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BMC type: SPU4


Organism: Pseudogracilibacillus auburnensis. Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       DFR56_11010 (fasta)
           DFR56_11011 (fasta)
                  DFR56_11012 (fasta) HMMreg00072_4_pdu1d SPU4 (HMM details)
                             DFR56_11013 (fasta)
                                       DFR56_11014 (fasta) HMMreg00072_4_pdu1d SPU4 (HMM details)
                                              DFR56_11015 (fasta) HMMspu01791_1_spu SPU4 (HMM details)
                                                DFR56_11016 (fasta) P_grey SPU4 (HMM details)
                                                  DFR56_11017 (fasta) H_fuchsia SPU4 (HMM details)
                                                    DFR56_11018 (fasta) P_orange SPU4 (HMM details)
                                                        DFR56_11019 (fasta) HMMspu02502_1_spu SPU4 (HMM details)
                                                               DFR56_11020 (fasta) HMM00121_isom_1_spu SPU4 (HMM details)
                                                                  DFR56_11021 (fasta) H_fuchsia SPU4 (HMM details)
                                                                               DFR56_11022 (fasta) HMMalddh_1_eutpdugrm SPU4 (HMM details)
                                                                                 DFR56_11023 (fasta) P_heather SPU4 (HMM details)
                                                                                       DFR56_11024 (fasta) HMM02441_04 SPU4 (HMM details)
                                                                                             DFR56_11025 (fasta) HMMptac_3_eut2 SPU4 (HMM details)
                                                                                                     DFR56_11026 (fasta)
                                                                                                             DFR56_11027 (fasta)
                                                                                                                      DFR56_11028 (fasta) HMMreg00356_1_pdu1d GRM5 (HMM details)
                                                                                                                               DFR56_11029 (fasta)
                                                                                                                                            DFR56_11030 (fasta)
                                                                                                                                               DFR56_11031 (fasta)
                                                                                                                                                        DFR56_11032 (fasta) HMMreg00356_1_pdu1d GRM3B (HMM details)
                                                                                                                                                                DFR56_11033 (fasta)

BMC shell protein types:

BMC-H(map on tree)

      2x H_fuchsia

BMC-P(map on tree)

       P_orange
       P_grey
       P_heather

(complete list of loci)

Protein sequences:

>DFR56_11010_UniProt_A0A2V3VXB4
MSRAAIREKIARRAEKEIKDGFYVNLGIGMPTLVANYISDDKQVVLQSENGLLGIGPYPTEDEIDADLINAGKETVTTIDGAAFFDNAESFAMIRGGHINLAILGGMEVSETGDLANWMIPGKMIKGMGGAMDLVHGAQQIIVIMDHVTRDGEPKILKQCSLPLTGKGVVDKIITERAVMEVTDDGLVLLEIADGFTIDEVIASTEAELIVSDQLLEKAF

>DFR56_11011_UniProt_A0A2V3VUB5
MSSTTERAGLRYIHPQDVETQLFDWGTIKWFSEPNVTDAQKFSMGVVNLKPGKGHTRHNHPEEEEVLYVVSGEGEQTVNDGPVTRISAGMCIHIPAGVYHSTVNTGWETLKLVAIYSPHGPEKVLREDPNCKILDPGQLPD

>DFR56_11012_UniProt_A0A2V3VU93
MANFTRERALEQLKQQVAKGKPIIGSGAGTGISAKFAERGGVDLIIIYNSGRFRMAGRGSLAGLLPYGDANKIVMEMGSEVLPVVKHTPVLAGVCGTDPFRLMPNFLQQIKQAGFDGVQNFPTVGLIDGTFRLNLEETGMGFDLEVDMIRQAHEIDLLTCPYVFTPEQAIEMAKAGADVLVPHMGLTTSGSIGAESALTLEESAKKVQAMRDAAVKVNPEIIVLCHGGPIAEPQDAQYIFEHTEGIAGFFGASSIERLSTEPAIENQARKFKELNI

>DFR56_11013_UniProt_A0A2V3VX45
MKKTILLIGTLDTKEAEYDYVRELITAKGHRVILVDGGVLSEPTITPNIYAGEVAIAGGSSITELRAQGNRGFAMNTMSEGVAKITKELYEEGKIHGVMGMGGSGGTALVTYAMHQLPVGFPKLVVSTVASGDVRPYVGDQDIVMMNSVVDIAGLNRISRQILGNAVGAICGMVEQIIPKVKDKPLIATTMFGVTTPCVETFRAEVEKNGYEVLVFHATGNGGQSMETLINDGYIVGVADISTTEWCDELVGGVMTAGPNRLDAAALKGVPQVVSCGALDMVNFGAMNTVPEVFSHREFYKHNSNVTLMRTTPEECAELGKIIAHKLNQAKGPTTMFLPLKGLSAIDQEDQPFYRPEADAALFNAIRKNVNKDIVHLIELNYHINDPEFALAMAHHLLNMLKSKQEKETS

