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BMC type: RMM2


Organism: Tepidamorphus gemmatus. Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae;


   BMC-P    BMC-H/Hp    BMC-Ts/sp    BMC-Tdp    AldDh    PTAC    signature enzyme    AlcDh    regulator    others    no assignment

       EDC22_105265 (fasta) HMMnopfamclust3_1 RMM2 (HMM details)
                            EDC22_105266 (fasta) HMMpropdeh1_1_pdu RMM2 (HMM details)
                               EDC22_105267 (fasta) HMMpropdeh2_1_pdu RMM2 (HMM details)
                                     EDC22_105268 (fasta) HMM00857isoch_1_buf1 RMM2 (HMM details)
                                               EDC22_105269 (fasta)
                                                        EDC22_105270 (fasta)
                                                               EDC22_105271 (fasta)
                                                                      EDC22_105272 (fasta)
                                                                             EDC22_105273 (fasta) HMMnopfamclust3_1 EUT2x (HMM details)
                                                                                      EDC22_105274 (fasta)
                                                                                             EDC22_105275 (fasta) HMMreg00455_2_PVM RMM2 (HMM details)
                                                                                                        EDC22_105276 (fasta) HMM00202amintr_1_rmm RMM2 (HMM details)
                                                                                                                      EDC22_105277 (fasta) HMMalddh_2_egra RMM2 (HMM details)
                                                                                                                           EDC22_105278 (fasta) Tdp_manilla RMM2 (HMM details)
                                                                                                                              EDC22_105279 (fasta) HMMnopfamrmm1_2_rmm1 RMM2 (HMM details)
                                                                                                                                EDC22_105280 (fasta) P_cobaltBlue RMM2 (HMM details)
                                                                                                                                  EDC22_105281 (fasta) H_darkIndigo RMM1 (HMM details)
                                                                                                                                        EDC22_105282 (fasta) Tdp_butter RMM1 (HMM details)
                                                                                                                                                 EDC22_105283 (fasta) HMM01636transf_1_rmm RMM2 (HMM details)
                                                                                                                                                         EDC22_105284 (fasta)
                                                                                                                                                                EDC22_105285 (fasta)

BMC shell protein types:

BMC-H(map on tree)

       H_darkIndigo

BMC-P(map on tree)

       P_cobaltBlue

BMC-Tdp(map on tree)

       Tdp_manilla
       Tdp_butter

(complete list of loci)

Protein sequences:

>EDC22_105265_UniProt_A0A4R3MAX7
MILAGRVAIVTGAGSGIGRAGAIAMAREGAHVIAADISAARAEETVRLIVEAGGSAEAVETDVADDAQLRRLVETALAARGRIDILHSHAGIQVEGTLEQVDPAGMDASWAMNVRSHFMLARLVMPHMRARGRGSIIVTSSNSGVFYDKEMIAYTTSKHAVIAMVRQIAIDYGRYNVRVNALCPGWVDTPFNEPFIRQMGGRAAIEAYVREKIPLGRWARAEEVAEAILFLASDRSSFMTGHALVLDGGECIA

>EDC22_105266_UniProt_A0A4R3MGJ6
MNEEPPSANRWRRFDDWDRRPLRLDNFALEDPDNGFCAMSGPHDPAPSALVRNGRIVAMDGRDEAEFDMIDLFIARYHLDPAIVEEAMGTDSLEIARRLVDLTTPREELVRLAHGMTPAKLAEVVAHLNALEIAFAYGKMRARATPGNQAHVTNAKDDPLQLAADAATAVAFGFDEIETTMRVSRNAWSNALACCVGAAVGRPGVLFQCSSEEAEELRIGMAGFTSYAETVSVYGTEKSFIDGDDTPWSKAFLAAAYASRGIKMRCTSGAAAELLMGFHERKSLLYLEARCLCMQRAMGVQGTQNGGIDGAPLAAAIPGGVRELMAENLIAVWLDLECASGNDARSSESEIRVGAKILPFLIAGSDLICSGFGSILKYDNSFNPSSFNGEEMEDYLVLQRDFEADGGLTPQGEDRILDLRTRAVDAISAVIAELGLGDPDPAMKRSVVYASGSDETRSYSPGQVAVISEAIRERHITVLDVIRALHVRGFIEEAANLLFIVKLRVSGDYLQTGALVRGGRVISAINDPNRYEGPGSGYRLTAERRREIAAIRGQLDRREVLRAEAAFEAAEAAVIRYRTMGPASAGSDPREIVVGISPAFGTRLFRTLAGHSLARVLAEIIAGIESGGGTARIVRLRHTADTSFLGLSAARLAGSGIGIGLQAKGTAVIHKRDRLPHNNLELFSNAPITTLAHYRGLGENAAAYARGESPEPVVVPQRGEALGARYHGRVALIYAIETSLTTDGATPEEIVLDFLGTAE

