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BMC type: RMM2


Organism: Pelagicola litorisediminis. Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

      PEL8287_02577 (fasta) HMMreg00455_1_GRM5 GRM5 (HMM details)
             PEL8287_02578 (fasta) HMMreg00072_4_pdu1d PDU1D (HMM details)
                    PEL8287_02579 (fasta)
                           PEL8287_02580 (fasta)
                                PEL8287_02581 (fasta)
                                     PEL8287_02582 (fasta)
                                          PEL8287_02583 (fasta) HMMnopfamclust3_1 RMM2 (HMM details)
                                                PEL8287_02584 (fasta) HMM01636transf_1_rmm RMM2 (HMM details)
                                                        PEL8287_02585 (fasta) HMM00202amintr_1_rmm RMM2 (HMM details)
                                                                  PEL8287_02586 (fasta) HMMalddh_2_egra RMM2 (HMM details)
                                                                      PEL8287_02587 (fasta) Tdp_cinnamon RMM2 (HMM details)
                                                                        PEL8287_02588 (fasta) HMMnopfamrmm1_2_rmm1 RMM2 (HMM details)
                                                                         PEL8287_02589 (fasta) P_cobaltBlue RMM2 (HMM details)
                                                                          PEL8287_02590 (fasta) H_darkIndigo RMM2 (HMM details)
                                                                              PEL8287_02591 (fasta) Tdp_sepia RMM2 (HMM details)
                                                                                  PEL8287_02592 (fasta) HMM00857isoch_1_buf1 RMM2 (HMM details)
                                                                                                 PEL8287_02593 (fasta) HMMpropdeh1_1_pdu RMM2 (HMM details)
                                                                                                   PEL8287_02594 (fasta) HMMpropdeh2_1_pdu RMM2 (HMM details)
                                                                                                          PEL8287_02595 (fasta)
                                                                                                                PEL8287_02596 (fasta)
                                                                                                                       PEL8287_02597 (fasta)
                                                                                                                              PEL8287_02598 (fasta)
                                                                                                                                            PEL8287_02599 (fasta)
                                                                                                                                                 PEL8287_02600 (fasta) HMMreg00126_1_mix CsomeACh (HMM details)
                                                                                                                                                                 PEL8287_02601 (fasta) HMM01266_1_mic6 MIC6 (HMM details)

BMC shell protein types:

BMC-H(map on tree)

       H_darkIndigo

BMC-P(map on tree)

       P_cobaltBlue

BMC-Tdp(map on tree)

       Tdp_cinnamon
       Tdp_sepia

(complete list of loci)

Protein sequences:

>PEL8287_02577_UniProt_A0A1Y5T0Q6
MSKHEHNILSTVNLRGTISVAELARILDVSDQTIRRIVKPLVERGEVRKVHGALVSTQKVTDPPFLARMNENRPEKVAIANAVAAMVNDGGSVMIDTGSTSAFVAQALEAKQNLTVVTNSAYIASQLALIEGNRVFMAGTQLRNHDAAAFDRAAFEVIGSVSVELAILSASSVHPLRGFLAYDQCEVDIAKAMMEVSAKTVMAVDHTKFNEKGGNASLRLPDLGPQDIVVCDRRPDKAFDNLLDAQNFIEANRYRKIAE

>PEL8287_02578_UniProt_A0A1Y5SW81
MGMPAETFDVLAPAKVLSAAADGAARLFEKNGGCLDRIFGNAGISLEELDSPVSEINLAQYCNMFETAAEQTKNGNIGLQFGRNFLPRQLGMLGYAAISSPTLAAGLRNMETFFPAHQEQTSFGLIQDDGILWLSYRIVDPRIPNRRQDAELSLGMFCNVFRNALGENWSPLEVRFEHAKPDNAHEHETAFGAPVVFNRRTNALAFRRSDLDVKMPGHDPYLFSMVKAFMESRSKTSEDPVNFATVVRNEIKMQLGSSIPALGDIASILGISGPSFQKRLRKHGLSYNDILRAARHELALHYMDDPEIALTEIALNLGYSELSAFSRAFRNWTGMSPQRYRRVSRS

