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BMC type: SPU4


Organism: Cohnella kolymensis. Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Cohnella.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

                          SD71_05000 (fasta)
                                    SD71_05015 (fasta)
                                      SD71_05020 (fasta)
                                         SD71_05025 (fasta)
                                                SD71_05030 (fasta)
                                                            SD71_05035 (fasta) HMM13520tp_1_pdu EUT2D (HMM details)
                                                                    SD71_05040 (fasta)
                                                                         SD71_05045 (fasta) HMMptac_3_eut2 SPU4 (HMM details)
                                                                            SD71_05050 (fasta) HMM02441_04 SPU4 (HMM details)
                                                                             SD71_05055 (fasta) HMM02441_04 BUF1B (HMM details)
                                                                               SD71_05070 (fasta) H_fuchsia SPU4 (HMM details)
                                                                                     SD71_05075 (fasta) HMM00121_isom_1_spu SPU4 (HMM details)
                                                                                         SD71_05080 (fasta) HMMspu02502_1_spu SPU4 (HMM details)
                                                                                           SD71_05085 (fasta) P_orange SPU4 (HMM details)
                                                                                             SD71_05090 (fasta) H_fuchsia SPU4 (HMM details)
                                                                                               SD71_05095 (fasta) P_grey SPU4 (HMM details)
                                                                                                    SD71_05100 (fasta) HMMspu01791_1_spu SPU4 (HMM details)
                                                                                                     SD71_05105 (fasta)
                                                                                                          SD71_05110 (fasta)
                                                                                                            SD71_05115 (fasta)
                                                                                                                     SD71_05120 (fasta)
                                                                                                                             SD71_05125 (fasta)
                                                                                                                                      SD71_05140 (fasta)
                                                                                                                                           SD71_05145 (fasta)
                                                                                                                                                    SD71_05150 (fasta)
                                                                                                                                                               SD71_05155 (fasta) HMMalddh_3_aromic1 MIC1 (HMM details)

BMC shell protein types:

BMC-H(map on tree)

      2x H_fuchsia

BMC-P(map on tree)

       P_orange
       P_grey

(complete list of loci)

Protein sequences:

>SD71_05000_UniProt_A0A0C2UX68
MAIQESAATRFWESYHGPNLGYIQEMYDRYVRDPQSVDSSFREMFERWGPPPEETRSAESISTAPMRVSAAAPDPRFLKKLVDAGKLALNIRLYGHLAVEIDPLGLRDKPDTSLLEPETFGLAQDDLTAIPASLIWEHAPDNVKDGWHAIQKLKEIYTDCIAFEFGHVHEEDERIWLNRQAESGIARKPLEVKERIALLQRLIEVEQFESFLQRNFVGQKRFSIEGIDMLVPVMDEIVREMAHHGAKEILMGMAHRGRLNVLAHVLGKPFGKIFSEFAHSPNKDLIPSEGSIGINYGWTGDVKYHLGAHRSIKAGETVETRITLANNPSHLEFVNPVVEGFTRAAQDDRSQPGYPKQDFGIAGTVLVHGDAAFAGEGIVAETLNFNSLPGFQNGGTIHIIANNRIGFTTDIKDSRSTYYASDLAKGFEIPIVHVSADDPESCIAAVRLACEYRNRFRKDFVIDLVGYRRYGHNETDDPETTQPAMYQKLREHPMVSDLYADKLKKKGLTNDEQIAQIRSEVRSKLQVALDEVKGNEDKGGGRRSEQVSLRKMADVRTAVPLEQLRAINAELLKWPQDFTVYPKLERILQRRADALEPGGKVDWGHAETLAFAAILADGKPIRLTGQDSERATFAHRNLVLHDPHSGRTFCPLHRIPQSKAAFAIYNSPLSEASVLGFEYGYNVFSPQTLVIWEAQYGDFANAAQVIIDQFLAAGRVKWSQRSSLVLLLPHGYEGQGPEHSSARLERFLQLAAEDNFTIANLTSSAQYFHLLRRQAAFTESDEARPLVIMAPKSLIRNPRVASSPEAFGEGSFMPVVEQHGLGGQVDAVQRLILCSGKVGIDLETAIDESDRDRSWLHVARVEQLYPFPKGEIERVIGRFPNLKEIVWVQEEPQNMGPWNYIEPRIKARASEGAAVRFIGLPKRSSPASGFQEIHNYEQQRILSVALSRSTLDVNK