>DFR56_11014_UniProt_A0A2V3VZU1
MNVDRRKLIKKSKNNEYIIGLATGAGVSTKHAVEAGIDLILALNSGKYRQMGVSSLAGFLPFSNCNNLVMEFGTREIIPMAQDVPVIFGLCATDPFIKLEEYVVEIKSAGFSGINNYPSVGMLDGVFKEALEEEHISYQVEVEAIKIANETGLFTIAFVFDESQAAQMIDAGADVICAHLGFTRGGLLGAKKVLNLVESVKLVNRIFEVCDRIKGKKVMKMIYGGSVYTTTDLKYMYENTSTMGYIGGSSLERIPLEKSMPSLFEEFKITGQKEGDPFLLKMLEGVKKNYNYVDFVKEYIEMNYMHRISLAELAEVSHVSRSYLSKLFKKEVGMTFTDYLIEYRMNKAQKLIKQNEFRLVEIADAVGYADYAHFSKEFKKRVGISPRAFQEE

>DFR56_11015_UniProt_A0A2V3VV29
MSVELEQLVEKITAEVMNKLSQQSKQAVQKEDVKVNSVNSYNNQLITGTQIARMIDHTLLKPESTKEEIEKLCEEAIEFQFATVCVNPYWVPTAANALKDSNVGITTVIGFPLGATTTFTKAAEARDAIAAGATEVDMVINIGALKSGDYDAVRKDIEGVVLAVNKQAVVKVIIETGFLTEEEKKKACMLSKMADADFVKTSTGFGPGSATPEDIALMRKTVGPEMGVKASGGVRDLDTARRLVAAGANRLGASSGKEIVKGGKGKGY

>DFR56_11016_UniProt_A0A2V3VUD4
MKLAKVIGHVVSTVKTDSHQHLKLMVVSPVDHKGQSVADSFIAVDHAQAGIGDFVLIMEEGGSARQLLENPEGAVDAIIVGVVDNIEQ

>DFR56_11017_UniProt_A0A2V3VXU0
MNNALGMIETKGLVGAIEAADAMMKAANVELVGKVQVGGGLITVMVRGDVGAVKAATEAGADAAGRVGEFLSVHVIPRPHQEVEKILPKL

>DFR56_11018_UniProt_A0A2V3W9T1
MFIGKVTGKVVCTHKDEGLQGLKLLIVQPLTDKLQPKGKPLIAIDTIGQSGYGDVVYLAKSGESSLPLKKNKDLIPSDAGIMGIIDYYYTEE

>DFR56_11019_UniProt_A0A2V3VV58
MKKIAIGSDHGGFELKEKIKEELTALGYEFVDFGCHEGESADYPDVAFLVGECVATNDDYVGIMIDGVGIGSGMAANKIPGVRCAVCWDLSSVINSRDHNNANMLSIGGQTLGPGLAIQMIKKWLETDFSGGRHDRRVTKIMEIESRFLGR

>DFR56_11020_UniProt_A0A2V3VXC4
MNTSARRQVKAIVEQIIKEQIQSRSLQRQKPLVVANWKMNMSLEKALHFLNSVQSDPQDSTVVICPPYPLLYPVNIAMKKLQTGVQLGAQNVHWEDHGAHTGEVSVGMLQEVGCNFVLIGHSERRMAGESEEAIQHKVKQVLQSGMYPIVCVGENSEEFKQGLTSQIVKQQIEAALKNLPNISNIIIAYEPVWAIGTGQSATPYQAEGVHQTIRQSIHDLHGSIAHRIPILYGGSVHAENARSLAAYENIDGVLVGGASLEVKSFQSIIRSFNKELGSA

>DFR56_11021_UniProt_A0A2V3VUC4
MSTSKEEKTPKQKKTVQKTSEKNTEIQGGNKMVREALGMIETRGLVGAIEASDAMVKAANVELVGKELVGGGLVSVMVRGDVGAVKAATEAGAEAVQRVGELISVHVIPRPNSEVEAILPKKE

