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BMC type: RMM2


Organism: Verminephrobacter eiseniae (strain EF01-2). Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

            Veis_0651 (fasta)
               Veis_0652 (fasta)
                 Veis_0653 (fasta)
                       Veis_0654 (fasta)
                            Veis_0655 (fasta)
                                      Veis_0656 (fasta)
                                                  Veis_0657 (fasta)
                                                      Veis_0658 (fasta)
                                                               Veis_0659 (fasta) HMM00202amintr_1_rmm RMM2 (HMM details)
                                                                           Veis_0660 (fasta) HMMalddh_2_egra RMM2 (HMM details)
                                                                               Veis_0661 (fasta) Tdp_cinnamon RMM2 (HMM details)
                                                                                  Veis_0662 (fasta) HMMnopfamrmm1_2_rmm1 RMM2 (HMM details)
                                                                                    Veis_0663 (fasta) P_cobaltBlue RMM2 (HMM details)
                                                                                      Veis_0664 (fasta) H_darkIndigo RMM2 (HMM details)
                                                                                          Veis_0665 (fasta) Tdp_sepia RMM2 (HMM details)
                                                                                               Veis_0666 (fasta) HMMnopfamclust3_1 EUT2x (HMM details)
                                                                                                         Veis_0667 (fasta) HMM13520tp_2_rmm1 RMM1 (HMM details)
                                                                                                              Veis_0669 (fasta) HMMreg00455_2_PVM RMM2 (HMM details)
                                                                                                                 Veis_0670 (fasta)
                                                                                                                  Veis_0671 (fasta)
                                                                                                                            Veis_0672 (fasta)
                                                                                                                                     Veis_0673 (fasta)
                                                                                                                                           Veis_0674 (fasta)
                                                                                                                                                   Veis_0675 (fasta)
                                                                                                                                                                Veis_0676 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_darkIndigo

BMC-P(map on tree)

       P_cobaltBlue

BMC-Tdp(map on tree)

       Tdp_cinnamon
       Tdp_sepia

(complete list of loci)

Protein sequences:

>Veis_0651_UniProt_A1WFM7
MAPLSNNDRPAPDAVLVDIANYVLDYRVDSALAYETARHCLIDTLGCGLAALEYPACTRLLGPIVPGTIVPHGARVPGTPYQLDPVQAAFDIGTMIRWLDFNDCWLAAEWGHPSDNLGAILAVADWRSRTAVAAGRAPMTMRQVLTAMIKAHEIQGCLALENAFNRVGIDHVILVKLASTAVVGALLGLARDEIINALSLVFVDGQALRTYRHAPNTGSRKSWAAGDACSRAVRLALIAQSGEMGYPSALTARHWGFYDASFRGQPFRFQRPYGSYVMEHVLFKISWPAEFHAQTAVEAALALHQRLRAMGRSSDDIASVRVRTHEACIRIIDKHGPLHNPADRDHALQYMVAVPLIFGRLTADDYEDAVAADPRIDALRAKIECVEEPAFTRDYHDPDQRAITNALTITLTDGSRLPESLVAYPIGHQRRRAEGLPLLEAKFRAHLALRLAAERQQQILQVSLDQERLEAMAVHDYVDLYASPV

>Veis_0652_UniProt_A1WFM8
MGMGWLLGATSRPSLAPASACISPLQPHGLPSSNPIFQPWCLSRAWPMGACRFAFRQTGQAVDSRHSRLGRLTAVGKLSTIHADQGQKSPFSACLRP

>Veis_0653_UniProt_A1WFM9
MMAGWRRRAGLWLPCDLSRAAAEALGMAGLGKMGANALLPPGAHRVPPLESGLVSRHGSDVVGCAQPSERSARRIAQPIPSVLASDATPRCASMASADRQMIGDATLG