>SD71_05015_UniProt_A0A0C2QFZ2
MEKGCKFGSHRVLEPSGALPQSALKLDNTPKIYSNEILIDVGILNISATAFTRIEKLTGGDLKGIAEEVIKIVNERGKFQCPDTGSGGMLIGNVDKIGLDLNGRAGVKIGDKIATMVSLSLTPLFIEKVLEVNVDTDQLRVKGKAVLFESGIYAAIPEDLPESLSVAVMDVAGAPAWTAKYVKAGDIVVVIGAGKAGLLCLHEAHKRAGITGKVIAIESQAAQCELVERLQLADIVIQADAAQPVSVMQKLLQATGGRLADFIVNTVNVPNTEMASILACRDHGTLLFFSMSTNFAKAALGCEGVGKVLTLLIGTGYTEGHADITFQILRENSGLRQYFHGLYK

>SD71_05020_UniProt_A0A0C2UX40
MTGEHMILHLLLWITALGFLTFFDFAAKKRLGVKSQGYLNLRLPKSIALILASVTAIISLYLLQKDLIQPNSSSYLAIPYFAAISYFIVSFFREIKDVSASKDVRR

>SD71_05025_UniProt_A0A0C2UJG5
MSSLIRVRMSAHNAHYGGNLVDGAKMLQLFGDVATELLIKLDGDEGLFKAYSMVEFNAPVYAGDYIEAHGEIIHIGTTSRKMRFEARKVIIPKPEINDSACDLLDEPIIVCVAEGTCVTPLDKQRKHSERLVE

>SD71_05030_UniProt_A0A0C2UJD4
MQKLILTAAISGAEVTKELNPAIPYTIAEMVKEAKSSYDAGASIIHLHVRWDDGTPTQDRERYRQTIEAIKQECPDVIILPSTGGAVGMSAEERLQPLDLQPEMATLDCGTCNFGGDDVFENTETMIEAFASKMIQTGVKPECECFDKGMVDMAIRKANKGLIQKPMHFNLVLGVNGGIAATARDLTFLVDSLPEGSTWCVTGIGRSEFPMAAIAITMGGHVRVGFEDNVYLQKGKLAASNGELVAKVVELAKLLGREIATPSEARAILGITKSVVQI

>SD71_05035_UniProt_A0A0C2UYS5
MANQAVKSGSMSLVDFFMLGFGSMVGVGWSVAVNGWFASGGGPVTTFLAFFIGTLLMIPIGFCYAELTPAMRVAGGAVAFAYRAFGKFPSFIAGWFIALAYITVLPWEAIYINDVLALIFPALKSGEPLYSIAGAGIYTNGLIIGVILSLLLIWMNHIGSRTAIKFQTYLTGLLVIVGALVILFAFIKADPANLQPVYENIGKGTHSNFFGGLIAMFAMAPFFLAGFDTIPQGAEEGDSRINFGNLGKVLVGSILAAGGFYCLVILSTGMAMPWKDFAGLERPAVALMFTELYGDGAFGVTLYWIAMIGALAGLLTTWNGLYIASARLLLGMSRARLIPEYFSRIHPKYGTPVGANSFIAIATLIGPFVGMGIIDPLTIVGGTAFVIGWFAVALCAIRLRQTEPDMHRPFKMPGGVATAWVGAIISAALILSTLIPGLPSYMGNLGIYILLGWSTLGLVFYFSSQSYRNAISERERAASIFLDR

>SD71_05040_UniProt_A0A0C2R627
MNQLKILVEAATLYYQLDYSQQEIAHKLGISRPTVSRLLQQAKQKGIVKIGIFDPIEDAVTLAEEIKQRFELNHCMIVSVASSDDQLIKSSLGKAAAHYLYDTVNDGDIIGVTWGTTLHQVAVHMKQKYVRDVKVVQLNGGVSYSETNTYAAEILNEIGKAFYTTPHFLPLPAIVDQAVVKQTIVADRHIQSVLQLSEKANIAIFTVGEFSEQSTLIRAGYFSKEDMAILNEKGAVGDICSRVFDKDGRICHPSLNDRTIGIELNKFKEKEKRILVAGGMNKVAGTYGALQGRYPNVLIIDQFSAKALLEMSQE

>SD71_05045_UniProt_A0A0C2QFZ5
MDNQLKDAISRAVIQALENRRSPLQQIHEVPIAVSNRHVHLSRKALDRLFGRGYELKKWKDLSQPGQFAAQETVDLIGPKGIIRNVRVLGPSRGDTQVEISLFDGFTLGSHPPIRDSGDLADSSPITIQGPRGQLKLDRGLICAARHIHMHPNDAIRFGVSEGQRVSIQVPGARAVTFDNVLIRVSPKYRLEMHIDLDEANAANLKTGQIGYLSRA

>SD71_05050_UniProt_A0A0C2UX46
MDRHIASVVRQVVDEYLSRLEAEQHKTKLVIVLEYESVEQDGVLKAVQSLTAAYEAAVFASEAWHTQAVNQLKPISVFQLRGNRKALIEALQSAEALVVPSISYSYIAKLSMTMDDDPPLYASIAMQLQGKPVMICDDNLAFDVREASMV

