Home
BMC loci
Shell proteins
Help
Locus database
News
Citations
Contact
BMC type:
MIC4
(
complete list of loci
) (
list of all HMMs in BMC type
)
Example locus:
Organism: Ignavibacteriales bacterium. Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales.
BMC-P
BMC-H/Hp
BMC-Ts/sp
BMC-Tdp
AldDh
PTAC
signature enzyme
AlcDh
regulator
others
no assignment
C4539_07970
C4539_07975
C4539_07980 HMMacetkin_1 MIC4 (
HMM details
)
C4539_07985 HMMaldol_1_grm MIC4 (
HMM details
)
C4539_07990 Ts_darkBlue MIC4 (
HMM details
)
C4539_07995 HMMPduS_1_all MIC4 (
HMM details
)
C4539_08000 P_greyBlue MIC4 (
HMM details
)
C4539_08005 P_orange MIC4 (
HMM details
)
C4539_08010 P_paleGreen MIC4 (
HMM details
)
C4539_08015 H_camo MIC4 (
HMM details
)
C4539_08020 HMMalddh_1_eutpdugrm MIC4 (
HMM details
)
C4539_08025 H_camo MIC4 (
HMM details
)
C4539_08030 H_mediumGrey MIC4 (
HMM details
)
C4539_08035 HMM02441_04 BUF1 (
HMM details
)
C4539_08040 P_viridian MIC4 (
HMM details
)
C4539_08045 HMMptac_3_eut2 MIC4 (
HMM details
)
C4539_08050 HMMreg00455_1_GRM5 MIC4 (
HMM details
)
C4539_08055
C4539_08060
BMC shell protein types:
BMC-H (
map on tree
)
2x H_camo
H_mediumGrey
BMC-P (
map on tree
)
P_viridian
P_paleGreen
P_orange
P_greyBlue
BMC-Ts (
map on tree
)
Ts_darkBlue
Reference:
BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data