BMC type: GRM5

(complete list of loci) (list of all HMMs in BMC type)

Example locus:

Organism: Ruminococcus sp. TF10-6. Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

     DXD07_03105
                    DXD07_03110 HMMgre_1_grms GRM5 (HMM details)
                        DXD07_03115 HMMgreae_1_grms GRM5 (HMM details)
                            DXD07_03120 HMMaldol_1_grm GRM5 (HMM details)
                               DXD07_03125 HMM03928Haemd_2_grm GRM5 (HMM details)
                                       DXD07_03130 HMMalddh_1_eutpdugrm GRM5 (HMM details)
                                              DXD07_03135 HMM00107alcdh_1_grm5 GRM5like (HMM details)
                                                DXD07_03140 H_darkBlueGreen GRM5 (HMM details)
                                                 DXD07_03145 H_cyan GRM5 (HMM details)
                                                  DXD07_03150 H_evergreen GRM5 (HMM details)
                                                   DXD07_03155 H_cyan GRM5 (HMM details)
                                                      DXD07_03160 HMMptac_3_eut2 GRM5 (HMM details)
                                                       DXD07_03165 P_darkishBlue GRM5 (HMM details)
                                                              DXD07_03170 HMMPduS_1_all GRM5 (HMM details)
                                                                 DXD07_03175 Ts_berry GRM5 (HMM details)
                                                                     DXD07_03180 HMMreg00455_1_GRM5 GRM5 (HMM details)
                                                                           DXD07_03185 HMM00465alcdh_3_mix GRM5like (HMM details)
                                                                               DXD07_03190
                                                                                              DXD07_03195
                                                                                            ...
                                                                                                     DXD07_03050
                                                                                                         DXD07_03055 Tsp_chartreuse GRM5like (HMM details)
                                                                                                             DXD07_03060 HMMnopfamclust3_1 GRM5 (HMM details)
                                                                                                                 DXD07_03065
                                                                                                                      DXD07_03070 HMMreg12833_4_GRM5 GRM5 (HMM details)
                                                                                                                    ...
                                                                                                                            DXD07_06465
                                                                                                                                DXD07_06470
                                                                                                                                 DXD07_06475 H_olive GRM5 (HMM details)
                                                                                                                                  DXD07_06480 H_darkBlueGreen GRM5 (HMM details)
                                                                                                                                     DXD07_06485
                                                                                                                                          DXD07_06490
                                                                                                                                        ...
                                                                                                                                            DXD07_06575
                                                                                                                                                DXD07_06580
                                                                                                                                                   DXD07_06585 HMM10662PduV_1_mix GRM5 (HMM details)
                                                                                                                                                     DXD07_06590 Hp_euts_frenchBlue GRM5like (HMM details)
                                                                                                                                                       DXD07_06595 Hp_euts_bluegreen GRM5like (HMM details)
                                                                                                                                                              DXD07_06600
                                                                                                                                                                    DXD07_06605

BMC shell protein types:

BMC-H (map on tree)

       2x H_darkBlueGreen
       H_evergreen
       H_olive
       2x H_cyan

BMC-Hp (map on tree)

       Hp_euts_frenchBlue
       Hp_euts_bluegreen

BMC-P (map on tree)

       P_darkishBlue

BMC-Ts (map on tree)

       Ts_berry

BMC-Tsp (map on tree)

       Tsp_chartreuse