Home BMC loci Shell proteins Help Locus database News Citations Contact

BMC type: SPU2


Organism: Spirochaetes bacterium GWC2_52_13. Bacteria; Spirochaetes.


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

      A2Y31_00675 (fasta) HMMreg00455_1_GRM5 SPU2 (HMM details)
             A2Y31_00680 (fasta) HMM00107alcdh_2_mic1mix SPU4 (HMM details)
                   A2Y31_00685 (fasta)
                             A2Y31_00690 (fasta)
                                   A2Y31_00695 (fasta)
                                          A2Y31_00700 (fasta)
                                                 A2Y31_00705 (fasta)
                                                          A2Y31_00710 (fasta)
                                                                   A2Y31_00715 (fasta)
                                                                       A2Y31_00720 (fasta) HMMnopfamclust3_1 SPU2 (HMM details)
                                                                           A2Y31_00725 (fasta) Tdp_petrol SPU2 (HMM details)
                                                                            A2Y31_00730 (fasta) H_lightNavyBlue SPU2 (HMM details)
                                                                             A2Y31_00735 (fasta) P_viridian SPU2 (HMM details)
                                                                              A2Y31_00740 (fasta) P_kermit SPU2 (HMM details)
                                                                                       A2Y31_00745 (fasta) HMMalddh_1_eutpdugrm SPU2 (HMM details)
                                                                                        A2Y31_00750 (fasta) P_orange SPU2 (HMM details)
                                                                                         A2Y31_00755 (fasta) P_grey SPU2 (HMM details)
                                                                                           A2Y31_00760 (fasta) HMMspu02502_1_spu SPU2 (HMM details)
                                                                                               A2Y31_00765 (fasta) HMMspu01791_1_spu SPU2 (HMM details)
                                                                                                      A2Y31_00770 (fasta) HMM00465alcdh_4_pdu SPU2 (HMM details)
                                                                                                            A2Y31_00775 (fasta)
                                                                                                               A2Y31_00780 (fasta)
                                                                                                                   A2Y31_00785 (fasta) HMMspu01791_1_spu SPU3 (HMM details)
                                                                                                                          A2Y31_00790 (fasta)
                                                                                                                               A2Y31_00795 (fasta)
                                                                                                                                       A2Y31_00800 (fasta)
                                                                                                                                                            A2Y31_00805 (fasta) HMMreg12833_4_GRM5 GRM5 (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_lightNavyBlue

BMC-P(map on tree)

       P_orange
       P_viridian
       P_grey
       P_kermit

BMC-Tdp(map on tree)

       Tdp_petrol

(complete list of loci)

Protein sequences:

>A2Y31_00675_UniProt_A0A1G3MUL0
MIKREKRIQELTNFIKVNNACSISELSTKFNVSEMTIRRDLAILESNGIVRYLHGGALYNSGSDTQQANSDDVKDFNDSDYLFNQQIVKNREDKIAIARKASTLLEQDESVMIDSGTTMSYLCREIENTFSFTAVCWSLNVLVELSRKPNCKLISYGGYFHSQTKMFENPYPSDFMKYTRASKVFISAGGIHPQLGVTCPLSYESETKRKAIESSKTSILLVDASKFGKVCPTHFANIEDFDIIVTNDSLEESMKKEIISRGVRLILV

>A2Y31_00680_UniProt_A0A1G3MS79
MLAFIYDSDNKLSLKQIERPASSNTSAVVKVEATSICGTDLRAYRFGSSKIKAPRTIGHEMVGTIVEIGKDVKNFSIGDRVQVAPAIGCGVCPSCRKGKTNLCDSLKTIGFEFDGTFAEYVHIPVEAFMQDHVSKVPDGLDPREAVLTEPIACIVNAQQYLNISKGDIVAIFGSGFIGTMHAQLAYHQGASKVFMIDVNDARIAKAKEMLPMLYGINSMKEDLFPTIMQHTDNFGVDVAITACSVGSAQSDALGIIAKQGRISLFGGLPKESKGFLDSNIIHYKEISLFGAHASTVSQNRYVLDLIARGKLNVKPFIEKTFPLSQIVEAFEALNNELIVKAVLIP

