details)
                         DW053_05215 P_murkyGreen PDU1E (HMM details)
                             DW053_05220 HMM15953pduput_2_pdu1c PDU1E (HMM details)
                                    DW053_05225 HMM06723EutJMreB_1_grm PDU1E (HMM details)
                                         DW053_05230 HMMptac_2_mix PDU1E (HMM details)
                                           DW053_05235 H_fuchsia PDU1E (HMM details)
                                              DW053_05240 H_driedBlood PDU1E (HMM details)
                                                     DW053_05245 Tsp_sunYellow PDU1E (HMM details)
                                                       DW053_05250 H_fuchsia PDU1E (HMM details)
                                                                DW053_05255
                                                                   DW053_05260 HMM10662PduV_1_mix PDU1E (HMM details)
                                                                      DW053_05265 Hp_euts_fadedPurple PDU1E (HMM details)
                                                                            DW053_05270
                                                                                     DW053_05275 HMM01923cobtr_1_pdu PDU1E (HMM details)
                                                                                        DW053_05280 HMMpropdeh3_2_pdusml PDU1E (HMM details)
                                                                                                        DW053_05285 HMM08841dhact_1_pdu PDU1E (HMM details)
                                                                                                            DW053_05290 HMMpropdeh2_1_pdu PDU1E (HMM details)
                                                                                                                  DW053_05295 HMMpropdeh3_1_pdu PDU1E (HMM details)
                                                                                                                                 DW053_05300 HMMpropdeh1_1_pdu PDU1E (HMM details)
                                                                                                                                       DW053_05305 Tsp_sunYellow PDU1E (HMM details)
                                                                                                                                               DW053_05310 HMM10114PocR_1_pdu1 PDU1E (HMM details)
                                                                                                                                                      DW053_05315
                                                                                                                                                                 DW053_05320
                                                                                                                                                                          DW053_05325

BMC shell protein types:

BMC-H (map on tree)

       2x H_fuchsia
       H_driedBlood

BMC-Hp (map on tree)

       Hp_euts_fadedPurple

BMC-P (map on tree)

       P_murkyGreen

BMC-Tsp (map on tree)

       2x Tsp_sunYellow