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BMC loci
Shell proteins
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BMC type:
EUT2H
(
complete list of loci
) (
list of all HMMs in BMC type
)
Example locus:
Organism: Lysinibacillus sphaericus OT4b.31. Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae;
BMC-P
BMC-H/Hp
BMC-Ts/sp
BMC-Tdp
AldDh
PTAC
signature enzyme
AlcDh
regulator
others
no assignment
H131_09938
H131_09943 HMMreg07568_1_eut2 EUT2H (
HMM details
)
H131_09948 HMMreg00072_1_eut2 EUT2H (
HMM details
)
H131_09953 HMMtpEuth_1_eut EUT2H (
HMM details
)
H131_09958 Hp_euts_wineRed EUT2H (
HMM details
)
H131_09963 HMM10662PduV_1_mix EUT2H (
HMM details
)
H131_09968 HMM06277EutA_1_eut EUT2H (
HMM details
)
H131_09973 HMMetlyEutB_2_EUT2 EUT2H (
HMM details
)
H131_09978 HMMetlyEutC_3_eut2 EUT2H (
HMM details
)
H131_09983 Tsp_orangePink EUT2H (
HMM details
)
H131_09988 HMMalddh_2_egra EUT2H (
HMM details
)
H131_09993 H_fuchsia EUT2H (
HMM details
)
H131_09998 HMMptac_3_eut2 EUT2H (
HMM details
)
H131_10003 HMMptac_3_eut2 EUT2H (
HMM details
)
H131_10008 P_pastelBlue EUT2H (
HMM details
)
H131_10013 H_lavender EUT2H (
HMM details
)
H131_10018 HMM02866_1_pvmeut EUT2H (
HMM details
)
H131_10023 HMMreg13411_1_GRM1 EUT2H (
HMM details
)
H131_10028
BMC shell protein types:
BMC-H (
map on tree
)
H_fuchsia
H_lavender
BMC-Hp (
map on tree
)
Hp_euts_wineRed
BMC-P (
map on tree
)
P_pastelBlue
BMC-Tsp (
map on tree
)
Tsp_orangePink
Reference:
BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data