>A2Y31_00685_UniProt_A0A1G3MS60
MKSRLFVVFMVLLLVVSVFTVSAGAQKEAVAEKPLIGFITNGPYEFWTYSAAAVEILKKDLDIDVEFLLPPNGLPEEQKRFIESLVTRGVDGIGISVTDPDNVTPFLNEIMETVPMVMFDSDAPNSNRLAYVGMSNYAAGRMAGQAVTEVLPNGGEFMIIVGRLDAQNAIERRQGMIDELNGEPYVAQYPGKMTPNTPNLKLGGGKWTLLETRTDGGDQSKAKSNSEDAILKFPQMDLMVGMWSYSSPAIISAVADAGLLGKMKIIGFDMENELLQAVKDGNAYAALGQDPFTYAVRTIEILAKKARGEAVSIPADKLIDVPALKITGQNIDEVWGKYKAQLSDGNKYLEATK

>A2Y31_00690_UniProt_A0A1G3MS87
MKNEEKPSSIGHDLPEEYVLEVKNISKSFPGVRALNDVSFNLKVGETLALVGENGAGKSTMMKILAGVYVPDAGEIIIEGNAVSIGSVERATQFGVALVHQELNLCDNLSIAGNVFLGREPRYRHLKKVIDFDKMNNDATEVLNRVGLHLNPSIILKELPISSQQLVEISKALSINAKVVMFDEPTSSLSEHETEQLFKVIRDLNQNGISCIYISHRLGEVKEVADRVIVLRDGKLSGSLNKNEIDRDKMIRLMVGRDIEKMYEKRHLVTDKVRLQLEDLIVPKQARFPVNLSVRGGEIVVLSGLIGAGRSELLHTIFGVDKSWGGRILLDGKEVTIKKPVDAIHAGMVLVPEDRKLNGLVVNMEVDNNIALPGLCDNLSKKGFIEKRKVAELAERMVQKLDIRLFKTTQFAESLSGGNQQKVVLAKWLAMNPTLLLLDEPTRGIDVGAKAEIYKLLEDLAQLGVAILVASSELQEVLGIADRIVVMCEGRITGELDPASCSEEDIMKLATERLV

>A2Y31_00695_UniProt_A0A1G3MTD1
MKRIGGITFLLSLIILVTAIINPQFLSSYNIRNILRWTGLFGLLSLGAAFVVITGGIDLSIGSVVGLIGSIAAYLMVHAQWPVWVVLIFIIVLSATIGLIHGLLITKIHMQAFVVTLCGLFVYRGLARYLMDDRTQGYGTGFQSVRFLASGRLPSAFWTDGQAPKFILNWSIPMPFILLLAIAVLMAIVLNKTIYGQHLKATGRNECASRFSGIHTDNVLIIAYVISSTLAGLGGLLFSLDLNTVQPSSMGNMYELYAIAGCVVGGVSLRGGDGSILGVILGTAIVRVLYNAINVAGVSTQLEQVVLGLVILIGVAADEVVRMIAAQRKVRESMILAQKALEKSKQAET

>A2Y31_00700_UniProt_A0A1G3MS73
MADYLGKIWTREGLRAYISDESAIAGASPFVFNDGKAAGVQGVDVYTGSGLAFQVIPGRALDIYGCSFKGIPLQFTSATGMTSPGYYEEPGLNWLRTFFGGLLSTCGITNSGAPSIDNGNAFGLHGRIGNAGAEDVSVSQKWIGDEYSISISGRMREAFVMGENLTLTRTISTRLGSSTIRIEDAIENRGFEPQPLMMLYHFNFGFPLLSEKSRIVIPSKTTTPRDKQSEVDNGVSECFEYPKPIQGYKEKVFFHSVGAESDGKTFVALVNPDIQGNPLAIMLRYNRYELPELTEWKMPGKGCYVCGLEPGTVNPIGRAKARENKLLPMLDPQEVYNVTIEFEVLDSIDKIKGLDVYAKSLRNS