>Veis_0654_UniProt_A1WFN0
MIAASAQGTGFPVSFEFFPPKTPEGAGKLRAARQQLYALHPDFCSVTYGAGGSTQQGSFDTVRDILAEGMAAAAHFSCMGATGPSVREQLATLKAMGVKRLVALRGDLPSGYGAGGQFQYASELVAFIRAETGRDFHIEVAAYPETHPQARSPEADLNAYLRKVQAGADSAITQYFYNSDAYFRFVEETRRLGADLPVVPGIMPISSSTQLLRFSDACGAEIPRWIRLRLQAFGDDSASIKAFGLDVVTDLCDRLRSAGVPALHFYTLNQSTATLEICRRLGI

>Veis_0655_UniProt_A1WFN1
MRADVFLLESGHAATRSQAQRLIASGVHWRPSPLSPWQPVAKNGADIPPGAQLHLLGAAEARYLSRAGLKLEAALGALGLCVAARRCLDVGQSTGGFTDCLLQRGAAQVVGVDVGHGQLHPQLRADARVVCVEGLNARTLTAQSLPGPAGFDLITADLSFISLTLVLPALVPLLAADGDLLLLVKPQFELQPGQLGKGGIVRNAALYAVVERRIRDCCAHLALAVLAWCASPIRGGDGNREFFVHARRATR

>Veis_0656_UniProt_A1WFN2
MNARIDAPVATDCIIADIGLAEWGRKEIRIAETEMPGLMAIREEFAARQPLRGARIAGSLHMTIQTAVLIETLQALGAQVRWASCNIFSTQDHAAAAIAASGTPVFAVKGETLAEYWDYSHRIFDFGPGTGPDLILDDGGDATLLMHLGRRAQENAALIANPGSEEESCLFAAIRARLATDPHWYSRKGAAIIGVTEETTTGVHRLKEMAAQGALLFRAINVNDSVTKSKFDNLYGCRESLVDGIKRATDVMIAGKVAVVAGYGDVGKGSAQALRALSAQVWVTEIDPINALQAAMEGYKVVTMEYAADKADIFVTCTGNKDVIRHEHMLAMKDQAIVCNIGHFDNEIQVATLAPYRWEEIKPQVDHVIFPDGKRIILLAKGRLVNLGCGTGHPSFVMSASFANQTIAQIELFTHCDDYDSGKVYVLPKHLDEKVARLHLRKVGAQLTELTPEQAAYIGVPRQGPYKAGSYRY

>Veis_0657_UniProt_A1WFN3
MSYAPETRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQIAGAVKGRKASRHATSDWMEIEKQRGISVASSVMQMLYREHVINLLDTPGHKDFSEDTYRVLTAVDSALMVIDAANGVEAQTRRLIEVCRQRNTPIISFVNKMDREVRDPLDILDEVERELGMPCCPMTWPVGQGKGFGGIIDLRSQTMTVFEPGSQRRPQDFEAIALSAADRLRQRFGAAFDAALDSMELAAGASPAWDPAAFLAGKLTPVFFGSGVNNFGVLEVLDALVDMAPPPGARISTLGAGEHAVVRTIQPEEEGFSGVVFKVQANMDANHRDRIAFVRVASGKYLPGMKLKVQRTAKELRPTSVVTFMSQRREAVQEAYAGDIIGFTTHGGVQLGDTITDGANLQFTGLPFFAPEMFMTVVLKNPLRTKQLQQGLAQLGEEGAIQVFRPDAGGNMLLGAVGQLQFEVVQHRLKAEYDADMRLETCQYTGARWITADSPAELRAFTDAYPQRMAHDAADTLAYLCTSPYDVRLAQERFAAIHFHPLREHAGLALMK

>Veis_0658_UniProt_A1WFN4
MFRRARPLRKTTRINGLERNGLKRSGRGWNAPGADVLARHCPLLPGRADAIGRGRLIVATWPKSAAKQRQNVPPARSRTRWRSMSSCHRSGPQKRGRDSGAVTAVTGAPNGQATAFVSLNDEVDAVAAAANLWVRAKSPLHGHAEHLRCEARLATFGARRQRQRVRGRARPECPRRRRSAMADMPPSAP