>PEL8287_02579_UniProt_A0A1Y5SWJ7
MTLTRRQFTGRAAAMAGLAVGGPLSPAFAARNDQMNILCWEGYNSDEVLGPFRSANAGATVRAESGTSDPDMINKLRAGETSVWDLINVNQPWARDQLYPEGLIKPLNKDRFMPHFEKMLPEFAAPYPLSFADDGNLIGMPQRYGPFSFVVNTDVISREMAEDQGWNLFLDSKMKDRYGVLTYDNWNVIHMCLTAGLNPFAPVEGDDQAKFKSVAEQIFGGAKLLTDDLVAMNTALINGEIDAYFTGGTYTASPARFDGATNIRAITPKSGPVDGKGGVVWIELTSAVNNPDPSNLAEDFLEFVQSPEISKAVAFTEGTYNPVAQMGNSEVMALFDADELDAIQMDSLAEEMDRSLDYEVVASYDALIEIYTKARRS

>PEL8287_02580_UniProt_A0A1Y5T0U5
MQSQPILRLRQVVKKFGNFTALHGVDLEIEEGEFFTIVGPSGSGKSTMIRLLVGMDELSEGEIWLRDKRIDQTPANLRPTCMVFQSLALFPHMSVGQNIEFPLKLRGAAPADRKARALELLDLLRLPQSYYQKRISECSGGEKQRVALARALAFDPEILFFDEPLSALDYRLRKTLEKELKSLHARTGKTFVYITHSLEEAMVMSDRIAIMREGRFEQISVADEIYGRPVSRFVAEFMGEVNLFDVEGTASDGLHGKGIEIHVNGDTRDFGISLEKGVTGTLMVRPEYVRFLTSSATADFIVRGILRAEYALGSRIQYEVETSAGQTLTVEKLREDRFCGNEGSAVILGFDAENVHLIRGT

>PEL8287_02581_UniProt_A0A1Y5SW98
MERIDRKLGLLSALPLAAILALSFLAPLVVVALFSIMPPKVFDLAHMPNFAAYSVFFDQGYYKSLLWSLGMALISTLILFVICWPLAYGMAKVFGRFSLILTIAVVMSLFVSENIRLFGWVLTLMKGGLIEGHLRAWTGVGYDSPLYNTGIIIFGLVYVYLPFMLFPLAQGISMVPDDTRQAAADLGATRWQILRQIDLPLAAPGIMVGSLLSFVLAAGALAESKILGGQAVIVIADDIETAFTFGQNWPLGAALSVILIIIIGGLAILGVNRIDLDAIMGRKR

>PEL8287_02582_UniProt_A0A1Y5SVR4
MNPSRSTRIALYVYGIATIFFLYVPLLSVGFASVSKARYLSFPIKRYSTKWYGDALQSETVRDLLVTSLKVAVIVTVISMVVAFFGALAFARYNWRYRTLFQKLILLPIFFPQTVLGLALLMWFNSVGIIPTWKTAIVAHLVWIAPIATLIVAIRAYSFDPALEEAARDMGASTMTILREITLPLLMPGIISAGLFAFLLSWGNFPLSLFTTGADSTLPEWLYAKMVSGYSPLVPTLGVMSVVGSFLLILLAFSLNWLIRSVRESRSAEN

>PEL8287_02583_UniProt_A0A1Y5SVS4
MLTSLKGKSVIVTGGSKGIGRGIATVFARQGAKVTITARGEEAMKKAAAEIEGDVSYEICDVSDWDSVQAMVANVARDKGGIDVMCANAGAFPQTKIVDMDPAEWDGVMATNLRSSFLCVKAAIPHFEKAGKGRVVLTSSITGPVTGFPGWAHYGASKSGQLGFLKTAAMELSRYNTTINAVMPGNIYTEGLQDLGQDYLDTMAASIPLKRLGNVEDIGNAALFFASDEAAYITGQQIVVDGGQIIPESLEAIDEI