>A2Y31_00705_UniProt_A0A1G3MS67
MEQSEIFRIVKEAVKTHDGLLRMRPSWVARTFLEPGKRLGLKEHEYPVGKRGFICERWLGSETEVDNEVKFENEGLSLLDIPGHDILLRDAVQAAKTEILGAEYAKNHKNLLRLAKIYDYKGRIFYHFHQTQEEASKVGATSKEEAYYYPEGVDLGPHPETFFGVHPYIVEQNKQYEILLPCLKEWDSELILQHSRAYLNVPGEGFHLPAGVLHAPGSALTIELQEPSDVMSVFQSNVEGKQISKELLFKDVEKKVVQEKQEKAVLDQLNWDINGDPYFYENRHTPPILIEETATEESQEYWIYYNTTRFSGKKLVVKPHKKVLSKDMGVYNILVWKGRGKADDLLVEGQNFGKDELLVVDDKARKGVLYENTGDTDLVILKFFGPDINNSVIPFIPKYPEQKKS

>A2Y31_00710_UniProt_A0A1G3MT88
MKKPKIGLLGIMHGLYDEKQPEITAQQEKFAREVIGKLSDRADITFKKAAKTRTQIEETVAEYNNGGYDGIMIIMLLYSPGFTLIGALKENRLPVMLANVQPLPVVTTDWDWSRLTTNQGIHGAQDTANMLLHAGIKPAIITEDWKSDAFKEFFTDWAKAAQTHNALKKMRLAVFGRMKGMGDIVGNDEKFYRMIGPEVFFEGIGDIYKLMLEVTDKQIAESIAEDKRNFQVDPKLTLERHQYAARMQLAFERFLIENRFNGFSANFGVFAEDGRFKQINMLAASNLMAKGYAYSNEGDVHTAALVGAGHILVGDAHFTEMYSLDYEKDSALMSHMGEGNWKIARKDRPIKLIDRELEIGGLDNPPTVVFSAQPGPGTLVSLAPLDDVDYRLVICNGSILDTPEYKNVPMTYFHFKPDTGIRSAMDNWMRYGGTHHQTLTLGTHGRRWEMLCDMLKIAYEKV

>A2Y31_00715_UniProt_A0A1G3MSR7
MEKKYVMAIDQGTTGTRVILFDHEGQVHSTAYHEIKQIYPHPGWVEHNPVEYWETVLDCTREILAEGKANIEEIACIGITNQRETTILWDKITGEPYYNAIVWQCRRSAEICESLKEKGYEPMIRRKTGLVVDAYFSGTKIRWILDNVPGIMDRIRENRVCMGTIDSYLIWKLSGGASHVTDYSNASRTMLLDVHNLAWDQELLDMLDIPASILPELKPNSGHMATTSAKVFFGQEIPISGSAGDQHAATFGQTCFEKGMAKNTYGTALALMMNIGETFVPSKHGLTTDLLWNIDGKTSYGFEGVIFIGGAAVQWLRDGLKIIESASMCDRLAEKVPDTGDLYLVPAFTGLCAPYWDMYARGLLIGITRGTTQEHIARAALESMAYQTRDVVDAMVKDSRVTPESLRVDGGASKSDFLMQFQSDILGIPVERPVVSEMAARGAAYLAGLGIGFWSDLKELSRHWKRERLFEPTISVDQRESLYDGWREAVNRSLQWDNRSKLKRK

>A2Y31_00720_UniProt_A0A1G3MS90
MRPDRFVDKVAFITGGGQGMGQQLAVDMAREGARVVVVDIDVQGLEETRTLLEEQNSDYLIIECDISDDVQVADAIGKTIGKYGRLDILVNNAGLLRNATIEETTNDLIDKTIDINIKGILYAIREVTPIMKRQSYGRIVNVSSITGKNGDNSTTFVYGASKGAVITITRSVARQLGPFGITCNAIAPHAVMTKMMYYWDDAKKDAMAEKIPVKRLGTVKDMSNLMMFLSSDDASFINGEVVNINGGYYMD