>EDC22_105267_UniProt_A0A4R3MBN7
MTKLGTDDYPLAERRPEIVTGRRGKPLDALTIEAVLSGEVTMEDLRITPQALRQQAEIARAAGRPTLAANFERAAELADIPQEVVMRIYELLRPGRARSRAELEAAAAMLRRDHAAPLIAAFVEEAADVYERRGLFAARY

>EDC22_105268_UniProt_A0A4R3MEX5
MSWKTAYRSIYYQDAPEPEDPQLAFAETALLVIDIQNTYLDRPDPAGLSDAERARYDAWTPFHERMRDMVVPRTRDLLERFRKHGIECVFARIATHTRDGRERSLSQKMPGWNNLLLPKDDWPSQLVDPLQPTGDEICVIKTTDSALTGTNLRLMLNNMGIRNVVCCGIFTDQCVSSTVRSLADESFNVIVVEDCCAAGSDELHHKELEIINMIYCHVMSSAELKAIMGID

>EDC22_105269_UniProt_A0A4V2UZC4
MFDRLSRRNFLQQTGIWAAAAAAGSLPRLAHAAREKELNIFCWEGYNSDEVLDPFRREFDATVRAEGLISDPDAINRLRAGEDNVWDLLNVNNPWAREILYPEKLIKPIPRDRFEPYFEKMLPQFHPPYHWAMDDGGTELLGMVQRFGPFSFVVNTDKISREMAEDQGFKLFLDPAMKDRYGVLTYDNWNIYHMCITADIDPFVKHTPEQIAAVGETARQIFNGAKLLTDDLAQMNLALINGEIDAYFTGGTYTASPARFDGATNVRGITPKSGPINGKGGIVWIEVTSVVNNPQVSPLAEEFLSYINRPEVSKAVAFAEGTYNPVTQMGNPEVMALFDEDELDAIQWDTLEEEMERSVDYDINPDYAEMYSLYAAAKRAREG

>EDC22_105270_UniProt_A0A4R3MEN2
MSETSSPFLELVGVTKRFGPFTAVRDVTLSIREGEFFTLVGPSGSGKTTMIRMLVGMERPTSGEIRLQGRVMNDVPANRRPTCMVFQSLALFPHKSVGENIEFSLKIAGVDAPTRRRRAEQLLELLRLPLSYYDKGVNQCSGGERQRIALARALAFDPQILFFDEPLSALDFRLRKTLEKELKDLHRETGKTFVYITHSLEEAMVMSDRIGIMKDGRIVQVGTPHEIYNRPINRFVAQFMGEVNIVEVVSDGNGGVRDVVDGTAYKVASIPEGFGKGHLVIRPEVMKIGRSAIALPNRITGVLFNDYALGSRIQYQVRAGSAETHWLVERLQDERYEGKVNDEVVIGWRPEDSILLSE

>EDC22_105271_UniProt_A0A4R3MB71
MAAERSGDHVSWYRQAGMLCAMPVTIFFIVGFVGPLLMVLAYSFMPPRSFSLFQAPTLANYKAIIADSYYISFLWSFGLACVTVILLFAICYPIAYGMTKLFGRWANLITALIAVPLLISENIRLFGWVLVLVKQGVIDGGLQALFGVELSGMLYTVPAILLGLVYVYLPFMLFPLVIGLSMVPDSLKEAAFDLGANRWQVFREVELPLAMPGILIGGILTFVLALGSLAEAKILGGKAIIMIVDDIENAFTFGQNWPRGSALSVLLIVLSGLIVLFLFRRIDLDRIIGRR

>EDC22_105272_UniProt_A0A4R3MB13
MAQELSRSQRLTRTLIVLWTVAVLAFLYLPMAAVVLASFARQRYFRFPVSDWTTEWYVRTLDSLSIRDLLWTSLTVAALVTVFSVVLAFFSALAFARYDWHGRKLFQRLVLLPVFFPQAVLGLALLLWFSALGITPTWKTAVFAHMVWIVPIVVLIMSIQVYSFDPSLEEAAFDLGASRWQVLREVTLPILAPGIVSGAIFAFLLSWGNFPLSLFTTGADSTVPEWLYAKMVSGYTPQVPALGSLTMSGAAVLLILAYLSWLTLTARRRRLRT