>PEL8287_02584_UniProt_A0A1Y5SVV6
MSGHDMPLEELLKHLDSLANASLNLWELPEGARARLINVSENATYLVEASGGYKSILRVHRENYHSRRAIECELEWIAALAKADAVITPGHYLGRNGQAIQVGRSKELANPRYMVLFHFVEGSEPDETGDLVGPFEDLGEIAARTHIHSVSWQRPADFERLTWDVDAVFGDNPTWGNWRDGPKVDAGVRNVLEQVEATVKRRLADFGQSPDRYGLIHADMRLANLLIDDGSTRLIDFDDCGFGWFLYDFATGISFMEDDPRVPELKAAWVRGYRKIRPLSDAEEAEIDTFVMLRRLALLAWIGSHIEAPEPQALAPDFARVTAELGAVYLKAFS

>PEL8287_02585_UniProt_A0A1Y5SVG9
MSQAKTEFLERSKTFWNPGKTQDWIDMGVDLVIDRREGYYLYDMDGRRLIDLHLNGGTYNLGHRHPELVEVLKAGTERFDMGNHHFPALARTALAEALQACAPGDHFKYTAYGSGGGEAIDIALKTARHAAQKKKIVSIVKAYHGHTGLAVKTGDERFSKLFLSEDTQGEFIQVPFNDLNAMEDALRGRDVAAVIMETIPATYGFPMPMEGYLPAVKKLCERYDAFYIADEVQTGLMRTGELWGCMKYGVVPDIMVTGKGISGGMYPIACVLISEQCGGWLKEDGFGHISTMGGAELGCVVAMKTLEIVQRPEVRSMVQFIGDYLRAGLNDIMAAFPDFFIGIRQHGVIMGLEFNHEQGAKPVMKHLYENGVWAIFSTLDPRVLQFKPGLLLTQADAEEVLRRVAIAVELARAEVMGNRRRMV

>PEL8287_02586_UniProt_A0A1Y5SVW6
MKPALFNSLIDISDSPAARRGQADLMLEQARWAAAVFDRYDRDTTMRIVDSVAQAAHDHAAEFAEKIVAESGFGVAEHKKIKNELTAKPLVDFYRDQDFVNPRVDEARKIIEIPRPAGVIFALTPSTNPIATLNFKVLMALMTRNAIVLSPHPAVRQTSVEAVRLLARAAEEAGAPTGTIQILPEPTIPVVEAFMNSDKTNVILATGGTAMVRAAYSSGNPAIGVGPGNAPVFVDISADIAKAAQRIVASKSFDNSVLCTNESVLITLPEVESQLKIALKSAGAYICSESETEVLRRFLFHPRGFNIEAIGRDATWIAQECGIRVPGNTKILVAPITQIGVEELLSREKLCPVLALHVAKTKAQALSQARAVLRLTGAGHSAAIHTSDEMSVMDYASAVEVYRVVVNAPCSQGAAGFATNLAPTFTIGTGFFGRSSIGENVGPQHLVHWTRVAYNAGADVPFGNYHGLGRSFRGALPKAPADGVPGSAKAPQPPRQPSAASSIDNATKDELRRLIAAELRDLLRK

>PEL8287_02587_UniProt_A0A1Y5SYP7
MAELRSFIFIDQLQPQTLAYVATWMRGSLPRARMAAQIIEISPGLDIEALTDVALKSANVKAGLLVVERQFGTLEFHSRSTAEVQAGAAAVLQALGARREDAAPPKILASKIVTRVDHQHAFLMNRNRLGSMVLGGESLYLLECQSASYAMLACNEAEKEANIKVIDYRMIGPNGRLYLAGDEAEVRNARNAAEAALRQAGAV

>PEL8287_02588_UniProt_A0A1Y5T117
MEDLRSLIREVLKEELSRLRPDAVPAAARITEEVVSLRSSTDLNEFACRVLNMAQDGRLRADILEGRHRFCLSGQPAVQVEAHQPIAPAPSATPVQQFTRGIVSERDVAALPQGTRRIQVGKPVKFTPLARDEIRRRGIKVERTSS