>Veis_0659_UniProt_A1WFN5
MFDYGFFRFESKEDLYAKAAAFWNPGKVKLWRDAGTDLVIDRREGYFLYDMSGKRLIDLHLNGGTYNFGHRNPELVATLKSALDYFDMGNHWFPSVARAAFAEKLVGTAPGMDYALLGAGGAEAVEIAIKSARFATQRRKIVSIVKGYHGHSGLSVATGDERFSKIFLSDRPDEFSQVPFNDLDALEAVLRKRDVAAFIIETIPATYGFPMPKDGYLQACQNLCRKYGAMYIADEVQTGLMRTGIMWGWQSYGLQPDMFVTAKGLGGGVYPISACVATEQCAAWQKQDGAAHISTAGGSELGCVVAYQVLNMLERPALVSNVHYVAEFFAQAFAQSMAVHSDIFVGVRQRGVILGLEFDHPEGAVAVSRALYEHGIWAIFSSLDKRVLQFKPGVLLTAPLCQEIVDRFDAAMPRARELLRNARREAQA

>Veis_0660_UniProt_A1WFN6
MRKMHEFMQQEQARLVVPDQDLACGLLQLDRAEWAARDFAQFDREQVLRVAEAVAKAAHDNAAFYAEWAVRETGYGVVEHKQKKNESVAYPLLDFYRDLDLVHPRVDEARKMVEIPKPAGIVLALTPATNPVATVYYKVMLALLSRNAIVISPHPAASRCCNDAARKLDAAAHAAGAPPGLIQCIERPSIPLVDTLMRSPQVAVVMATGGGPMVRAAYSSGNPAIGVGPGNAPAYIDTSADMRKAARMIVSSKSFDNSVLCTSESVLLVQQKDAQRFERELRAAGAHLCQEREVERLRAYLFPDGDLNPAAIGKSAVWIAREAGLKVLPATQVLVANVQHIGVDEPLTKEKLCPVLALYAVDSFERATRSAQMILRLSGAGHSAAFHGNDPQKALDFAARLNVYRVVVNAPCAQGASGFATHLPPTFMIGTGYFGRSCVGENVGPQHLVHWTRLAYNKDMSEVFGDYRHLRVTAPATGKTRSTAATQAAPARVQPPLAAGTLPTPEAAGQGIDRDFLRQLIAQELRELGRGHR

>Veis_0661_UniProt_A1WFN7
MTDLRACIFIDQLQPQTLAYMSTWMRGTLPRAKMAAQIVEMAPGLDIEALTDVVLKSADVRAGVLVVERQFGTLQFHAYSAAEVHAAADAVLRSLDKRQEELAAPAIQASRIVTRIDDQHAYLMNRNKMGSMVLGGESVYLLECQPAAFAILACNEAEKAACIKVVDLRMIGASGRLYLAGTQADVRNARDAAETALRAVGAV

>Veis_0662_UniProt_A1WFN8
MSELRALIREILVEELAALRAAPAATPACEMVDVHSDEALMAFARDLLGRANDPEFVRCVQSGQHRFTLAPTVAQPPGQRPAPAASFTLVASAPAEAPRFEKALVTERDVAAIPRDQSRIRLARNTRLTPLASDELRRRGIRIERTQK

>Veis_0663_UniProt_A1WFN9
MIRARVNGKLWSTRHLDSLPVGALLEVETESGAKLIAFDPLGCAEGESVLVTQGSVAAAYFPNRPVPIDALIIGSIDEVGTSSIGKTKSRESLA

>Veis_0664_UniProt_A1WFP0
MANLAIGMIETKGYVPALSAADAMVKAANVEIIARNEVGGGLVSVVVRGDVGAVKAATEAGAEAAGQIGEVTAVHVIARPHPDLAKHFEALNAK

>Veis_0665_UniProt_A1WFP1
MTELRVYLLIEALQPQFAACLSSPTRARGYPAFAGQSSLIIEVSPALAIHRVTDLALKSAPAMEPGILYTERQFGLLELHADSLEKLNAAGQAILDGMGAKPEDQLKPQILYHDIIENLSDQHAIILNRSREASILVPGVALLIYEMAPALFACVAANEAERAVPRAVINDVQMMGATGRVFMSGSLAEMRLARETITAKLESIPGRQ