>DFR56_11022_UniProt_A0A2V3VUA3
MQISEQVIQQLVEEVMNKLENNANQTAVTQLGQGVYPTVDEAVQAAKQANEALKKLSLATRVQMIENMRKTSIEHAEELASLAVQETGLGRVEDKRAKNILAAEKTPGMEDLPSTSYSGDNGLTIVEQAPLGVIGSITPTTNPAATMINNSLSMVAAGNVVVYNPHPSAKQVTLQTMKLLNEAIVEAGGPKNVLTSVIEPTLETSQQLMNHPEINALVVTGGGAVVKAAMSTGKKVIAAGPGNPPVVVDETANIKKAAKDIVFGASFDNNILCTAEKEVFVVQQVAQELKTEMLKNNAIELKAFQFEKLLKEILIEKDGKHYANKDYVGKDATVLLQAAGIQADKDTKLIIVEVSNDHPLVHTEMLMPILPIVKVSSVDEAIKLAKTAEKGNRHTAMMHSESITNLTKMAQTIEATIFVKNGPSVAGLGYESEGFTTLTIAGPTGEGLTSARTFTRQRRSVLVDGLRII

>DFR56_11023_UniProt_A0A2V3VX56
MIVAKIVGNVVSTNKADRLTGKKLLVVQPVDMVSLEPDGKPLVSIDTVGSGVGEIVMVVGGSSARQTELTKDTPIDSAIVGVIDSIEIDGKETFHKR

>DFR56_11024_UniProt_A0A2V3VZU9
MRDYISSLVYQTLNDYIKKERNPSHILVLLSNGREHSKDVWEHIETLANRFHVSLLVSEQEQEQVATLDVHDCFILEKITKEDIDLFSQNMDLLYCPVISHGFLAKLSLLLDDSQSIWVTLQLALEGKEVLLGHDIIQQSRRMMFWQRPSIEKKAQSYVKELRKAGIHFCSMKQALKVISARIKVAYDRKPLVLAKHVEEVAKSGKQAIFVPKNSIITPMAKDVARELHIVIKEKNDEEKRDDL

>DFR56_11025_UniProt_A0A2V3VV41
MKQTELQKLVEETVVNVIQSEVTSKDRMCIPIGVSNRHVHLSEAVVERLFGTGYKLTKHKELSQPGQFACKETVTVIGPRGNLRNVRILGPAREMTQLEISLSDGFVLGVKPPVRLSGDIEGTPSFILQGPRGQLKVEKGLICAARHIHMHPTDAEKFGVQHGEKVDIFVPGERSVTFHDTLIRVSESFQLEMHIDFDEANAAQIQNDQKAWLKR

>DFR56_11026_UniProt_A0A2V3VUE5
MHRVVKVAKLYYQLDYSQQEIAKELGISRPSVSRLLQEAKEKGVVEIKINDINEKEQKNAELIKERFGLKECMIVNAPKNDDFIIKKYLGSKGAEYLSEIVTEGDIIGLTWGTTIFEVAKNMTPKQVHNVQVVQLNGGVSHSETNTFASEIINYLGASFHTIPYFLPLPAIVERAEIKQMIVSDRHISSLLKLARKANIALFTVGDRHEDSTLNKAGYFNEVDMQTLKDKKAVGDICSRFFTINGEVCSEELNARTIGIDLHLLGEKETSVLIAGGSRKFNSIVGALNGAYANVLITDNYTAEALIEKFT

>DFR56_11027_UniProt_A0A2V3VXV0
MANILVVGSYVVDLMSRTPHMPSPGETVLGGPFHMGPGGKGGNQAVAAARLGSRVTMLTKVGHDVFGDEALKNFTTENIDTTHVTRHPDEVTGTALIAVDDQRENMIVVAPGACGKITKEDIVKAEQSFKDADIVLVQLETSMEAVETTINLANKLGKPIILNPAPYQDVSQDLLEKIDYITPNETEASLLSGVKVMDEASAREASIKLKEQGVHTVLITLGKTGCFVYDGTSEGGIVPAFSVNVVDTTGAGDAFNGAFATFIANGLSLQEAVTRANAVAALAVTKVGTAPAMPFAEEVEKFLAE