>EDC22_105273_UniProt_A0A4R3MCA6
MLTSIAGKSVIVTGASKGIGRGIARVFANQGAKVLVVARDGAAAGKVAAEIGNGAKGFSADVADWDSAQAMAKAAADAFGGIDILCANAGIYPQTRLEEMDPSEWDQVMATNLKGNFLSVKACLPWLKQSGEGRVILTSSITGPVTGFPGWSHYGASKSGQLGFMRTACIELAKYGITVNAVLPGNIITEGLEGLGEDYLKTMAASIPLKKLGRVEDIGHAALFLASREAGYITGQTIIVDGGQILPESLEAIEQA

>EDC22_105274_UniProt_A0A4R3MD06
MGLRDAITAVSPVRADSAQPRIIAAAATGIVEFIERCGGDVDQIFGNAGIAPELAGATTLKLRLADFCTLFEEASRRTRHDNFGLWFGNQFKPRDLGLWGYAAISAPTLGAGLENLVGLFRYHQDSSTMRLIEGHDGLVRLEYQIEAPGILSRRQDAELSLGMFLNVVRECCGPGWAPEEVHFEHPEPIDSDEHERAFGAPVFFAQPTNALVFRPDILSRPMPGCDLTLMTIMRSCLIELSQVGDRPLDLLDSVRNAVRSRLPRGYPTIEAIAADLRVSTSSIQRALAAQGIQFKELVEATRRDLAMAYLGQRHLPLTEIALLLGYSELSAFSRAMRRWTGVSPRRVRERLHAR

>EDC22_105275_UniProt_A0A4R3MAY8
MSKAERHDRIVAELRAAPAMRVSDLAERLGVSRETIRRDLAELDQKGLISRTYGGAVSPITYEPALAERQALMVEERERIAEAAVALVGRNDILMIGGGATTLHFARRLATEPLPLTVITHAFSIAMTLSANPLIKVLMLPGLYDGREGLIHGADTLDALNRFRANRAFLGASGLTEEGPNDAGIAPAAVYGAMMRRAAATCVLADHSKFERPSLTVYGPWSRLTTLVTDQTPRGALAAALARADVQVIVAGSGAPGVSRA

>EDC22_105276_UniProt_A0A4R3MGK5
MFDYGLFRFASKEDLIEKSIRYWNPDKTRFWQGVGVDLVIDRREGYCLYDMSGRRLIDLHLNGGTYNFGHRHPELVETLKSALDYFDMGNHWFPSVARAALSEKLIAGAPGLSFAVFGAGGAEAVEIALKSARYATKRRKIVSIIKAYHGHSGLSVATGDDRFSKIFLADNPDEFIRVPFNDVDALARALAGNDVAALIMETIPATYGFPMPKDGYLAACRDLCTRHGTIYIADEVQTGLRRTGELWGWQTYGIQPDIFVTAKGLGGGLYPISAAVVNERAGGWLNEDGAAHISTSGGAELGCILAHKVLEMLERPEVIANVKAVTEFFRDGMARMMRRHGDIFVGVRQKGVVLGLEFDHPEGAVFVSRALYEHGIWAIFSSLDKRVLQFKPGVLLSQEMCQEILDRFDAAMPRARELMHSARKAA

>EDC22_105277_UniProt_A0A4R3MBP5
MSVTEDRPRMQVPDAALERGRLMLERARWAAAKLAKMDRPAVMTAVDAAAAAGHARAREFAERAVAETGYGVVAHKVLKNEACSKGIVDLYRSEDFVSPRIDPARKMVELPRPAGVIFALVPVTNPVATVFFKCLLALMTRNAIIISPHPAARRVCAEAAKALAAAATAAGAPDGAIQVIEEPTIPLIESLMSDDRVDLIVATGGPAVVKAAYRSGNPALGVGPGNAPVLVDDTADVAAAARRIVESKSFDNSILCTNESTVLAYEAVADRLLAEFRKAGAHVCTTEESARLRSLLFHEDGFNVDVIGKDAAWIAEKAGFRAPGARILVTPVALVQPEEKLVREKLCPVLAFARVGGLDQAIAAARSMMRRAGRGHSAVVHSTNETTILAFAAAVPALRVVVNVGCSLGAAGFDTHLGPSMTIGTGFVGGSSIGDNLTPQHFVQFARIAYNRSEAVPFGRFEGLDPLRLDDLPPAAPHPAVPQLAAIAGGQIPADALRAELRRLILEELNAVLAA