>A2Y31_00725_UniProt_A0A1G3MS86
MGVDLRTYVFLDSLQSQMASFISTISKGYFPVAEQACAILEISPGIEINRVTDIALKATDVKPGIQIVERLFGLLEVHSDSQADVRQAGEAVLKALGLKEEDRIKPQILTSQLIKNMSDHHCQLINKVRHGNMVLRGDTLYVLELQPAAYAFYAANEAEKASHINIVEVVGYGSYGRVYISGNEAEVLISKEIVESRIASLSGRVLSDKSKE

>A2Y31_00730_UniProt_A0A1G3MUL9
MAEIFDSALGMIETRGFAAMVEASDAMSKAAKVQLVGYQQIGGGYVTAIVRGDVAAVRAAIEAGTVAAQKVGEIVSSHIIPRPHTMVDEVLPLGRPEKKK

>A2Y31_00735_UniProt_A0A1G3MS93
MVLGRVVGTVVSTAKAEQLESLKLLLVEKISIPSLAGVNDFVVALDSVGANIGEIVFYVTGSSARLTSVSKGKPSDATIAAIVDNIDLYGNMIYRKDQNLED

>A2Y31_00740_UniProt_A0A1G3MS70
MNFARVCGSVVSNTRDESYISSRFMLVEICDSEAKGSGSYLVALDIIDSRPGDMVLVCQGSSCRWTFETENLPVDTLIVGIVDRVYSGNKTLYLG

>A2Y31_00745_UniProt_A0A1G3MS97
MSQSIEDTVRTLVEKLVLEYSASSVGVDHIAPSQYASGIFPTMDLAVKAAYEAQRHLVGLPLEKRKEIVQAMRETAMDHAQEFAEMAVQESGRGNVADKIAKNILAAKKTPGVEDVETSAYSDEHGLSLVERAPYGVIGSITPVTNPTATIINNGISMISGGNSVVFNPHPGAKNVSCFAIEVLNAAIERVGGPRNLLVSLAQPTIESANEMMGHQKISLLVVTGGPGVVKAAMNSGKKVIAAGPGNPPCVVDETAKIQKAAKDIVDGASFDNNLVCICEKEVLVVKSVANELIGEMQKVGAYLLSDQQAKSLLDQIIEVPGMMNSEGVVKREYVGKSPSFLASLIGVTVPESTRLLICDVDAGNPLVWTEQLMPFLPIVRMENVDQCIDLAVQCEHGFRHTAIMHSLNVEKLSKMARQMNCSLFVKNGPCYAGLGNGGAGYTSFTIASPTGEGLTRARTFTRERRCTLVDYFRII

>A2Y31_00750_UniProt_A0A1G3MS83
MKLGRVIGTVVSTKKLECFDRKKLLLLQPIDENGQPVGKPIAAMDTVQAGEGDTVMFEGGKEAAQALDNWFNPCDATIIGIVDGISTGE

>A2Y31_00755_UniProt_A0A1G3MS76
MILAKVLGSVTCTIKHEHYKGKKILIVQPVDPNATPSGKSFLALDGVQSGIGDLVLVFDEGGSARDILGDKDLLTIRTIIGGIVDSVSKD

>A2Y31_00760_UniProt_A0A1G3MTA2
MVKNVALGCDHGAYQQKVFLKTFLENLGYNVVDVGCDMNEKVDYPDIAYAVCRKVVTESCDRGIMLDGAGIGSSMVCNKVRGIRAALCYDLKTVVNSRMHNNANVLTLGGPLHKADELSLMVRTWLETPFEGGRHIVRINKMMSIERGGLN

>A2Y31_00765_UniProt_A0A1G3MSV9
MKIAAAKINITTPRDMAKYIDHTLLKPESRAEEFDKLCKEAIEYQFKSVCVNSSWVSYVAKKLQGTKVLVCSVVGFPLGAMTSRSKAFETREAIEHGASEIDMVLAVGKLRAGDFKYVEEDILSVRRATRSSTILKVILETSMLTDEEKIIACQISKRAGADFVKTSTGFGGGGATVADVLLMKQTVGEKIEVKASGGIRDFATALAMLEAGATRIGTGSGVAVVSGMKGSGGY