>PEL8287_02589_UniProt_A0A1Y5SW08
MIRGKVTGRVWSSKHIETMPSGALLEVEVAGSIIVAFDPLGCAEGEEVLITQGSVAAAFFTKQKAPIDALIIGSIDET

>PEL8287_02590_UniProt_A0A1Y5SWW2
MASQAIGMIETRGYVAALTAADAMVKAANVEIAARNEVGGGLVSVVVKGDVGAVKAATEAGAEAASQIGEVVAVHVIPRPHADLGRHFDAAKLK

>PEL8287_02591_UniProt_A0A1Y5T157
MTELRVYLPIKDLQPQFAAYLATPLRARGYPPYEGQNSLIIEVSPALSIHRIADLALKESPDMEPGILFTERQFGLLELHSDDPEELDKAGQAILKGIGAKPGDQLAPKVLFHDIIDDLSDQHAIILNRSRDASILIPGVSLLIYEMAPALFACVAANEAERAAPGAIINDVQMMGASGRIFMSGTHAEMELARDAITATLEAVKGRKT

>PEL8287_02592_UniProt_A0A1Y5SWN2
MSNWKTAYRSFYYENAEEPDDLSLPPEETALLVIDIQNTYLEEPDDKTEAARWQPFFERMNGTVIPNTIALTDWARKAGIEVIFARIACQTDNGRDRSLSQKKPGFNYLLLPKDRADSQIVPELAPQADEITVLKTTDSALTGTNLRLTLHNMGIKNVIVAGIFTDQCISSTVRSLADESFNVVVVENCCAAATADLHHRELEIINMIYCHVVQSDDVFATCPPTR

>PEL8287_02593_UniProt_A0A1Y5SW34
MDTPPAPNRWRRYSDWDERPLRLDKFAQEDAANGFAAFKSPSDPKSDIQISQGRIASMDGVLVHDFDMIDAFIAEHHLDLEIAPEAMAMTSDKLAQMLVDMHVPRAELVRLARGLTPAKLADVVGRLNALELAFAYSKMRPRKTPGNQAHVTNAKDDPLQLAADAAVAVGLGFDELETTMRVSRNSWSNALACVVGSVVGRWGALFQCSSEEAEELRIGMAGFTSYAETVSVYGTEKSFTDGDDTPWSKAFLVAAYASRGIKARCTSGAGAELLMGFHEAKSLLYLEARCLCLQRGMGVQGTQNGGIDGAPLTATIPGGMREMMAENLLAVWLDLECASGNDARATESEIRVGAKIMPYLIAGSDFICSGFGSILSYDNSFNASLFNAEELEDYLVLQRDFEADGGLTPLPETTALDLRTRAVDALSAVLEELELAHPTPQMKASVIVASGSRETQTFSIGEVTRISEAIESRNLSVIDVIRALAKRGFVPEAQNLLNLVKLRVSGDYLQTSAIVRNEHVISAINDPNDYAGPGTGYRLSEARRDEIIGIRDTLGQSEVLSAQARHKKAESKRIVYLETETAVEGKNSSEVVIGISPAFGLQLFQTTGGLNLSEVLNCLVEGVESGGGKARVVRMYHTADTSFLGLSAAKLSGSGIGIGIQAKGTAVIHSSDRLPHNNLELFSNAPITTLEHYRALGHNAALYAFKQEVEPILVPTQGEALGARFHAQVALIHAIETGLVDPNRAPAEVALKFTGKKAGAHQ

>PEL8287_02594_UniProt_A0A1Y5SWT1
MKAPTLADYPLSESQDDSICGPRGVPLNKITLAAVTAGDIEIEDLRISRDALLAQARIARATGRETLARNFERGAELINVPQEVIMQTYEMLRPGRVHSKSALVAQATLLRNEYGAALIADFIDRAAKVYQQRGLFDE