>EDC22_105278_UniProt_A0A4R3MEY4
MATLRSSIFIDQLQPQTMCYLGTWIRGSLPRTNMAAQIIEVAPGLDIEPLTDTALKEAEVRGGILVVERQFGYLEFHSRSTAAVKAAAQAVLRALGLSETDAIRPKILASKIVTRIDPMHAFLINRNKGGSMILGGETLFVLETEPAAYAILAANEAEKAANIKIVDYRMIGATGRVYLSGSEAEVRAAATAAETALELVA

>EDC22_105279_UniProt_A0A4V6NZQ1
MKESELRAMIREVLGELLKARRPLQAAIAPVVEPVQIASDADLAAFVARLIGRLDDPASGAALRAGHHRFTLARPVPAAGPVSADAPVAAGSANMVLAGTVTEARIAKLEPGTRVMLAPGAVMTPLARDKARARGVVIERRR

>EDC22_105280_UniProt_A0A4R3MEN8
MLRATVTGRIWSTKRLKEVPAGSILEVVVDGSSTRLLAFDPLGCGEGESVIVATGSVAAAWFPGEAPPIDALIIGSIDEAASARTGK

>EDC22_105281_UniProt_A0A4R3MB80
MSSNAIGMIETKGYVAALAAADAMVKAANVSIIGREEVGDGLVAVIINGDVGAVKAATEAGAEVAGQVGTLVSVHVIPRPHADVSKHFTAGGGAK

>EDC22_105282_UniProt_A0A4R3MB24
MARTAQKAAAATSSPAAKGELRVYLMVEDLQPQFAAYMGSPTRARGYPPLAGQHALIIEVAPGLMIERVTDIALKSDPDLEPGILFVERQFGILEIHGDDRSALERAGRAVLKGIGLTEGDQLRPRILYSDVIEDIADQHAVIINRTRQASMVMPGETLLICEMVPALYAAIAANEAERLAPGLTLVDVQMIGAAGRIYLSGRSADVAKARAGIEAVLASIGGRDA

>EDC22_105283_UniProt_A0A4R3MCB6
MTEVHPDTHGFDSLPHARQLDCLAELARTATANYPIPADVSVTLVNLSENATYKVEHAATGRRWALRVHRDGYHSDTAIASELAWLIDLRQSGVVTTPVPVPGHDGELIQKVGHPAMARPRNVVLFNWESGAEPGVNEDLRKPFEVLGEVTARMHRHVRTWRRPAWFERLTWDFETSLGERPHWGRWRDGMGMDDKKLDIFAHTVELIGHRLAAFGKSEDRFGLIHCDLRLANLLVDGSEVKVIDFDDCGFSWLMYDAATPVSFYEHLPEVPDLVRHWLVGYRRVIDLPQADEDEIGTFIMLRRLLLVAWIGSHSETELAQSMGVDYTEGTVPLCRTYLKNFG

>EDC22_105284_UniProt_A0A4R3MD15
MSDPFYRPVSGFDLPRFAGVPTFMRLPHVPLDDPRIREVAIGIIGAPWDGGTTNRPGPRHGPRQLRDLSTMIRAANGATGVRPFDMVNCADLGDVGPNPADVADSLERFTRYFRRVRDAGIVPLTAGGDHLCTLPILRALAADGPIGMIHFDSHTDLFHSYFDGCRYTHGTPFRRAVEEGLLDPKRVVMIGIRGTTYDTEDRDFARSVGIRVIPIEEYFRRGVADVMVEAREIAGTGPTYVSYDIDFVDPAFAPGTGTPEVGGPNSFEALQVVRALDGVNIIGADLVEVSPPFDPSGATAWLGVSIMFELLCVMAPRVAARRATS

>EDC22_105285_UniProt_A0A4R3MAZ6
MSTKTRFRPERVDFSRFSPKHFKWELDDGVATITLNRPERKNPLTFESYAELRDTFHDLRHAPDVKVVVITGAGGNFCSGGDVHEIIGPLVEMQLAGDMDGLLAFTRMTGDLVKEMRTCPQPIIAAIDGVCAGAGAIIAMASDMRIGTPDSKVAFLFVRVGLAGADMGACNILPRIIGAGRASELLYTGRAIDGAEAERWGFYNRLAPSETVLEEARTLARSLRTGPTFAHAMTKKCIHQEWSMGIDEAIEAEAQAQAICMQTKDYERAYRAFVAKQRPVFEGN

msu.edu Reference: BMC Caller: a webtool to identify and analyze bacterial microcompartment types in sequence data
Sutter M & Kerfeld CA; Biology Direct 17, 9 (2022)
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