BMC type: CsomeBCy

(complete list of loci) (list of all HMMs in BMC type)

Example locus:

Organism: Fremyella diplosiphon NIES-3275. Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Microchaete.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

           NIES3275_51360
                  NIES3275_51370 HMMreg00126_1_mix CsomeBCy (HMM details)
                       NIES3275_51380 Ts_poisonGreen CsomeBCy (HMM details)
                            NIES3275_51390 HMMccmN_1_CsomeBCy CsomeBCy (HMM details)
                                       NIES3275_51400 HMMccmM_1_CsomeBCy CsomeBCy (HMM details)
                                         NIES3275_51410 P_electricGreen CsomeBCy (HMM details)
                                           NIES3275_51420 H_neonGreen CsomeBCy (HMM details)
                                             NIES3275_51430 H_neonGreen CsomeBCy (HMM details)
                                                         NIES3275_51440
                                                                   NIES3275_51450
                                                                 ...
                                                                    NIES3275_14760
                                                                         NIES3275_14770
                                                                             NIES3275_14780 Tdp_turquoise CsomeBCy (HMM details)
                                                                                          NIES3275_14790
                                                                                                   NIES3275_14800
                                                                                                 ...
                                                                                                       NIES3275_19990
                                                                                                           NIES3275_20000
                                                                                                             NIES3275_20010 H_lime CsomeBCy (HMM details)
                                                                                                               NIES3275_20020 H_peaSoup CsomeBCy (HMM details)
                                                                                                                           NIES3275_20030 HMMreg00486_1_mix CsomeBCy (HMM details)
                                                                                                                                                 NIES3275_20040 HMMreg00486_1_mix CsomeBCy (HMM details)
                                                                                                                                               ...
                                                                                                                                                      NIES3275_45850
                                                                                                                                                             NIES3275_45860 HMMreg00392_2_grm2 CsomeBCy (HMM details)
                                                                                                                                                               NIES3275_45870 H_neonGreen CsomeBCy (HMM details)
                                                                                                                                                                        NIES3275_45880
                                                                                                                                                                           NIES3275_45890

BMC shell protein types:

BMC-H (map on tree)

       H_lime
       H_peaSoup
       3x H_neonGreen

BMC-P (map on tree)

       P_electricGreen

BMC-Tdp (map on tree)

       Tdp_turquoise

BMC-Ts (map on tree)

       Ts_poisonGreen