Home
BMC loci
Shell proteins
Help
Locus database
News
Citations
Contact
BMC type:
ETU
(
complete list of loci
) (
list of all HMMs in BMC type
)
Example locus:
Organism: Clostridium kluyveri (strain NBRC 12016). Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
BMC-P
BMC-H/Hp
BMC-Ts/sp
BMC-Tdp
AldDh
PTAC
signature enzyme
AlcDh
regulator
others
no assignment
CKR_0754
CKR_0755 H_fuchsia ETU (
HMM details
)
CKR_0756 HMMpropdeh1_1_pdu ETU (
HMM details
)
CKR_0757 HMMpropdeh2_1_pdu ETU (
HMM details
)
CKR_0758 H_pumpkin ETU (
HMM details
)
CKR_0759 HMMptac_3_eut2 ETU (
HMM details
)
CKR_0760 HMM06723EutJMreB_1_grm ETU (
HMM details
)
CKR_0761 HMM02441_04 ETU (
HMM details
)
CKR_0762 P_clearBlue ETU (
HMM details
)
CKR_0763 HMMPduS_1_all ETU (
HMM details
)
CKR_0764 Ts_ochre ETU (
HMM details
)
CKR_0765 HMMPduS_1_all ETU (
HMM details
)
CKR_0766 Ts_ochre ETU (
HMM details
)
CKR_0767 HMMPduS_1_all ETU (
HMM details
)
CKR_0768 Ts_ochre ETU (
HMM details
)
CKR_0769 HMMPduS_1_all ETU (
HMM details
)
CKR_0770 Ts_ochre ETU (
HMM details
)
CKR_0771
...
CKR_0971
CKR_0972 HMM00465alcdh_4_pdu ETU (
HMM details
)
CKR_0973 HMMreg00072_5_grm1 ETU (
HMM details
)
CKR_0974 HMM10114PocR_2_grm ETU (
HMM details
)
CKR_0975 H_robinEggBlue ETU (
HMM details
)
CKR_0976 Tsp_pistachio ETU (
HMM details
)
CKR_0977 HMMalddh_2_egra ETU (
HMM details
)
CKR_0978 HMM00465alcdh_3_mix ETU (
HMM details
)
CKR_0979 HMMalddh_2_egra ETU (
HMM details
)
CKR_0980 HMM00465alcdh_3_mix ETU (
HMM details
)
CKR_0981 HMM00465alcdh_3_mix ETU (
HMM details
)
CKR_0982 HMM13520tp_1_pdu ACI (
HMM details
)
CKR_0983
CKR_0984 HMM02776tpparo_1_aro ARO (
HMM details
)
...
CKR_2992
CKR_2993
CKR_2994 H_fuchsia SPU4 (
HMM details
)
CKR_2995
CKR_2996
CKR_3019
CKR_3020
CKR_3021 HMM10662PduV_1_mix ETU (
HMM details
)
CKR_3022 Hp_euts_steel ETU (
HMM details
)
CKR_3023
CKR_3024
BMC shell protein types:
BMC-H (
map on tree
)
2x H_fuchsia
H_robinEggBlue
H_pumpkin
BMC-Hp (
map on tree
)
Hp_euts_steel
BMC-P (
map on tree
)
P_clearBlue
BMC-Ts (
map on tree
)
4x Ts_ochre
BMC-Tsp (
map on tree
)
Tsp_pistachio
Reference:
BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data