>A2Y31_00770_UniProt_A0A1G3MSS7
MLNFSYWNPTRIIFGKESIADVGQESAKWGKRVLFHFGGGSIKANGVYDAVTNSLKEAGLEVIYLGGVVPNPHLSLVRQGIALCKKEKIDLVLAVGGGSVIDSAKAIAFGTKLQGNEDVWNDYFMRAQYEIQDALPVGVVLTIPAAGSESSTASVITDEKEGLKRAINSETVIPKFAVMDPETNYSLPNYQTACGATDILAHLQERYFTMVGGNDLSDRLLESCMRNIIANAPLALKNPSEYVYRAELMWTGTIAHNNLLDRGRLGDWATHDIEHELSALYDIAHGAGLAILFPAWMKYVYKDNIDRFVQYAIRVWDVSLPLEDKDSIVEEAINRLQNFYRRIGMPTSLTEAKIGKDKLRFMAEKALFGERTHLGNFKKLYVDDVEKIYHLAL

>A2Y31_00775_UniProt_A0A1G3MSA0
MDPETRKATLGLGCWAFGGGYWLDQQRDDSIRTLHAALRGGIRHFDTAQGYGKGLSEQLVGQQLKRFSKEVSREEYCLATKLFLPKSPSDILASVQTSLRRLCTTYVDILYVHWPDSTKDCRPYLQALGRVRAQGLVKHIGVSNFTQPLLQQALDATEISYCQIPLSLLWTRSLRNLAPLCTAHGLRIVAYSPLGLGLLGGRYRSREDLDAKDLRRRLFPFDMQYVETFHNLLHALEQTALEYATDMATVALAWVLAQPVDTVLTGARTKDQLYANLHGQTIPLAGSHLVALRQIADNLDDLIPPDEDNVFFHRW

>A2Y31_00780_UniProt_A0A1G3MSC8
MVEVAESEPVVAPSSARTVDEIDWDSWEPTETAVLCYLFDGDNVLLIDKKTGLGKGLVNAPGGHIEEDETASEAAMREIAEETGINVTKVEHKGVLEFQFTDGLAMRGHVFFAYEHSGELGETDEARPFWCPVSDLPYDKMWEDDRLWFPLALEGRRFTGRFIFEGEKMLSSTLIEDLDEEA

>A2Y31_00785_UniProt_A0A1G3MS95
MLKPEELAGYIDHTLLATNATEDKITQLCQEALQHNFASVCVNSCWTATCAALLKGSPVKVCTVVGFPLGAMKSESKALEAAQAVADGATEIDMVVNVGWLKEGRLDAFEQDIRLVKEACGDLLLKVIIETCLLSDEEKQTACRLAASAAGSYVETSTGFSTGGATEQDVALMRSVVGENIGVKASGGVRSFETAVAMISSGASRLGTSSGIAIVQGAASHAAY

>A2Y31_00790_UniProt_A0A1G3MUN1
MPRIEERDKLPDDFLKSLGFPSITVHQTFTHFDFTLPGRRVLVIGPMGSGKTEFSARVWRDAAIAQKKSDVIRRLTSTNGVDRRKVFFVRSEIDGQRFQEYPGDALAYRNGYIRCGENIARIRDSFGLEQVLADNPEIGTFIIDEASFFDERIAYVVRNHSLERGILFIFPTLILNFRRDIFNSTARLMLDIATDVIPLTAYCEHPDCMKDAFYTYRYYRVDGQECPALYFDPLIIVGGDTQKDDPLNPNYCSRCDEHHYLPAKEYTFFHLKPLGERASRGDAGPLRDEMYALKHHISESALYQHMDQRYGSRPDAEIFMNAIKPGCLAEKALIYLFCEQNLLAEDLLVRLVYELELDRVYMTKVLSDNLRPVSFEQPLLTVVD

>A2Y31_00795_UniProt_A0A1G3MSA5
MMQFGFRAHDFGRMTIDTLAQTFAAFAPVPIQLALHKALVDPPPQLGAMSQAYARNIRTTLAERNISIGVLGCYINPIHPDDGLLDSALQRFEEYLRYASDFGCLVVGTETGSANADCSFHPQTSSERNFDRLCRSVERLVRTAEHHGAIVGVEAVARQHTIDSCDKMVRLLDRIDSPSLQVIYDPVNLLPWEGLAEVDGSIGAVPSAQAQTIFFSQAFSAFGDKIVAIHLKDFRYVDGWKQGSMPPLAGDLDTVGLLELVSRHRPDIDILLENCEPRSAEQTIGTLRRMVDPTS