>Veis_0666_UniProt_A1WFP2
MAKVFGRQQAKVAITGRTPDKVKSVAQRLGAQGMLVRGFVGDVANAAAVSTLMEEVAKAQGGIDILCCNAGVFPSAALGNISAADWDLVLDTNAKGCFLCVQSALPYLRQAEYGRIILTSSITGPVTGYPGWAHYAASKAAQLGFMRTAAIELAQDNITINAVLPGNILTEGLAEMGRDYISSMAASIPLKRLGAVEDIGNAALFFASREAGFITGQTLIVDGGQTLPESL

>Veis_0667_UniProt_A1WFP3
MTMATAAPITAMVGNVPIAVGFGNGANAPAGYMVATVLLTLFSVGYVEMAKHITSTGAFYGFISHGLGRVVGLASGVAVTWTYMIFEAALVGIFAFFCADLLGSLLGLRVDWIFLAALMLLVNGILCHFDIELTSRVLGIALVLEIAMLLLMAVAVLFHGGGAQGMSWESINPVNAFKAAEGIPKATAGIGLFFAFWSWVGFESSAMYGEESRNPKKIIPQATMISVIGIGALYTFVSWMAIAGTGAAESVRLAQNPATGSEIFFTPTRVLLGDWAVIVFKILLISGSFACGMAFHNCAARYSFALGREKLFAVFGSTVGRSHEIHGSPYIASFVQTLFASTLVLVFWLMGKDPYADLYAVLAILGTMAIMIVQTLCAFSVIAYFHFGGNESRRHAHWFKTFVAPLIGGVGMIYVTHLLWINKEFAAGDSATSLLFRLIPWLVAASFLTGACIALYFKYFDKDKYDIIGRIVLK

>Veis_0669_UniProt_A1WFP4
MATQSRKSRRQEQILETLLLNPTQRVHQLAQTLRVSAETVRRDLAELAEGGKLSRTYGGALRTQQFEPALSERLLLKVRERQAIARQAAQRLGNMDVLMIGGGATTLHFARAIRRLNHPMTVITPAYSVAQELSRNPCFEVMCLPGIFEGKEGLVCGPEAIKAIERFHVPVAVLGASGVSREGVSEALLSAGQVYQAIMANSDQVFVLADGSKFNKRALTLLGTWQSNITLVTDVQPSGELQTAISQGRVLVEVATLE

>Veis_0670_UniProt_A1WFP5
MGAVAFDTLKFVKTLEAAGVSVPQAEAISFAVREAHESVDVATKRDLKEMEVGLRHDTKEMEANLRHDMKEMETSLRHDMKEMEASLRHDMKKMEASLQHDMKEIEANLRHDMKVMEANLRHDMQKELAPIKADALLTKWMLGVLLAGVASLILKAFF

>Veis_0671_UniProt_A1WFP6
MRRSFSKHFSDACHPLQPLTDRCAVSSSRKAKRIVHIRFVGLDQRRNDGGPKARDTVTRRAGLLQHVSNSYRGYWQQFME

>Veis_0672_UniProt_A1WFP7
MRAPIWRRCAPCWKRAMADSLRDKIKALEISTPQGASGRLLRESQFVFNYTTQDRHCELAMGMPLRAASYTSNRPHPIFAMNLPEGNLRQRIKERYGKQFAKLDDMAMLSIVGHDQIGRLTVSDPAAPADRRTAHVGLSELLRARASDALFDYLLDTYLASGISGVQPKVLIPDAEAGGGGAAGVTRTTLSDLIVKASGLAHPNLTQNEFLCMDAARRAGIEVPEFHLSDDGSLFVLRRFDRAATRLGFEDMSVLSGQTYDEYGHYKYGGSYELIPSIIEAYCGPNAAESKQRFFEYFTASCMMRNGDAHMKNFGLLYARPNDPASVRLSPMYDVVTTSVYDVVNERTRRVTQDRELALKLNKSRAYPDRKALIAFGHRCNVLKPERVFERVDAGMSASLEANRDRVPEQLWQRMKKEWDMSRLGLGLHSISKSLAKNNENRKQYKCKTGDAGKVHG