>SD71_05055_UniProt_A0A0C2UJD9
MKLSELSAAITKLKDRPAKKKLVSAEQVRSLAAKGQRELIVSKQAIVTPMARDILRQHGMTLIFKDEKGRG

>SD71_05070_UniProt_A0A0C2UYS8
MTREALGMIETRGLVGAIEAADAMVKAANVTLVGRETVGSGLVTVMVRGDVGAVKAATEAGAEAAQRVGELISVHVIPRPHQEVEAIMPKLNVSNEPVS

>SD71_05075_UniProt_A0A0C2UYV9
MLRKPLAVANWKMNLSLDDALHYVREFDASRRTVEAVVCPSLPFLFPMHQLSTSMNKPLSFGAQNMHWNEAGAHTGEVSASMLRQVGCSYVIIGHSERRTAGETDEQIHRKVASALAGDLTPILCVGESAVERVSRRTTQVIRRQLTAALEGVKDIARVVIAYEPVWAIGTGEPATAAYAQTVHSDIRGIIRRISPESAEKVRLLYGGSVKAKNASEYSAQPDIDGVLVGSASLSIAEFQAIIQSFGTKVGGP

>SD71_05080_UniProt_A0A0C2R631
MKKQIAIGSDHGGFELKEKLKAQLNEWGYECLDFGCHDKNAVDYPDIAFLVGECVAGNENFVGIMLDGAGIGSGMVINKIPGARCAVCWDLSSVINSREHNNANVLSIGGQYIGEGLAKQMVKTWLETPYAGGRHDRRVTKMMEIESRFIKRSK

>SD71_05085_UniProt_A0A0C2R659
MYIGKVVGTVICTRKDESLTGLKLLVVQPLGDDLAPKGKPVIAIDTIGKAGRDDIVYLAKSKESSIPLDNPLVPSDAGVMGIIDQYYIK

>SD71_05090_UniProt_A0A0C2QG00
MSEALGMVETKGLVGSVEAADAMLKAANVGMLRKINVGGGLVTVLVRGDVGAVKAATEAGAEAARKVGELISVHVIPRPHQDIEKIL

>SD71_05095_UniProt_A0A0C2UX50
MKLAKVIGNVVSTVKTESHHGCKLMVVLPVDTDGNPAGDSIIAVDGVNAGIGETVLIVEEGGSARDIMRNPNGAYDTVIVGIVDEGIN

>SD71_05100_UniProt_A0A0C2QG33
MITAPQVARMIDHTLLKPESTEEQIIRLCEEAMEHQFATVCINPSWVSTASKLLKGSGVGVTTVVGFPLGATSTYAKMAEARDAIASGAAEIDMVMNIGAMKSGLYETVKRDIEGVAQACKDQAVLKVIIETGHLTDEEKKKACMLAKMAGADFVKTSTGFGPGCATPEDIKLMRTTVGPELGVKASACVRDLDTARRMIQAGATRIGTSSGVSIMQGKSGQGY

>SD71_05105_UniProt_A0A0C2UJE2
MEFVLQQIRAGRVMRNVTLDQLASLTGLPVRYLEELEECRIDPQLSSLVKIASALNLTVRIGDISI

>SD71_05110_UniProt_A0A0C2UX71
MNGVKDCVPTLLGYLSIGFAAGIIEKTAGLSIAEIALLSTLVYAGSAQFIFAGMITASSTAAGIVATIFFVNLRHLLMSAALSPYFRKLSPVKNMLIGSLLTDETFGVASNQAASENKIHPSWMHGLNVTAYLNWILANVAGAVFGQWITDPEGFGLDFALPAMFIGLLALQMVSRKKYAVDITVGISAAIVGVGCGLLFSSSIAIIAATLSAATIGSVIEKWK

>SD71_05115_UniProt_A0A0C2UYT2
MEITWSVFVVIVGAALVTFVPRVLPLMVLSRFELPAWAMRWLGHIPIAVMAALVGQELLGGGGSFNITRNVDLLAGILTFFVAVKTRSLLLTVLFGVICALVLRFVMI

>SD71_05120_UniProt_A0A0C2R634
MKTLIKWVLLALVTCVGIFLLTYLNKFVLTDEPDRMQLLVAHGVSLEGVASTLPGSAVVNETEGILSVPYGRVEEYKALALRETLVKMALGVPLDNAKLSFEHFWFHVKDQLYNYLNGDFGTITGPNGQWEIPLTDALKGMLARSLGYFFPGLLLGLCLAFVLSIVASLRRGAARLLDGMHALLVGLPDFFLVTILTFASIYCYKLTGERLFHVAAFSDTVPFILPLLTIALIPGVLIYGTLRLAIERELSQDYVVTARSKGLSGREVLLTHVLRNVVEDLLIVMPKATNLALASMVVAEAFCDILGLGGTIVSSKLSGVSALPAACFILAVISIVLHAVYALLRKRFVIRVRGVA