>DFR56_11028_UniProt_A0A2V3W9U0
MKKLLGILALVLVFTLVACSGEKANQSTENSDSDDTEKASNTEDMKIGLAVNTLNNPFFVDLKDGAEATAEEQGIELVVTDSQGDPGKQMSDVENLLQQGVDLLILNPVDSDAAGQAALLANDQGVPVITVDRQASEGDIVTHVGFNALKSGGIAAAYLEEALGGEGKVVEIQGILGTNVGQDRSSGFNDHMENVEGIEIIASQSANFDRGEALSVMEDILQANKEIDAVYAANDEMVMGALSAIESAGRLDEIVIIGTDAIDPAIEAIREGRLDATIAEPPFFLGREAVNAAIKTLNVEVVDDQITLENTLVTEDNVDEVKTR

>DFR56_11029_UniProt_A0A2V3VV67
MEKTTSKDNKQKWINLLLVLDKYRVLLIFVALLIVASLLSDAFLTTSNLFNVFRQVSIIAIMSVGMTLVIITAGIDLSVGSVMAFSGAVLAGIITAGIPLPIAIIACILVGIVLGIFNGFIVAKGKVPAFIATLAVMVIARGMTLVFTQGNPIVVSDTSFRFIGAGTIFGVPFPIVLMIVIYIIMYWVLKHTTFGRYLYAIGGNEEASRLAGISVDRVKIAVYALAGFFASVSALIYTSRLMSAQPNAGAGMELDAIAAVIIGGTRLSGGRGAVTGTLIGALIMGVLDNILNLTNVSPFYQDIAKGLVILAAVLIDSKLANLKK

>DFR56_11030_UniProt_A0A2V3VXD4
MTTLLNMENIVKSFSGITVLKNINLTVNQGEVVALLGENGAGKSTLMKIIAGVHRPTSGSIYIKGKEVTILNPKHSQELKISIIHQEFNLITDLTIAENIFLGREKRKFSGVIDWKLMHKETKKVLQKVGIDHLPAEKFISDCSVAERQLIEIAKALSFDSEILIMDEPTATLNDKETQTLLNLMDNLRKNGLGIIFITHRLEEVSQVADRIVVLRDGEYIGSEKVKHVTKDKMVSMMVGRDIQDLFPARSEASNDVVLEVNNVSVKNRLHNISFNVHKGEVLGVAGLLGSGKTDLSKALFGLYQLQQGSVKLFGQEIMTPKEAIDAGISLVTDDRKGEGLILDLSVYENILLPFYRKMTKTGILKKSRMDQIVDKWVKNLQVKVHHSSVEVGTLSGGNQQKVVLGKWLQMNPKLLILNEPTRGIDIGAKTEIYKIIKDLTNEGISILLISSEMPELLGMAHRIIVLHEGEISGELSSKEATQEKIFNYATGGETVGEND

>DFR56_11031_UniProt_A0A2V3VUD3
MKKHGILHPELNKLIAETGHTDEIVVTDAGLPLPEEVNTRIDLALKQGLVPFLELLDTVLDDLSVEKVIMAEEIKTVSPKMQKEILARLEGVEIEYLPHTDFKQRTKSARGVVRSGEFTAYANVILVGGVVY

>DFR56_11032_UniProt_A0A2V3VUB2
MKKATIEDVARKANVSVATVSRVINAQGGVRKSTEEKIVQAIKELNYVRNAVARSMVRKETKTIAVIVPDICNPFFSEVVAGVERKAIAKDYFTMVSSSNESKINERKLIQHIIERGVDGVVVTTADESGEQLKPLFDLRVPIVAVDRVIKNYQVDTVIIGNREGAYEAVRHLIHEGHKDIAIIRGPQNTTPGYERYNGYVQAMKEFGLDIREEFIGDGDFREDSGYEIAKKFSQLDTPPTAIFSSNNLMSIGALKAIQEMNWKLGEEISFLGFDDIEIATFTRPQITTVSRPMRQLGEVAFQLLYDQLMEENIEERKSREIILTPHLNVRESCKRKIVL

>DFR56_11033_UniProt_A0A2V3VX62
MSSPVTPHIRAIDGINPNDRAFMDARKGGVTTVQIMPGSANVIGGEMLIVKTYGNIVDQMAVRTLSGLKAATGENPKKVYGSKGKMPMTRMGVAATLRKKLVEGQNYLEKLAAGKGERDLELEIIGKVLKREIPLRVHAHRSEDIATVLRIKKEFNLEITIEHCTEGHLIADYIAEHDVKVSVGPTMSSRSKLELSEMGWYTLPALEAAGVPVSITTDHPVVPIEHLMTSAIYAVKDGNYSEESALKAITINAAKHLGIENQVGSIEVGKDADFVVWDGDPFDLRTEVVETYINGEVVYG

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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