| BMC type | HMM name | HMM information | number of sequences |
| PDU1D | HMM00465alcdh_3_mix.PDU1D | Alcohol dehydrogenase | 96 |
| PDU1D | HMM00465alcdh_4_pdu.PDU1D | Alcohol dehydrogenase | 34 |
| PDU1D | HMM01923cobtr_1_pdu.PDU1D | Cobalamin adenosyltransferase | 156 |
| PDU1D | HMM01923cobtr_4_eut2.PDU1D | Cobalamin adenosyltransferase | 14 |
| PDU1D | HMM02441_04.PDU1D | Flavoprotein | 160 |
| PDU1D | HMM03358reduct_2_grm5.PDU1D | NADPH-dependent FMN reductase | 10 |
| PDU1D | HMM03928Haemd_1_pdu.PDU1D | Haem-degrading protein | 13 |
| PDU1D | HMM03928Haemd_3_pdu.PDU1D | Haem-degrading protein | 10 |
| PDU1D | HMM06723EutJMreB_1_grm.PDU1D | MreB/FtsZ homolog, ATP binding in cleft between two domains | 151 |
| PDU1D | HMM08841dhact_1_pdu.PDU1D | Diol dehydratase reactivase ATPase-like domain large subunit | 174 |
| PDU1D | HMM10114PocR_2_grm.PDU1D | Sensory domain found in PocR | 135 |
| PDU1D | HMM10662PduV_1_mix.PDU1D | Filament interaction (putative) | 123 |
| PDU1D | HMMPduS_1_all.PDU1D | PduS / Complex 51K/RnfC/SLBB domain | 131 |
| PDU1D | HMMacetkin_1.PDU1D | Propionate kinase | 29 |
| PDU1D | HMMalddh_1_eutpdugrm.PDU1D | Aldehyde dehydrogenase | 181 |
| PDU1D | HMMpropdeh1_1_pdu.PDU1D | Diol dehydratase large subunit | 180 |
| PDU1D | HMMpropdeh2_1_pdu.PDU1D | Diol dehydratase small subunit | 174 |
| PDU1D | HMMpropdeh3_1_pdu.PDU1D | Diol dehydratase reactivation small subunit | 174 |
| PDU1D | HMMpropdeh3_2_pdusml.PDU1D | Diol dehydratase reactivation small subunit | 170 |
| PDU1D | HMMptac_3_eut2.PDU1D | Phosphotransacylase | 148 |
| PDU1D | HMMreg00072_4_pdu1d.PDU1D | potential regulator | 54 |
| PDU1D | HMMreg00072_5_grm1.PDU1D | potential regulator | 10 |
| PDU1D | HMMreg12833_2_PDU.PDU1D | potential regulator | 11 |
| PDU1D | HMMreg12833_3_GRM3.PDU1D | potential regulator | 60 |
| PDU1D | H_fuchsia.PDU1D | BMC shell protein, BMC-H type | 92 |
| PDU1D | H_pumpkin.PDU1D | BMC shell protein, BMC-H type | 164 |
| PDU1D | H_robinEggBlue.PDU1D | BMC shell protein, BMC-H type | 119 |
| PDU1D | H_royalBlue.PDU1D | BMC shell protein, BMC-H type | 28 |
| PDU1D | H_tan.PDU1D | BMC shell protein, BMC-H type | 45 |
| PDU1D | H_tangerine.PDU1D | BMC shell protein, BMC-H type | 19 |
| PDU1D | Hp_euts_fadedPurple.PDU1D | BMC shell protein, BMC-Hp type | 18 |
| PDU1D | Hp_euts_iceBlue.PDU1D | BMC shell protein, BMC-Hp type | 12 |
| PDU1D | Hp_euts_plumPurple.PDU1D | BMC shell protein, BMC-Hp type | 49 |
| PDU1D | Hp_euts_steel.PDU1D | BMC shell protein, BMC-Hp type | 34 |
| PDU1D | Hp_euts_violetPink.PDU1D | BMC shell protein, BMC-Hp type | 12 |
| PDU1D | Hp_grpu_ickyGreen.PDU1D | BMC shell protein, BMC-Hp type | 16 |
| PDU1D | P_clearBlue.PDU1D | BMC shell protein, BMC-P type | 42 |
| PDU1D | P_fadedGreen.PDU1D | BMC shell protein, BMC-P type | 15 |
| PDU1D | P_khaki.PDU1D | BMC shell protein, BMC-P type | 44 |
| PDU1D | P_moss.PDU1D | BMC shell protein, BMC-P type | 12 |
| PDU1D | P_stone.PDU1D | BMC shell protein, BMC-P type | 53 |
| PDU1D | Ts_barbiePink.PDU1D | BMC shell protein, BMC-Ts type | 11 |
| PDU1D | Ts_grape.PDU1D | BMC shell protein, BMC-Ts type | 25 |
| PDU1D | Ts_ochre.PDU1D | BMC shell protein, BMC-Ts type | 10 |
| PDU1D | Ts_paleMagenta.PDU1D | BMC shell protein, BMC-Ts type | 61 |
| PDU1D | Ts_sandstone.PDU1D | BMC shell protein, BMC-Ts type | 12 |
| PDU1D | Tsp_chartreuse.PDU1D | BMC shell protein, BMC-Tsp type | 24 |
| PDU1D | Tsp_darkGrassGreen.PDU1D | BMC shell protein, BMC-Tsp type | 35 |
| PDU1D | Tsp_lichen.PDU1D | BMC shell protein, BMC-Tsp type | 72 |
| PDU1D | Tsp_pistachio.PDU1D | BMC shell protein, BMC-Tsp type | 18 |
| PDU1D | Tsp_scarlet.PDU1D | BMC shell protein, BMC-Tsp type | 40 |
| PDU1D | Tsp_turquoiseBlue.PDU1D | BMC shell protein, BMC-Tsp type | 57 |
Reference:
BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
© www.kerfeldlab.org, 2022