>Veis_0673_UniProt_A1WFP8
MTGSCDGGGNGVGNGVGDVVLRVQGLSKEYRLYASPRERFKALFGSRARHHSHWALRDVSFELRRGQCLGVVGDNGAGKSSLLKLLAGTLQPSAGRIERQGRVTAILELGAGFHPDFSGRDNLYFGGSLIGISHAAMARLESAIVAFSELGEALDRPVKTYSSGMTVRLAFALVTAIQPDVLIIDEALAVGDQHFQKKCVARITQFRERGCAILFCSHSPYHVRSLCDRALWLAAGSVRALGATEPVLGAYEMHSRLRSAPAAPVGTSAPQGLSPAPDDGGARILSLTLADLGPGEPALLEHADLVATIVVRGRGDEQPNIGFMIEQSRGSGITSLATHEEGAAPVRQADGSWRSVLTFPALPLHSGEYVVSAFLFDASGLVVYDQWLQHLHFRFVSPTLMPGLVRLPHRWS

>Veis_0674_UniProt_A1WFP9
MCAALAADVLAVWRARALLWVLVRREVAARHAGTAAGLVWPYLQPLLTVAAYYLVFDVVFAMRLGAGAPAHAVGTFLIVGALPWMAFCDAVSRGMGSLIDAGSLLQKNALPPVLFATRAVLASAVIYGPLLLALALAYTPLHGWRPAVVAGLLPLLALQLLLGWLLGYLLAIFAAALRDTVQAVGFMLSVGIFLSPILFPLTLFPAAWRWVLWLNPMTALVLGYQQLLLQGNLPPREVWAVAAVWVLLLAWLLDWVLRRSRDQLVDWL

>Veis_0675_UniProt_A1WFQ0
MAAGGHQRKSGGLPPLFFCAPGMGSAVLRCADAATRRVACRVTVSFIFHTNMLLTPRLPLGRAVGAGPLAPLTFLTFLACPAFFFAALVASFIPLMASAQSVLAQGPAGQVTDADVAADAVTRIPDAARATVLSRPGQVGQLAANVYLQRAMALQAERQGLAQGPEAAAALALAREKALADLYLADFDKSHQPDDAALLAYAQSTYRAMDDKQLTAPERIRVRHLLVKEKSPEKRALIEQWLAEAKAGKDFAQLAKDHSEDNASAAQGGDLGFLTDGSTVPPFEQALKALKEPGDLSEVVETSFGYHIIRLEERRPAGLRGFDEMRDPLRLQARNALLREARAKDAQRLQEEMQIDETAVSSFSSRFKPEDAAR

>Veis_0676_UniProt_A1WFQ1
MKKNVLSLSIATMIGSLALSGAASAGVAYGTAAAASTAVTLPATSATDLKVNPNGIGHILLVPYYSVQEGNGTLLSIVNTDTKNGKAVKVRFRGASNSDDVFDFTLLMSPGDVWTANVSKDAASGKAQLFTPDNSCTLPSSAALNSTKFMTARVYGADEAARALETLEGYVEIFNMADIPPKVPATAGEIAQNGTAAIDNPLFTAIKHAPSGDNAGKPACGSGLDKLRSDPTLSNISASTGTAAETDRTNLLKHGLWAPTTGLTGSWTILNIYGASVGWSGNMTAIEARNGTDAPAPGRVVFSAQKSDRVPAADVNLLTADPLLRNKGGATPGTGIIPAVQFDLPDMSTPYLLYGTNASIEAENATAIDLAARGSAPIRQAEALTESLAVQHVINEYITNPKISAATEWVFSMPTRRYAVGVDYTSTATMENPIFNGVSQGVAANAVRGPSDFFTSTNTKMGADGAPKYQACVEPGGDLFVYNQEEAKKDSGGFVISPGVAGKSVNFCGEVSVLGFSTTQALKAKIATKDIDTGGFTSGWMDINTRGLEVANSNPKTYRGLPIIGSAFVKMTGPIAAGKSTNFSITAPHRFSK

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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