BMC type: FRAG5

(complete list of loci) (list of all HMMs in BMC type)

Example locus:

Organism: Planctomycetes bacterium. Bacteria; Planctomycetes.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

            D6731_04250
                 D6731_04255
                  D6731_04260
                     D6731_04265 Ts_drab FRAG5 (HMM details)
                       D6731_04270 HMM01842act_1_acimic3 MIC3 (HMM details)
                               D6731_04275
                                     D6731_04280
                                   ...
                                        D6731_09265
                                          D6731_09270
                                            D6731_09275 H_fuchsia FRAG5 (HMM details)
                                                     D6731_09280 HMMalddh_2_egra FRAG5 (HMM details)
                                                      D6731_09285 H_fuchsia FRAG8 (HMM details)
                                                         D6731_09290 Tdp_swampGreen FRAG5 (HMM details)
                                                          D6731_09295
                                                                 D6731_09300
                                                               ...
                                                                             D6731_10690
                                                                                     D6731_10695
                                                                                      D6731_10700 P_viridian FRAG8 (HMM details)
                                                                                       D6731_10705
                                                                                                     D6731_10710
                                                                                                   ...
                                                                                                      D6731_15520
                                                                                                           D6731_15525
                                                                                                                D6731_15530 HMMspu01791_1_spu FRAG5 (HMM details)
                                                                                                                  D6731_15535 P_grey FRAG5 (HMM details)
                                                                                                                   D6731_15540 P_orange FRAG3 (HMM details)
                                                                                                                      D6731_15545 HMMspu02502_1_spu SPU3 (HMM details)
                                                                                                                            D6731_15550
                                                                                                                                    D6731_15555
                                                                                                                                  ...
                                                                                                                                         D6731_19330
                                                                                                                                                              D6731_19335
                                                                                                                                                                  D6731_19340 Tdp_swampGreen FRAG5 (HMM details)
                                                                                                                                                                    D6731_19345
                                                                                                                                                                       D6731_19350

BMC shell protein types:

BMC-H (map on tree)

       2x H_fuchsia

BMC-P (map on tree)

       P_grey
       P_viridian
       P_orange

BMC-Tdp (map on tree)

       2x Tdp_swampGreen

BMC-Ts (map on tree)

       Ts_drab