>PEL8287_02595_UniProt_A0A1Y5SX64
MKNLSFLRLSVWFYLAIFFAYLLGPLIIMSATAFNSPDFPRITPWECLTFEWFSALFQDERILNGIKNSVIIGFGTVVLSVAMGLAGALLLTQIWPKLRATYYTIIIAPILIPGVVLGISTLVFWDRINRMLGLGADSFLSNGLFLTIIGQSTFIASYCMLVLVARLQRYDVALTEAALDLGATHAQAFRKVLLPFMRPALASAAVLAFLASFENYNTTTFTFGEYPTLTIELAQKVRYGITPAISALAFIIVVLTVFAALANEAKIKRQQLVLAARQNASIEELKQGIKLPGFLSGNAAAVALVLVSIATVVVVVTATTHSPAQCIADVKEQKRIEAEKLIQELRAKRDANRAKEDNKEDVQQAPKSENNSGFGNVFDPNALSTDN

>PEL8287_02596_UniProt_A0A1Y5SWV5
MPGFLKEFLNRNGTGMGLAILGLVLFWTIVLIILPQVSMLDFSFRPNLPPPEIGGPKDIYTAENYKYLIFGPEGGSQDYNAVDLRVFFRTLVAAICVTIFNLILCYPIAYYLGQTKGNHIRIFALMLIIPYWINEILRAFALRIIFGETGVLNNFFVGLGVFDTPFDFIRNDIALYAGLGYAYILLMIFPIYNVIESLDRNQIEAARDMGASWIKIHRRVVIPYAKPGISSGCTMVFMLSAGALAAPQILGGPSSLWFTQLIYQQFNDNSDWPQGAAYAVVLLVTCILLVLAIMRLFKVNMGDIGK

>PEL8287_02597_UniProt_A0A1Y5SX83
MSAGVGVDLESLWIRFGDFVAVRDANVHINGGDFFSFLGPSGCGKTTILRAVSGFLEPSEGNVLIGGRNMKGIGPNKRPTALIFQNLALFPLMKVWENIAFSMEINGASAAERRKRADELLDMIALPGQGDKLPSELSGGQRQRVAIARALCAEPDVLLLDEPLSALDLKLRQHMRTELREIQKRVGITFIYITHDQGEALTMSDNIAVMREGIIDQIGDGKAIYNDPATAFAASFVGENNVFRGKIKRISGDEALVATNRSGDLVARISTANQGKMKEGDDAMMFIRPEAFAIASKGAKGDHFVTAKVNHEEFEGNSFNIFMEGGGGKELKVTIPNLGQSFKDHTGQSLTLEYEIKNSVVVPAGELAAE

>PEL8287_02598_UniProt_A0A1Y5SZ73
MTAKTNLTRRTVLKGVGATALAAPLYSKSALASSGEVNILMWSDYLPPSFIEAFEAKTGIKVNYTGIGSNEEIINKMKATKGQGFDIVSPTNNRSLQWGPLELLQPFDLSKVNMDAVNPSMSKIGTDAWNFGGNGAHWLPHIWGTEGIAYRTDKWLPAGDAPSYGDVWSEENAGKTMGRAHSMMLGAGLYMEASGEMEPGSVWAAYNDEDTMRKVWGQIADWTIARKNRIKLIWNDADTQKNGLLNEGVVVGQTWDGPPLALKSAGEPVHYQAPVEGAMAWVDGMSMPVGAQNIEQVYAFIDFAYEKEPAGVAIDSHGYNSPVLGADGFSGDTYKKNFAEAYPGDSLANLNPWPAEAPWYADVRTEFVNKFKSA