>A2Y31_00800_UniProt_A0A1G3MS82
MVCCTLEEFSGKADGVWDNSAAFASALAHIAEAGGGTLSVSSGTWLTGPIELCDNCTLELAEGACIKFVADFTRYKPVWTRWEGVDCYAMQPCIQARNRTNVVITGQGTIDGGGDPWWDYRNAIKAQTDRGPQTELEKMFAGLNPDYLKQPGGGGGRGSQFLAPPTIQLYRCEDCRIEGITVVDSPFWTIHPVYCSRLEIRNVTVRNPYEAPNTDGLDIDSCRDVIVEDCFFDVGDDAIALKSGSGADGIRVGIPTRNVSIARCTVQRAHGGIVVGSETAAGIYHVSGTDCTFIDTDRGIRIKTRRGRGGHVEDLTFTGIRMENTLCPIAINMYYRCGVSPDEGDTPFSLHAIEIGEATPKIRRVTVRNLHATGSRASAGFFVGLPESPITDLHLVGCHIDTRTHEPVPTEDSEMYDGLPLAAGRGMRFRHCSGVRLEDVHVEGTDIPYHLEEGVDFS

>A2Y31_00805_UniProt_A0A1G3MSA9
MVVSKAKPLRLALMLASIHTGSSEALWSGIADTAEASGQVLFVFPGGRLDAPGEFEYLRNSIYRLINHETVDALVSWGSSLIGTVDFSQAIAFHKQFLDLPLVTIALPMPGAHVVSFDAYQGMKSLVLHCIRTHGATRLAFVRGPENHGSAEDRYRAYLDALSESDLPILPQLISSPCPWHEGDLALSELIEERKLVPGRDFTMVCCASDMLMLNAAKVLERKGFGIPRDVGIVGFNDSVESRFLSVPGTTVRVPFSELGKVAHKVLMDSLVGTPGSDDIILPAQPVIRYSCGCLQSMAGKLSHSGCFGRAELHSWAIRYFALDQERQNAYLEPLLDALYRGVGNQGISLFPLLSKVLERYFQDEPDTSAFQQTAEAVSALEDLDPSYLESIVRRGRALALETQSRLANKRSYEFIQQAELLNAFKCDLLKAWNRQSLVAIMLQHLPKLGVSQAYLVMNENDTYSRYVGGYRAQVPIGTPDELFPSHRLLPQQIDATCGPGVYLVQPLFIENQALGYVITAIADRNALKHEELRSSISSALKGVLLFEEMAKAKDVAERAEQAELDFFASMGASLKEPVCDFIGRMDMLHELVAEESVHAGRVGHAISSLSHDMRSYLEHTKLLFDQTLAQAGSLELDRVLVAVDPLLTDVANSTGCLLTLPMRLPLVVGDKRRLEQLFSLVIASFPPAYAPVRIHVGFDGTGLHLDFQGSQTASKDAESITIVPFIESLILLHGGTYTRQETSFEMVLPWPKLGEPGGDHAPSTSKVMLVLSGGLEVGSDAHMAAKLCQFELENLSVEQLLQSPADVPEGALLYWDADLADTAQFLAMVKVSRHHALFSIPLVAFGTVLEGEPTLMYAVEKFLRSYQRGPVLVWKDMRHLPLCNALHLQPIVVTGIEQLAGIVEEVTPTCLVVRGFDSELIKLVRQSVPGSVLPLVVIVDTFPPEAEMAAVGDIPHLLLCHGAVSGYPEFCERIREIGSNGEILSAHTGILVKRAQRYMETHAKGMVTRWKIAESVNTSEDYLTRIFKKELGMSPWEYLSRYRVELSVKLLQETDLPLSEIAMRCGFQDQAYYCRVFKKLKHATPGSLRLP

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
© www.kerfeldlab.org, 2022