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BMC loci
Shell proteins
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BMC type:
EUT2E
(
complete list of loci
) (
list of all HMMs in BMC type
)
Example locus:
Organism: Brevibacillus sp. NRRL NRS-603. Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae;
BMC-P
BMC-H/Hp
BMC-Ts/sp
BMC-Tdp
AldDh
PTAC
signature enzyme
AlcDh
regulator
others
no assignment
C7R94_06480
C7R94_06485 HMMreg00126_1_mix EUT2E (
HMM details
)
C7R94_06490 Tsp_orangePink EUT2E (
HMM details
)
C7R94_06495 H_russet EUT2E (
HMM details
)
C7R94_06500 HMMalddh_2_egra EUT2E (
HMM details
)
C7R94_06505 H_fuchsia EUT2E (
HMM details
)
C7R94_06510 HMMptac_2_mix EUT2E (
HMM details
)
C7R94_06515 HMM02441_05 EUT2E (
HMM details
)
C7R94_06520 P_waterBlue EUT2E (
HMM details
)
C7R94_06525 Hp_euts_wineRed EUT2E (
HMM details
)
C7R94_06530 HMM10662PduV_1_mix EUT2E (
HMM details
)
C7R94_06535 HMMreg07568_1_eut2 EUT2E (
HMM details
)
C7R94_06540 HMMreg00072_1_eut2 EUT2E (
HMM details
)
C7R94_06545 HMM06277EutA_1_eut EUT2E (
HMM details
)
C7R94_06550 HMMetlyEutB_1_EUT1 EUT2E (
HMM details
)
C7R94_06555 HMMetlyEutC_3_eut2 EUT2E (
HMM details
)
C7R94_06560 HMM02866_1_pvmeut EUT2E (
HMM details
)
BMC shell protein types:
BMC-H (
map on tree
)
H_fuchsia
H_russet
BMC-Hp (
map on tree
)
Hp_euts_wineRed
BMC-P (
map on tree
)
P_waterBlue
BMC-Tsp (
map on tree
)
Tsp_orangePink
Reference:
BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data