>PEL8287_02599_UniProt_A0A1Y5SWB4
MDGNDIGKCPVMHGATTFGARSNSDWWPNQLNLRILHQNSALSDPMGANFNYAEEFKKLDLTALKKDLYALMTDSQDWWPADYGHYGGLFIRMAWHSAGTYRTADGRGGASTGSQRFAPLNSWPDNGNLDKARRLLWPIKQKYGNKISWADLMILAGNCAIESMGGKTFGFAGGRADIWEPEEDIYWGAETEWLAPSDSDDSRYSGDRELENPLAAVQMGLIYVNPEGPDGNPDPVASGRDIRETFARMAMNDYETVALTAGGHTFGKMHGAGDPSHVGPEPEAAPLEAMGFGWLSSYKSGKGGDTITSGLDGAWTSNPTQWDMGYFDVLFKYDWELTKTRAGAWIWTPKDIEEADMAPDSADASQKVPVFMTTADMAMRMDPEYEKISRHFHANPDEFADAFARAWFKLTHRDMGPKSRYLGAEVPAEDLIWQDPIPVGPKLSDTDVADLKAKVLATGLTVSQLVQTAWASASTFRGSDKRGGANGARIRLAPQKDWDVNQPAELATVLGALEGVQKDFGKAVSMADLIVIGGAAAIEKAAADAGHDITVPVTTGRGDATQEQTDAESFEPLEPVADGFRNYLKAKYTVSAEELLVDRAQLLTLTAPEMTVLVGGMRVLGANHGGAAHGVLTDQPGKLTNDFFVNILDMSTEWKPVSDDGDVFEGRDRASGDVKWTGTRVDLVFGSNSQLRALAEVYAQDDNQAAFVNDFVAAWTKVMQADRFDLG

>PEL8287_02600_UniProt_A0A1Y5T1J2
MKNLTLKHLRYFQALSLHGHFGRAADTCSISQPALSVQIKELEETLGITLFERGPRQVRLTSFGEEFAMRAREILRAVDDLADLARTSRDVLIGRLRIGIIPTIAPYLLPRIIGDLTQKHTGLDIHVRETMTEKLIHELTEGRLDTAIVALPISEPSLTEVALFKENFVFVRPQEDAEKPVPSSEKLREMRLLLLEEGHCFRDQALSFCNIRSGLPREGLDGSSLSTLVQMVGAGIGVTLIPEMAVPIETRSASVSVAQFKNPQPSRQIGMVWRKTSPLAEQLMQISNIVRQSAEAMQIGQT

>PEL8287_02601_UniProt_A0A1Y5SWG4
MTTLPTTAKAVIIGGGIIGCSTAYHLAKLGWTDTVLLERKKLTSGTTFHAAGLVGQLRSNANITQLLGYSVDLYSKLEEETGLGTGWKMNGGLRLACNEERWTEVKRQATTAHSFGLEMELLTPSEALELWPLMDISDLVGAAFMPTDGQANPSDITQALAKGARMAGASIFEDTKVTDLEVENGRIKAVITDLGRIECEKVIVCAGQWTRSFAKRFGVNVPLVSMEHQYMLTEPMGVPGNLPTLRDPDRLCYYKEEVGGLVMGGYEPNPIPWAVDGIPEGFHYSLLGSNFDHFEQIMEQALGRVPGLQTAGIKTLTNGPESFTPDGNFIIGEAPELKNFFVGAGFNAFGIASGGGAGMVLAEWAKNGEPPFDLWSADIRRFGRPHFDTDWVRTRTVEAYGKHYTMAWPYEEHDSGRPCRKSPLYDVLADAGACFGEKLGWERPNWFADTSRGETPKDVYSFGRQNWFEAVGREHKAARDAAVVFDQTSFAKFALKGPDAVAALNWICANNVDRPVGSLTYTQMLNDKAGIECDLTVGRVAHDEFYIVTGTGFATHDFNWISRNIPEGMNCQLFDITSSNAVLALMGPEARNILEKVTRDDVSNDGFRFGTIRTIGIAGCPVQALRVTYVGELGWELHLPVEYAEAVYAALMQAGRDHGLKNAGYRSLEALRLEKGYRAWGSDIGPDHTPFEAGLGWAVKLGKNIDFKGRAAAQAQKSGGVKKMLACFTVDPDVVLLGRETIYRNGQRVGWLTSGGYGYTVGKSIGLGYVRNPDGVDADYVMSGDYELEVATERVRAQVHMEPLYDPKMLKVRG

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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