>SD71_05125_UniProt_A0A0C2QG04
MRQRPTRLYYFSWAVIVLILLTAIFGGMIKPHGITDADKINLLKQQQNNQITYQKPPLPPGSTFLLGTDHRGYDLLSLLLNGLKYTLAIVLALTLLRMLFGTAWGLWVGVSGKGAFMLRAVHKVTSTVPAFLFIYPPVSGMYAALGLFFGSRANAESVMLFTVIFVLMVTFFGVIPLAYQVAERARYYNDKQYVEVSRLMGGSILHRTIRHILPNMRLELLFTTLSEFVQVIFLIGQLAVFNIIVWGSERIDLDDVGVEAVNLTSHGEWVSLLTYGMTYVRSYPWIIVSAAAALSLLVLSVQLFLNQLKKRFDGTVGISK

>SD71_05140_UniProt_A0A0C2UX53
MKTFIKWGLLVLFTLAGIFLLGNLNKAFINQAPDLLQVGTGEEPTLEYVSSLLPGSAVQSEEDKILRVPYAQVDEYAAKAKRISGVWYARSVPLEKPVISFKSYWYSVTDQVKGYFEGDFGSIRGPTGTWEIPIGDAVKDMFGRSFSYLIPGLLLAVCSALLLSLLASLSRQAGRFMDGIHTMLLGLPDFVLVTGLTITAIFTYKSIGVRLFNVAAFGDTVPFYLPLFTISLIPGVLIYGTLRLAIQRELEQDYVVTAKAKGLSGREVLLNHVLRNITDDLLTIMPKATNLALGSMVVAEAFCDILGLGGIIVSPKLFGVSAMPVSCLVLAVISILFHTVYVLLRKRFVVRIREVA

>SD71_05145_UniProt_A0A0C2UJE5
MHWLLSAVPAVLLLYPPLAAMYFGLGLNMGSKADPHYLTLFNIVFFGSVTLLGVIPLAAQVAERARYYNEKQYVEVSRVMGGSVLHRVLRHLLPNMRLELLFMSLSEFVHVIFLIGQLAVFKIVVGGSEKMDWDDFGLAVSVSSTGEWVSMLSYGMEYVRLYPWIPLTTVACLFFLILSVQFFLNQLKKRYGGIAEAR

>SD71_05150_UniProt_A0A0C2UYT7
MSRCYFFTGFPGFIASSLIRQIIRDHHAAIGHIYLLVLPDLLEKAREEVQRVSAEEGLPFERFSLISGDITKPDLDILPERNGLLQHEVTHVFHLAAVYDLAVPRQIAFNVNVNGTRNVNDWVQGLHNIERYVYFSTAYVSGTREGRILESELDRDQSFKNHYESTKFEAEMLVRQVMGKVPTTIIRPGIVKGNSQTGETIKFDGPYFILNVFDKVRFLPLIPYLGAGEAEGNFVPVDYVLSATIYLGHANAGIGKTYHLTDPKPYRMKDVYRFLLAEYLGKEPIGTIPLAAAKGFLSIPALRKWLRIEKESLDYLACMAAYDCTQAQNDLRGSGIVCPDFKDTVGSMVQFYERHKNDTNKQLRIS

>SD71_05155_UniProt_A0A0C2R637
METGRLIDRQRAFFDTGKTKDLAFRIEALQKLRAAVKNCEEALMQALKADLNKSEFEAYSTEIGIVLEEIRFTLRHLRSWTKPKKVKTPVTHIGSTGWVYSEPYGVALIVAPWNFPFQLAVAPLIGAIAAGNCAVLKPSELTPRTSDLLAELIKDNFPEEYLSVVPGGVETSQALLQEKWDYIFFTGSVPVGQIVMQAAAKNLTPVTLELGGKSPCIVHEDANVHLAAKRIAWGKFMNAGQTCIAPDYLYVHESIKATLLSRLAEAIKELYGDNPLNGDEYTRIVSQKHFDRLSGFLEDGVTLAGGGRNADKLAIEPTVLTGISWDDPVMKEEIFGPILPVLEYNDLTDAIEGIRNHPTPLALYIFSESESIQQRVMNSVSFGGGCINDTVYQFTSPYLPFGGVGSSGVGAYHGKGSFDTFSHKKSILKQTTLFDVPFRYPNVKNGLKKIKWFLR

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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